CX674309

Overview
NameCX674309
Unique NameCX674309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: DJC18_MOUSE (DnaJ homolog subfamily C member 18 OS=Mus musculus GN=Dnajc18 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14
Identity = 66/226 (29.20%), Postives = 101/226 (44.69%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQ-PRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPPARTQF-------------RHFNFGQGVATGTADRNGSDGFNLRAXXXXXXXXXXXXXXXXXSSDPIYALSRSYPYEYKFTTER---GVNFYVKSSKFEQDYPVGSVQRVRLEKQVEKDYFTILAQNCRLEIQRQ 623
            KAY+KL+LK HPDKN APGA EAFKA+  AF  LSN + R +YD  G ++  +  PR     AR ++ +  +++DI  EE+F  FF G  P                   RH +          D++ +                        +++P Y+L       Y  + E     V ++V    F++ Y   S++   LEK +EKDY   +  +C  E Q++
Sbjct:  100 KAYKKLALKFHPDKNCAPGATEAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTVPR-----ARSYHYYKDFEADISPEELFNVFFGGHFPSGNIHMFSNVTDDSQYYRRRHRHERTQTHKREEDKSQTPYSAFVQLLPVLVIVTISVITQLLAANPPYSLFYKSTLGYTISRETQNLQVPYFV-DKNFDKAYRGASLR--DLEKTIEKDYIDYIQTSCWKEKQQK 317          
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: DJC18_HUMAN (DnaJ homolog subfamily C member 18 OS=Homo sapiens GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY-QPRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPP 269
            KAYRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +  PR     AR +N +  +++DI  EE+F N FFGG  P
Sbjct:  100 KAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPR-----ARPYNYYRDFEADITPEELF-NVFFGGHFP 185          
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: DJC18_BOVIN (DnaJ homolog subfamily C member 18 OS=Bos taurus GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY-QPRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPP 269
            KAYRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +  PR     AR +N +  +++DI  EE+F N FFGG  P
Sbjct:  100 KAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPR-----ARPYNYYRDFETDITPEELF-NVFFGGHFP 185          
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: DJC18_MACFA (DnaJ homolog subfamily C member 18 OS=Macaca fascicularis GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13
Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY-QPRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPP 269
            KAYRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +  PR     AR +N +  +++DI  EE+  N FFGG  P
Sbjct:  100 KAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPR-----ARPYNYYRDFEADITPEEL-SNVFFGGHFP 185          
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: YNF5_SCHPO (Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe GN=SPBC17A3.05c PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 45/114 (39.47%), Postives = 61/114 (53.51%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAAR-----------GFNGFYDSDIDAEEIFRN------------FFFGGMPPAR 275
            K+Y+KL+L++HPDKN AP A+EAFK VSKAFQ LS+   R  YD TG D     P +   AA            GF+ +  +++  E++F +            FFFGG P  R
Sbjct:  131 KSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYDRTGMD-----PESRASAASSSFSSNAGGHPGFSAYPQANMSPEDLFNSFFGDQFFSGPGTFFFGGGPGIR 239          
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: HLJ1_YEAST (Protein HLJ1 OS=Saccharomyces cerevisiae GN=HLJ1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11
Identity = 51/132 (38.64%), Postives = 64/132 (48.48%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDI---DAEEIFRNFFFGGM---PPARTQFRHFNFGQ--------GVATGTADRNGSDGFNL 356
            KAYRKL++K+HPDKN  P A EAFK +++AF+ LSN+E R  YD  G D P  +      AA GF G           E++F N  FGG    PP       FN G         G +  T    G  GF +
Sbjct:   39 KAYRKLAIKLHPDKNSHPKAGEAFKVINRAFEVLSNEEKRSIYDRIGRD-PDDRQMPSRGAASGFRGSAGGSPMGGGFEDMFFNSRFGGQRAGPPEDIFDFLFNAGGSPFGASPFGPSASTFSFGGPGGFRV 169          
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11
Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA-EEIFRNFFFGG 260
            KAYRKLS K HPD NK  GA+E FK +S+A++ LS++  R  YD  G D P        +   G  GF  SD    E+IF +FF GG
Sbjct:   23 KAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGP--------QGGFGSQGFGGSDFGGFEDIFSSFFGGG 101          
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11
Identity = 40/95 (42.11%), Postives = 49/95 (51.58%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 260
            KAYRKLS K HPD NK P A E FK + +A++ LS+D+ R  YD  G  +P           +GF GF   D D          E+IF  FF GG
Sbjct:   23 KAYRKLSKKYHPDVNKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGQADP----------NQGFGGFRSDDFDLGGFSGFGGFEDIFNTFFGGG 107          
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11
Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA-EEIFRNFFFGG 260
            KAYRKLS K HPD NK  GA+E FK +S+A++ LS++  R  YD  G D P        +   G  GF  SD    E+IF +FF GG
Sbjct:   23 KAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYDQFGHDGP--------QGGFGSQGFGGSDFGGFEDIFSSFFGGG 101          
BLAST of CX674309 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11
Identity = 46/114 (40.35%), Postives = 55/114 (48.25%), Query Frame = 3
Query:    3 KAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMPPARTQFRHFNFGQGVATGTADRNGSD 344
            K+YRKL+LK HPD+NK PGAEE FK +S+A+  LS+ E R +YD  G                G NG Y     AE+IFR   F G       F    FG         R GSD
Sbjct:   24 KSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQYDRFGH--------------AGINGQY----TAEDIFRGADFSGFGDIFEMF----FGGSRRGPRGPRRGSD 115          
The following BLAST results are available for this feature:
BLAST of CX674309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
DJC18_MOUSE1.938e-1429.20DnaJ homolog subfamily C member 18 OS=Mus musculus... [more]
DJC18_HUMAN1.938e-1450.00DnaJ homolog subfamily C member 18 OS=Homo sapiens... [more]
DJC18_BOVIN1.938e-1450.00DnaJ homolog subfamily C member 18 OS=Bos taurus G... [more]
DJC18_MACFA1.256e-1348.91DnaJ homolog subfamily C member 18 OS=Macaca fasci... [more]
YNF5_SCHPO1.063e-1239.47Uncharacterized J domain-containing protein C17A3.... [more]
HLJ1_YEAST1.536e-1138.64Protein HLJ1 OS=Saccharomyces cerevisiae GN=HLJ1 P... [more]
DNAJ_STAES1.536e-1145.98Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_BACST1.536e-1142.11Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ_STAEQ2.005e-1145.98Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_METTE4.468e-1140.35Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_5F07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5F07-K13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674309 ID=CX674309; Name=CX674309; organism=Citrus sinensis; type=EST; length=772bp
GGAAAGCTTATAGAAAATTATCGCTGAAGGTTCATCCCGATAAGAACAAA
GCTCCAGGCGCCGAAGAAGCCTTTAAAGCGGTATCAAAGGCGTTTCAGTG
TTTGAGCAACGATGAGAGTCGGAAAAAATATGATATTACTGGGTCAGATG
AGCCCGTTTATCAGCCACGGACTCATACTCGGGCCGCCCGTGGGTTTAAC
GGGTTTTATGATTCGGATATTGATGCTGAGGAGATTTTTAGGAACTTTTT
CTTCGGGGGTATGCCGCCAGCCAGGACTCAGTTTCGGCATTTTAATTTCG
GGCAGGGAGTGGCCACGGGAACGGCTGATCGTAATGGCTCCGATGGGTTT
AATTTACGTGCCTTGATTCAGTTGTTGCCTGTGATTTTGATAATTCTCTT
GCAGTTTTTGCCGTCTTCTGATCCAATTTATGCCTTGTCGAGGTCTTACC
CTTATGAGTACAAGTTTACAACGGAAAGAGGGGTGAATTTTTATGTGAAG
TCTAGCAAATTTGAGCAGGACTATCCGGTGGGTAGTGTTCAGAGAGTGAG
GCTGGAAAAGCAAGTTGAAAAGGATTACTTTACTATTCTTGCACAGAATT
GCCGGTTAGAGATTCAGCGGCAGCAGTGGGGTTTTATAAAGGAGACTCCC
CATTGTGACATGTGGCAGAAGTTTCAGTATTCACCAGCTTGATGAGTCGA
ATCAAGATTGCTTATCTGGTCTACTTGTTCAACATTTGCCATTTTGAAGA
TCAAATATAGCTTTTGAAATCT
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