CX674313

Overview
NameCX674313
Unique NameCX674313
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_WOLPM (Protein recA OS=Wolbachia pipientis wMel GN=recA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.612e-38
Identity = 80/135 (59.26%), Postives = 103/135 (76.30%), Query Frame = 3
Query:  411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            EE  S K  AL  A+ QI  +FGKG+IM L ++   + +  +STGS ALD ALG GGLPKGR++EI+GPE+SGKTTLALHVIAEAQ++GG C FIDAEHALD   A  +GV T++L+++QPD GEQAL +V+ L+
Sbjct:    6 EERNSDKQKALDNAISQIEKAFGKGAIMKLKQNPVEK-IDTISTGSIALDSALGVGGLPKGRIIEIFGPESSGKTTLALHVIAEAQKKGGSCAFIDAEHALDVLYARKLGVSTDDLVISQPDTGEQALHIVEYLV 139          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RICM5 (Protein recA OS=Rickettsia massiliae (strain Mtu5) GN=recA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.612e-38
Identity = 80/131 (61.07%), Postives = 102/131 (77.86%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPV--VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K+ A+  AL QI  S+GKGS+M LG+     HV +  VSTGS  LDIALG GG+PKGR++EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV  + L+++QPD GEQAL + DTLI
Sbjct:    6 KERAIAAALAQIEKSYGKGSVMKLGQRP---HVDIEAVSTGSLGLDIALGIGGIPKGRIIEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDTGEQALEIADTLI 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RALEH (Protein recA OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=recA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.612e-38
Identity = 81/131 (61.83%), Postives = 95/131 (72.52%), Query Frame = 3
Query:  423 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            ++K  AL  AL QI   FGKGSIM LG     + + VVSTGS  LDIALG GGLP+GRVVEIYGPE+SGKTTL L V+AE Q+ GG C FIDAEHALD S A  +GV   +LL++QPD GEQAL + D L+
Sbjct:   12 AEKQKALAAALSQIEKQFGKGSIMRLGDGEVEKDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVSYANKLGVNVGDLLISQPDTGEQALEITDALV 142          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_PSYWF (Protein recA OS=Psychrobacter sp. (strain PRwf-1) GN=recA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.612e-38
Identity = 81/129 (62.79%), Postives = 95/129 (73.64%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K  AL+ AL QI   FGK +IM LG +     V VVSTGS  LDIALG GGLPKGR++EIYGPE+SGKTTL L  IAE Q+QGG C FIDAEHALDP  A  +GV T++LL++QPD GEQAL + D L+
Sbjct:    5 KAKALKAALGQIEKQFGKNTIMHLGDNSATLDVDVVSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLTLQAIAECQKQGGTCAFIDAEHALDPIYARKLGVNTDDLLVSQPDNGEQALEITDMLV 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_MYCA9 (Protein recA OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=recA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.612e-38
Identity = 79/129 (61.24%), Postives = 100/129 (77.52%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            ++ AL+ AL QI  SFGKGS+M LG  V  + + V+ TGS ALD+ALG GGLP+GRV+EIYGPE+SGKTT+ALH +A AQR GG   FIDAEHALDP  A+ +GV T++LL++QPD GEQAL + D L+
Sbjct:    7 REKALELALAQIDKSFGKGSVMRLGDEVR-QPISVIPTGSIALDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLV 134          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RICCN (Protein recA OS=Rickettsia conorii GN=recA PE=3 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 2.105e-38
Identity = 80/131 (61.07%), Postives = 102/131 (77.86%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPV--VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K+ A+  AL QI  S+GKGS+M LG+     HV +  VSTGS  LDIALG GG+PKGR++EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV  + L+++QPD GEQAL + DTLI
Sbjct:    6 KERAIAAALAQIEKSYGKGSVMKLGQRP---HVDIEAVSTGSLGLDIALGIGGVPKGRIIEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDTGEQALEIADTLI 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RICAE (Protein recA OS=Rickettsia africae (strain ESF-5) GN=recA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.105e-38
Identity = 80/131 (61.07%), Postives = 102/131 (77.86%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPV--VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K+ A+  AL QI  S+GKGS+M LG+     HV +  VSTGS  LDIALG GG+PKGR++EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV  + L+++QPD GEQAL + DTLI
Sbjct:    6 KERAIAAALAQIEKSYGKGSVMKLGQRP---HVDIEAVSTGSLGLDIALGIGGVPKGRIIEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDTGEQALEIADTLI 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_PROAC (Protein recA OS=Propionibacterium acnes GN=recA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.105e-38
Identity = 79/129 (61.24%), Postives = 97/129 (75.19%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            ++ AL  AL QI    GKGSIM LG   T + +  + TGS ALD+ALG GGLP+GR+VEIYGPE+SGKTT+ALH IA AQ +GG C FIDAEHALDP  A  +GV T++LL++QPD GEQAL + DTL+
Sbjct:    7 REKALATALQQIEKQHGKGSIMRLGEQETVK-IAAIPTGSVALDVALGVGGLPRGRIVEIYGPESSGKTTVALHAIANAQAEGGICAFIDAEHALDPEYARKLGVDTDSLLVSQPDNGEQALEIADTLV 134          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_COLP3 (Protein recA OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=recA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.105e-38
Identity = 85/128 (66.41%), Postives = 94/128 (73.44%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTL 812
            K+ AL  AL QI   FGKGSIM LG + T   V  +STGS  LDIALG GGLP GRVVEIYGPE+SGKTTL L VIAEAQR G  C FIDAEHALDP  AE +GV  + LL++QPD GEQAL +VD L
Sbjct:    5 KEKALSAALAQIERQFGKGSIMKLGDNTT-MDVETISTGSLGLDIALGAGGLPMGRVVEIYGPESSGKTTLTLEVIAEAQRNGKVCAFIDAEHALDPVYAEKLGVNIDELLISQPDTGEQALEIVDML 131          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_CAUCR (Protein recA OS=Caulobacter crescentus GN=recA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.105e-38
Identity = 81/129 (62.79%), Postives = 97/129 (75.19%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K  AL+ AL QI  +FGKGS+M LG       +  VSTGS  LDIALG GGLPKGR+VE+YGPE+SGKTTLALHV+AE Q+ GG   F+DAEHALDPS A  +GV  +NLL++QPD GEQAL + DTL+
Sbjct:   17 KQRALEAALAQIDRAFGKGSVMKLGEKGKVE-IESVSTGSLGLDIALGIGGLPKGRIVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPDNGEQALEITDTLV 144          
The following BLAST results are available for this feature:
BLAST of CX674313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RECA_WOLPM1.612e-3859.26Protein recA OS=Wolbachia pipientis wMel GN=recA P... [more]
RECA_RICM51.612e-3861.07Protein recA OS=Rickettsia massiliae (strain Mtu5)... [more]
RECA_RALEH1.612e-3861.83Protein recA OS=Ralstonia eutropha (strain ATCC 17... [more]
RECA_PSYWF1.612e-3862.79Protein recA OS=Psychrobacter sp. (strain PRwf-1) ... [more]
RECA_MYCA91.612e-3861.24Protein recA OS=Mycobacterium abscessus (strain AT... [more]
RECA_RICCN2.105e-3861.07Protein recA OS=Rickettsia conorii GN=recA PE=3 SV... [more]
RECA_RICAE2.105e-3861.07Protein recA OS=Rickettsia africae (strain ESF-5) ... [more]
RECA_PROAC2.105e-3861.24Protein recA OS=Propionibacterium acnes GN=recA PE... [more]
RECA_COLP32.105e-3866.41Protein recA OS=Colwellia psychrerythraea (strain ... [more]
RECA_CAUCR2.105e-3862.79Protein recA OS=Caulobacter crescentus GN=recA PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_5F09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5F09-K17-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674313 ID=CX674313; Name=CX674313; organism=Citrus sinensis; type=EST; length=816bp
GTCACATACAGTGTTTCTGTGTGGGAGTGGGGCACTTGAACCAGAGAAAA
TATTAAAATAGTTTCAGTAAAAAGGGACGGAACCCAAAAGTCCAAAACCC
CCAAAACCCTAAGAACATAAACAATAAACACACCACACGTTCAATACTTT
GGTATTAAATGGAATAAATTGTAGTTGTTCACCATTAATTTTTTTGTTGC
CATTTATTTTTGGTTAGTTTTGGTTTGTGAGTCTCCATGGCGAGGCTCCT
TCGAAACGCTTCTTTACTTAGACGCTGTCTTCTCTCAGTCTCACCACCAC
ACCCACATCCACAGAGCTTTAGGGGAGGGATGTTGGAAACTTCTACTCAG
ATTTGCAACTTTTCTTCCAAAAGTAAAAGAAAGTCTAAGTCTGATGGGAG
TGACTCTGGTGAAGAGAATATGTCCAAGAAAGATCTAGCCCTACAACAAG
CATTGGATCAGATTACTAGCTCATTTGGGAAAGGGTCTATTATGTGGCTT
GGTCGGTCTGTCACTCCCAGACATGTTCCCGTTGTGTCCACAGGTTCTTT
TGCACTTGATATAGCACTAGGAACTGGTGGACTTCCAAAGGGACGTGTTG
TTGAGATATATGGTCCTGAGGCTTCTGGGAAAACAACTCTTGCTCTACAT
GTAATTGCTGAAGCACAAAGACAAGGAGGTTACTGTGTTTTTATCGATGC
TGAGCATGCTCTTGATCCATCTCTAGCTGAGACTATTGGAGTAAAGACAG
AGAATTTGCTTCTTGCACAACCTGATTGTGGTGAACAGGCTCTCAGTCTT
GTGGATACGCTGATCC
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