CX043280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_VOLCA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Volvox carteri GN=PSBO PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.692e-60 Identity = 117/184 (63.59%), Postives = 133/184 (72.28%), Query Frame = -3 Query: 174 VNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLEQ 725 V K +F TKLMTRLTYTLD + G +V DG+ + E+DGIDYAA TVQL GGERV FLFTIKQ G +N G+F+VPSYRGSSFLDPKGRGGSTGYDNA+ALPA R D E+L KEN+K+T G SV K TGE+ GVFESIQP DTDLGAK PKD+KI G+WY QL Q Sbjct: 112 VFKGGETEFVKTKLMTRLTYTLDAMSGTLKVGSDGSAELKEEDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQLSQ 293
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 6.127e-60 Identity = 115/180 (63.89%), Postives = 134/180 (74.44%), Query Frame = -3 Query: 180 KNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQL 719 K +F+ TKLMTRLTYTLD I V DG+ EKDG+DYAA TVQLAGGERVPFLFTIK L+A G F G+F VPSYRG++FLDPKGRGG++GYD A+ALPA GD+E+ AKEN K+T+ S G I V K ETGE+ GVFESIQP DTDLGAKVPKD+K G+WYAQ+ Sbjct: 157 KQQVTEFERTKLMTRLTYTLDAISADLNVGGDGSWTIQEKDGLDYAATTVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPAS--GDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_ANASP (Photosystem II manganese-stabilizing polypeptide OS=Anabaena sp. (strain PCC 7120) GN=psbO PE=3 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 1.158e-50 Identity = 101/190 (53.16%), Postives = 132/190 (69.47%), Query Frame = -3 Query: 177 NKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKP--------ENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 722 NK +F KL+TR T T+D++ G + + D ++ FVEKDG+D+ A+TVQL GGERVPFLFTIK LVA +P +F G F VPSYRG++FLDPKGRG +GYDNA+ALPA + D+EDL + N+K GKI+L + K +GE+ G FES QP DTDLGA PK+VKI+GI+YA++E Sbjct: 86 NKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGTFESEQPSDTDLGADEPKEVKIRGIFYARVE 273
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_THEEB (Photosystem II manganese-stabilizing polypeptide OS=Thermosynechococcus elongatus (strain BP-1) GN=psbO PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.415e-48 Identity = 100/190 (52.63%), Postives = 135/190 (71.05%), Query Frame = -3 Query: 177 NKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 722 NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DGID+ VTVQ+AGGER+P LFT+K LVAS +P +F GEF VPSYR ++FLDPKGRG ++GYD+AIALP + EE+LA+ N+K S + G+I+L+V K TGE+ G FES Q D D+GA P +VKIQG++YA +E Sbjct: 84 NKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_SYNEN (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus naegeli GN=psbO PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.415e-48 Identity = 100/190 (52.63%), Postives = 135/190 (71.05%), Query Frame = -3 Query: 177 NKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 722 NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DGID+ VTVQ+AGGER+P LFT+K LVAS +P +F GEF VPSYR ++FLDPKGRG ++GYD+AIALP + EE+LA+ N+K S + G+I+L+V K TGE+ G FES Q D D+GA P +VKIQG++YA +E Sbjct: 84 NKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_CYAA5 (Photosystem II manganese-stabilizing polypeptide OS=Cyanothece sp. (strain ATCC 51142) GN=psbO PE=3 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 5.949e-47 Identity = 101/190 (53.16%), Postives = 128/190 (67.37%), Query Frame = -3 Query: 180 VNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQL 725 VNK ++ KL+TR T +L++I G V DG + F E+ GID+ VTVQL GGE+VPF FTIK LV +P +F G+F VPSYRG++FLDPKGRG +TGYDNA+ALPA D+ED A N+K T G I+L VTK TGE+ GVF+S QP DTDLGAK P +VKI+GI+YA++ Sbjct: 86 VNKRQEAEYVPGKLLTRYTTSLEQISGKITVDEDGVVTFYEEGGIDFQPVTVQLPGGEQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDPKGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFDSEQPSDTDLGAKEPVEVKIRGIFYARV 271
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_SYNY3 (Photosystem II manganese-stabilizing polypeptide OS=Synechocystis sp. (strain PCC 6803) GN=psbO PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 90/191 (47.12%), Postives = 120/191 (62.83%), Query Frame = -3 Query: 177 VNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKP--------ENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 725 VNK ++ K++TR T +L++I G V DGT+ F EKDGID+ +TV L GGE VPF FT+K + +P +F G+F VPSYRG+ FLDPK RG TGYDNA+ALP+ D + N K T G ++L VT+ TGE+ G+FES QP DTDLGAK P DVK++GI+Y +++ Sbjct: 86 VNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVD 271
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_SYNE7 (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus (strain PCC 7942) GN=psbO PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.161e-42 Identity = 92/190 (48.42%), Postives = 123/190 (64.74%), Query Frame = -3 Query: 177 NKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVAS--------GKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 722 NK +F K++TR T +LD++ G + DGT+ F EK GID+ A+TV L GGE VPFLFT+K LVAS + G + VPSYR S+FLDPK RG +TGY++A+A+P+ GD EDL KEN+K G+I+L+V+K TGEV GVF +IQP DTD+G K DVK+ G +Y ++E Sbjct: 86 NKRQKAEFVPGKVLTRYTSSLDQVYGDLALKADGTVSFTEKGGIDFQAITVLLPGGEEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTTGYESAVAIPSA--GDAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGVFTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_POPEU (Oxygen-evolving enhancer protein 1, chloroplastic (Fragments) OS=Populus euphratica GN=PSBO PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.077e-28 Identity = 79/171 (46.20%), Postives = 84/171 (49.12%), Query Frame = -3 Query: 216 GVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPK 728 G+NKN+PPDFQ TKLMTR DGIDYAAVTVQL GGERVPFLFTIK GGSTGYDNA+ALPAGGR SKPETGE+IGVFES+QP DTDLGAK PK Sbjct: 13 GINKNSPPDFQKTKLMTR-------------------------DGIDYAAVTVQLPGGERVPFLFTIK-------------------------------GGSTGYDNAVALPAGGR---------------------------SKPETGEIIGVFESLQPSDTDLGAKTPK 100 The following BLAST results are available for this feature:
BLAST of CX043280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043280 ID=CX043280; Name=CX043280; organism=Citrus sinensis; type=EST; length=730bpback to top |