CX674306

Overview
NameCX674306
Unique NameCX674306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_DROOR (Histone H4 OS=Drosophila orena GN=His4 PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_DROME (Histone H4 OS=Drosophila melanogaster GN=His4 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_DROMA (Histone H4 OS=Drosophila mauritiana GN=His4 PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_DROHY (Histone H4 OS=Drosophila hydei GN=His4 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_DROER (Histone H4 OS=Drosophila erecta GN=His4 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_CHITH (Histone H4 OS=Chironomus thummi thummi GN=His4 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_CHICK (Histone H4 OS=Gallus gallus GN=H4-I PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_CHAVR (Histone H4 OS=Chaetopterus variopedatus PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_CAIMO (Histone H4 OS=Cairina moschata PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of CX674306 vs. ExPASy Swiss-Prot
Match: H4_BOVIN (Histone H4 OS=Bos taurus PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = -1 
Query:  162 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 395
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
The following BLAST results are available for this feature:
BLAST of CX674306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_DROOR1.962e-3697.44Histone H4 OS=Drosophila orena GN=His4 PE=3 SV=3[more]
H4_DROME1.962e-3697.44Histone H4 OS=Drosophila melanogaster GN=His4 PE=1... [more]
H4_DROMA1.962e-3697.44Histone H4 OS=Drosophila mauritiana GN=His4 PE=3 S... [more]
H4_DROHY1.962e-3697.44Histone H4 OS=Drosophila hydei GN=His4 PE=3 SV=2[more]
H4_DROER1.962e-3697.44Histone H4 OS=Drosophila erecta GN=His4 PE=3 SV=2[more]
H4_CHITH1.962e-3697.44Histone H4 OS=Chironomus thummi thummi GN=His4 PE=... [more]
H4_CHICK1.962e-3697.44Histone H4 OS=Gallus gallus GN=H4-I PE=1 SV=2[more]
H4_CHAVR1.962e-3697.44Histone H4 OS=Chaetopterus variopedatus PE=3 SV=3[more]
H4_CAIMO1.962e-3697.44Histone H4 OS=Cairina moschata PE=3 SV=2[more]
H4_BOVIN1.962e-3697.44Histone H4 OS=Bos taurus PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_5F06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5F06-K11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674306 ID=CX674306; Name=CX674306; organism=Citrus sinensis; type=EST; length=533bp
TTTTTTTGCCTCAAATATAAAGATAAGATTTAACTTGATAGAATTACAAA
GCAGCAACCTAATAACAAACTACTAAGAGCCCCATCTACCAGATCAAGAT
CTAGAGTCAAGATCTATTAACATTCAATTCCAGAACCCTAAGACAATTAA
CCCCCAAATCCATAAAGAGTCCTGCCCTGCCTCTTGAGAGCGTAAACGAC
GTCCATCGCGGTCACGGTCTTTCTCCTGGCGTGCTCAGTGTAGGTCACGG
CGTCACGGATGACGTTCTCCAAGAATATCTTCAGGACGCCACGTGTCTCC
TCGTAGATCAAGCCACTGATACGCTTGACTCCACCTCTACGAGCCAAACG
CCGGATTGCTGGCTTTGTGATACCCTGAATGTTATCGCGAAGCACCTTAC
GGTGACGCTTGGCGCCTCCTTTTCCCAATCCCTTGCCTCCCTTACCGCGC
CCAGACATTTTAGCGAGGAACTTAAAAGACTTTCCGCTGTTCCTTGAAAG
AGAATTTGGATAGAGAAATTTGAATGTGCCCCT
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