EY665487

Overview
NameEY665487
Unique NameEY665487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PYRC_BACSK (Dihydroorotase OS=Bacillus clausii (strain KSM-K16) GN=pyrC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.658e-11
Identity = 49/173 (28.32%), Postives = 86/173 (49.71%), Query Frame = 2 
Query:    8 PHYPLFSAEEIPDGDTRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKE 523
            PH+ L   ++I   D  F   PP+R   +++ L   L+DG ID +++DH+P   E K     +  +A  GI  L+   P+ +++  K G  TL+QL  W + +PA+    +  G + +G  ADL + + +A   +D    + +     + + G   +G   AT+  G  VYK+
Sbjct:  255 PHHLLLCEDDIIGKDPNFKMNPPLRAKEDRDALVAGLLDGTIDFIATDHAPHTAEEK---SASLERAPFGIVGLETAFPLLYTHFVKPGTFTLKQLIDWLTVKPAQ-TFNLPYGTLQVGAAADLTLIDLKANETIDPS--MFLSKGKNTPFAGWDCAGIPQATMVAGKTVYKK 421
The following BLAST results are available for this feature:
BLAST of EY665487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
PYRC_BACSK8.658e-1128.32Dihydroorotase OS=Bacillus clausii (strain KSM-K16... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665487 ID=EY665487; Name=EY665487; organism=Citrus sinensis; type=EST; length=833bp
GACATGCCCGCACTACCCCCTTTTCTCAGCAGAGGAGATTCCTGATGGAG
ATACTCGGTTCTTTTGTGCTCCGCCCATACGTGATGCAGCAAATAAAGAA
AAATTATGGGAGGCTCTGATGGATGGACACATTGATATGCTAAGCTCTGA
TCATTCACCAACCGTGCCAGAACTTAAACTCCTTGATGAAGGCAACTTTT
TGAAAGCTTGGGGTGGCATATCATCTTTGCAGTTTGTTCTTCCTGTCACG
TGGTCTTATGGGCGGAAATATGGAGTAACTTTAGAACAGTTAGCTTCATG
GTGGAGTGAGAGACCTGCCAAGCTTGCTGGACAAGTTTCAAAGGGTGCCA
TTGCAATTGGAAATCATGCAGACCTAGTTGTATGGGAACCTGAAGCGGAG
TTTGAACTTGACAATGACCATCCTGTACACATGAAGCATCCTAACATCTC
CGCCTATTTGGGAAGAAGACTCTCTGGGAAAGTACTGGCCACAATTTCAA
GGGGAAACCTCGTATACAAAGAGGGAAATCATGCTCCTGCAACTTGTGGT
TCTCCAATCCTGGCAACATGAACATACAAATTAAAATTAATATATTCTCA
TAAGTAAAGGAATAATCTCCCTTGCTTCATCAAAACACCCATCTCTGGGA
AAGAAGGAGAATTTCCACGCCCCCAGAACTTGAAGGGGTTGAATGGCGTT
ATAATTTTTTTAACGTGGAAACCGAAAATAATGTAAAACTTTGAAATTCA
AAAAAAAGGGGGCCTTTTATTTCTTTGGGTTTATCCTCCCCCAAAATTCA
ACAACACGACACACTAATAAACAAAAATAAAAA
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