CX674313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_THISH (Protein recA OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=recA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.545e-40 Identity = 84/135 (62.22%), Postives = 99/135 (73.33%), Query Frame = 3 Query: 411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 +EN K AL AL QI FGKG++M +G S R V +STGS ALDIALG GGLPKGRVVEIYGPE+SGKTTL L VIAE Q+QGG F+DAEHALDP AE +GV ++LL++QPD GEQAL + D L+ Sbjct: 2 DENRKK---ALSAALGQIERQFGKGAVMRMGDSTAVRDVEAISTGSLALDIALGIGGLPKGRVVEIYGPESSGKTTLTLQVIAECQKQGGTAAFVDAEHALDPGYAEKLGVNVDDLLVSQPDTGEQALEIADMLV 133
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_SYMTH (Protein recA OS=Symbiobacterium thermophilum GN=recA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.545e-40 Identity = 79/129 (61.24%), Postives = 99/129 (76.74%), Query Frame = 3 Query: 429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 K A+ AL QI FGKGSIM LG ++ +V V+ TGS ALD+ALG GGLP+GR+ EIYGPE+SGKTT+ALHVIAEAQ+ GG F+DAEHALDP A+ +GV +NLL++QPD GEQAL + +TL+ Sbjct: 7 KQKAIDMALAQIEKQFGKGSIMRLGEQMSRLNVEVIPTGSVALDVALGVGGLPRGRITEIYGPESSGKTTVALHVIAEAQKMGGVAAFVDAEHALDPVYAQALGVDIDNLLVSQPDTGEQALEITETLV 135
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_PARL1 (Protein recA OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=recA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.545e-40 Identity = 81/131 (61.83%), Postives = 99/131 (75.57%), Query Frame = 3 Query: 423 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 S K AL AL QI SFGKGSIM LG++ + VSTGS LDIALG GGLP+GR++EIYGPE+SGKTTLAL +AEAQ+ GG C F+DAEHALDP A +GV+ ++LL++QPD GEQAL + DTL+ Sbjct: 13 SDKKKALDAALSQIERSFGKGSIMRLGKNEQIVEIESVSTGSLGLDIALGIGGLPRGRIIEIYGPESSGKTTLALQTVAEAQKSGGVCAFVDAEHALDPIYARKLGVQLDDLLISQPDTGEQALEIADTLV 143
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_LEGPN (Protein recA OS=Legionella pneumophila GN=recA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.545e-40 Identity = 83/135 (61.48%), Postives = 98/135 (72.59%), Query Frame = 3 Query: 411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 EEN K AL A+ QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEIYGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++QPD GEQAL + D L+ Sbjct: 2 EENKQK---ALSAAVSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQALEITDMLV 133
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RHORT (Protein recA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=recA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.548e-40 Identity = 79/135 (58.52%), Postives = 103/135 (76.30%), Query Frame = 3 Query: 411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 +++ K AL+ A+ QI +FGKGSIM LG+ + + +STGS LDIALG GGLP+GR+VEIYGPE+SGKTTLALHV+AEAQ++GG C F+DAEHA DP A +GV ++LL++QPD GEQAL + DTL+ Sbjct: 10 DKDTMDKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPRGRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQPDTGEQALEIADTLV 144
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_PARDE (Protein recA OS=Paracoccus denitrificans GN=recA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.548e-40 Identity = 79/135 (58.52%), Postives = 98/135 (72.59%), Query Frame = 3 Query: 411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 ++ + K AL AL QI FGKGSIM LG + STGS LDIALG GGLPKGR++EI+GPE+SGKTTL LHV+AE Q++GG C F+DAEHALDP A+ +GV + LL++QPD GEQAL +VDTL+ Sbjct: 11 DKRSADKQKALDSALAQIERQFGKGSIMKLGADNPVAEIEATSTGSLGLDIALGIGGLPKGRIIEIFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTGEQALEIVDTLV 145
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_DESAH (Protein recA OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=recA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.458e-39 Identity = 82/132 (62.12%), Postives = 101/132 (76.52%), Query Frame = 3 Query: 420 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 +++KD A+Q A+ QI FGKGSIM LG + VP++STGS ALD ALG GG P+GRV+EIYGPE+SGKTTLALH +AEAQRQGG FIDAEHALD + A +GV + LL++QPD GEQAL +VD L+ Sbjct: 4 LTEKDKAIQTAMGQIERQFGKGSIMKLGAREI-QAVPIISTGSLALDKALGVGGFPRGRVIEIYGPESSGKTTLALHAVAEAQRQGGIAAFIDAEHALDVAYARRLGVNCDELLVSQPDTGEQALEIVDMLV 134
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RUBXD (Protein recA OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=recA PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.487e-39 Identity = 82/129 (63.57%), Postives = 98/129 (75.97%), Query Frame = 3 Query: 429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 K AL A+ QI FGKGSIM +G + + V +STGS ALD+ALG GG+P+GR+VEI+GPE+SGKTTLALH+IAEAQR GG FIDAEHALDP+ AE IGV ENL +QPD GEQAL + DTL+ Sbjct: 5 KSKALDTAVSQIERQFGKGSIMRMGDRASQK-VASISTGSLALDLALGVGGVPRGRIVEIFGPESSGKTTLALHIIAEAQRAGGLAAFIDAEHALDPTYAEAIGVDLENLYFSQPDSGEQALEIADTLV 132
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_SACD2 (Protein recA OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=recA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.248e-39 Identity = 80/131 (61.07%), Postives = 99/131 (75.57%), Query Frame = 3 Query: 423 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 + K AL+ AL QI FGKG++M LG + +P +STGS LD+ALG GGLPKGR+VEIYGPE+SGKTTL L VIAEAQRQGG C F+DAEHALDP AE +GV ++L+++QPD GEQAL + D L+ Sbjct: 3 ASKSKALEAALSQIDRQFGKGTVMRLGDKGREK-MPAISTGSLGLDVALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNGEQALEVADMLV 132
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_HELMI (Protein recA OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=recA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.540e-39 Identity = 78/126 (61.90%), Postives = 98/126 (77.78%), Query Frame = 3 Query: 438 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815 ALQQAL+ I +FGKGSIM LG + V V+ TGS ALD+ALG GG+P+GR+VE+YGPE+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP A +GV +NLL++QPD GEQAL + + L+ Sbjct: 10 ALQQALNSIEKAFGKGSIMRLGEASAKLLVEVIPTGSIALDMALGIGGVPRGRIVEVYGPESSGKTTVALHIIAEAQKMGGMAAFIDAEHALDPVYARNLGVDIDNLLVSQPDTGEQALEICEALV 135 The following BLAST results are available for this feature:
BLAST of CX674313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674313 ID=CX674313; Name=CX674313; organism=Citrus sinensis; type=EST; length=816bpback to top |