CX674294

Overview
NameCX674294
Unique NameCX674294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.577e-13
Identity = 46/106 (43.40%), Postives = 61/106 (57.55%), Query Frame = -2
Query:  182 RCTAKGDVYSFGVVLLELLTGKRPTDKDDFGDTNLVGWVKMKVREGKQ-MEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAMLREL 496
            R T K DVYS+GVVLLE+LTGK P D D  G  +LV WV+  + E K    ++DP L       D      + EM++ L + F CV +  ++RP M  VVAML E+
Sbjct:  943 RITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAHLVKWVRDHLAEKKDPSRLLDPRL-------DGRTDSIMHEMLQTLAVAFLCVSNKANERPLMKDVVAMLTEI 1041          
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.577e-13
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = -2
Query:  182 GQSFRCTAKGDVYSFGVVLLELLTGKRPTDKDDFGDTNLVGWVKMKVREGKQMEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAMLREL 508
            G S + T K DVYS+GVV+LE+LTGK+P D       ++V WVK K+R+   ++VID       +G       EV+EM++ L +   C++  P  RP M  V AML E+
Sbjct:  969 GYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVK-KIRD---IQVID-------QGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAMLSEI 1066          
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.577e-13
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = -2
Query:  182 GQSFRCTAKGDVYSFGVVLLELLTGKRPTDK-DDFGDTNLVGWVKMKVREGKQMEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAMLREL 508
            GQ+   T KGDVYSFGVVLLELLTG+RP D     G  +L+ WV     E ++ E+ DP +          + +  +EM+  LEI  +C+ + P  RP   Q+V+ L  +
Sbjct:  917 GQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIY---------DKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLENI 1017          
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.577e-13
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = -2
Query:  191 QSFRCTAKGDVYSFGVVLLELLTGKRPTDKDDF-GDTNLVGWVKMKVREGKQMEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAML 505
            QS R T K DVYSFGV++LE+L+GKRPTD        N+VGW+K  + E +  +++DP            E  +++ +   L I  QCV   P +RP M +VV +L
Sbjct:  478 QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDP----------NCEGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLL 573          
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.513e-13
Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = -2
Query:  176 TAKGDVYSFGVVLLELLTGKRPTDKDDFGDTNLVGWVKMKVREGKQMEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAMLRELMP 490
            T + DVYSFGVVLLEL++GK+P       + +LV WV+  VR+G+ +  IDP +       +    +E+ E V+   I + C  D P KRP M QVV +L+++ P
Sbjct:  695 TLESDVYSFGVVLLELVSGKKP-------EGDLVNWVRGLVRQGQGLRAIDPTM------QETVPEDEIAEAVK---IGYLCTADLPWKRPTMQQVVGLLKDISP 783          
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.992e-13
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = -2
Query:  182 GQSFRCTAKGDVYSFGVVLLELLTGKRPTDKDDFGDTNLVGWVKMKVREGKQMEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAMLREL 508
            G S + T K DVYS+GVV+LE+LTGK+P D       +LV WV+   +    +EV+D  L    +   EAEA+   EM++ L     CV+  P +RP M  V AML+E+
Sbjct:  968 GYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWVR---QNRGSLEVLDSTL----RSRTEAEAD---EMMQVLGTALLCVNSSPDERPTMKDVAAMLKEI 1066          
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.825e-13
Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = -2
Query:  164 RCTAKGDVYSFGVVLLELLTGKRPTDK--DDFGDTNLVGWVKMKVREGKQMEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAMLRELMPGSAT 496
            R + KGDVYSFGVVLLEL+TGK P++   ++ G  +L  WVK   R+  + EV D ELL  +  TDE E      M   +++  +C    P +RP M +VV  +  L P S +
Sbjct:  544 RVSQKGDVYSFGVVLLELITGKAPSNSVMNEEG-VDLPRWVKSVARDEWRREVFDSELL--SLATDEEEM-----MAEMVQLGLECTSQHPDQRPEMSEVVRKMENLRPYSGS 648          
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.022e-12
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = -2
Query:  185 SFRCTAKGDVYSFGVVLLELLTGKRPTDKDDFG-DTNLVGWVKMKVREGKQMEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAMLRE 502
            S + T K DVYSFGVVL ELL+GK+P   +DFG + N+V W +  +R+G    +IDP +         A   +++ + R  E+  QCV+     RP M +V+  +++
Sbjct:  781 SQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCI---------ASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQD 878          
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.022e-12
Identity = 45/112 (40.18%), Postives = 62/112 (55.36%), Query Frame = -2
Query:  167 RCTAKGDVYSFGVVLLELLTGKRPTDK--DDFGDTNLVGWVKMKVREGKQMEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAMLRELMPGSA 496
            R + K DVYSFGVVLLELLTGK P++   ++ G  +L  WV    RE  + EV D EL+ +     E      +EM   L++   C +  P KRP M++VV  ++EL    A
Sbjct:  538 RVSQKADVYSFGVVLLELLTGKAPSNSVMNEEG-MDLARWVHSVAREEWRNEVFDSELMSI-----ETVVSVEEEMAEMLQLGIDCTEQHPDKRPVMVEVVRRIQELRQSGA 643          
BLAST of CX674294 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.335e-12
Identity = 45/105 (42.86%), Postives = 56/105 (53.33%), Query Frame = -2
Query:  176 TAKGDVYSFGVVLLELLTGKRPTDKDDFGDTNLVGWVKMKVREGKQMEVIDPELLLVTKGTDEAEAEEVKEMVRYLEITFQCVDDFPSKRPNMLQVVAMLRELMP 490
            T   DVYSFG+++ E+LTGK           NLV WV   VRE    EV D ELL  T      + EE  EMV  L++   C    P KRPNM++VV M+ E+ P
Sbjct:  482 TQPSDVYSFGILIFEVLTGKSEV-------ANLVRWVNSVVREEWTGEVFDEELLRCT------QVEE--EMVEMLQVGMVCTARLPEKRPNMIEVVRMVEEIRP 571          
The following BLAST results are available for this feature:
BLAST of CX674294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
Y4265_ARATH1.577e-1343.40Probable LRR receptor-like serine/threonine-protei... [more]
RCH1_ARATH1.577e-1340.37LRR receptor-like serine/threonine-protein kinase ... [more]
PSKR1_DAUCA1.577e-1339.09Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
FEI1_ARATH1.577e-1339.62LRR receptor-like serine/threonine-protein kinase ... [more]
Y5815_ARATH3.513e-1340.00Probably inactive leucine-rich repeat receptor-lik... [more]
RCH2_ARATH5.992e-1341.28Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y1848_ARATH7.825e-1340.71Probable inactive receptor kinase At1g48480 OS=Ara... [more]
Y1677_ARATH1.022e-1236.45Probable LRR receptor-like serine/threonine-protei... [more]
RLK90_ARATH1.022e-1240.18Probable inactive receptor kinase RLK902 OS=Arabid... [more]
Y5332_ARATH1.335e-1242.86Probable inactive receptor kinase At5g53320 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_5E12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5E12-I23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674294 ID=CX674294; Name=CX674294; organism=Citrus sinensis; type=EST; length=509bp
TTTTTTTTTTTTTTTTTAAAAACAAAAAACTTGCCAAGTAGATACAATAA
ACTCTTGTACAAGTAAGTGAACAACAAATCTTAACGACCCTTATAATAAT
CTCACTTACACTAATAAGTAAACAATAATATTGTTTAAAATTTCAACCAC
TATTACTGCTTCCAGTGGCTGATCCAGGCATCAACTCCCTTAACATGGCC
ACAACCTGCAGCATATTTGGCCTTTTGGAAGGAAAATCATCAACACACTG
GAATGTTATCTCCAAGTACCTGACCATTTCTTTAACTTCTTCAGCTTCAG
CTTCATCAGTTCCTTTAGTGACCAAAAGCAATTCAGGGTCTATGACTTCC
ATTTGTTTCCCTTCTCTTACCTTCATTTTCACCCACCCCACCAAGTTAGT
GTCCCCAAAATCATCCTTATCCGTGGGGCGTTTTCCAGTCAGCAGTTCCA
GTAGGACAACCCCAAAGGAGTAGACGTCGCCTTTTGCAGTGCACCGGAAG
CTTTGGCCT
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