EY665487

Overview
NameEY665487
Unique NameEY665487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PYRC_BACCL (Dihydroorotase OS=Bacillus caldolyticus GN=pyrC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13
Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 2
Query:    8 PHYPLFSAEEIPDGDTRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP--TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            PH+ L   E+IP  D  +   PP+R   +++ L E L+DG ID +++DH+P     + K ++   F     GI  L+   P+ +++  K GV TL+QL  W + +PA+  G +  G +A+G  AD+ V + E E  +D +          + + G    G  + T   G LV+++G
Sbjct:  258 PHHLLLCDEDIPGLDANYKMNPPLRSREDRDALIEGLLDGTIDFIATDHAPHTAAEKAKGIEAAPF-----GIVGLETAFPLLYTHFVKTGVFTLKQLVDWLTIKPAQCFG-LKAGRLAVGAPADIAVIDLETEEAIDPE--TFASKGKNTPFAGWVCQGWPVMTFVGGTLVWEKG 425          
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PHYDA_SHIBS (D-phenylhydantoinase OS=Shigella boydii serotype 4 (strain Sb227) GN=hyuA PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 49/179 (27.37%), Postives = 94/179 (52.51%), Query Frame = 2
Query:    2 TCPHYPLFSAEEIPDGD-TRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG-QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            TCP Y L         D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G +T E+     S  PA+L G    KG +A G+  D+V+ +P    ++ + H +H  + + S + G    G ++ T+SRG  ++ +G
Sbjct:  263 TCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRH-LH-DNADYSPWEGFTCQGAIVRTLSRGETIFCDG 439          
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PHYDA_ECOLU (D-phenylhydantoinase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=hyuA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 49/179 (27.37%), Postives = 94/179 (52.51%), Query Frame = 2
Query:    2 TCPHYPLFSAEEIPDGD-TRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG-QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            TCP Y L         D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G +T E+     S  PA+L G    KG +A G+  D+V+ +P    ++ + H +H  + + S + G    G ++ T+SRG  ++ +G
Sbjct:  263 TCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRH-LH-DNADYSPWEGFTCQGAIVRTLSRGETIFCDG 439          
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PHYDA_ECOLI (D-phenylhydantoinase OS=Escherichia coli (strain K12) GN=hyuA PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 49/179 (27.37%), Postives = 94/179 (52.51%), Query Frame = 2
Query:    2 TCPHYPLFSAEEIPDGD-TRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG-QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            TCP Y L         D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G +T E+     S  PA+L G    KG +A G+  D+V+ +P    ++ + H +H  + + S + G    G ++ T+SRG  ++ +G
Sbjct:  263 TCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRH-LH-DNADYSPWEGFTCQGAIVRTLSRGETIFCDG 439          
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PHYDA_ECOLC (D-phenylhydantoinase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=hyuA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 49/179 (27.37%), Postives = 94/179 (52.51%), Query Frame = 2
Query:    2 TCPHYPLFSAEEIPDGD-TRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG-QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            TCP Y L         D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G +T E+     S  PA+L G    KG +A G+  D+V+ +P    ++ + H +H  + + S + G    G ++ T+SRG  ++ +G
Sbjct:  263 TCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRH-LH-DNADYSPWEGFTCQGAIVRTLSRGETIFCDG 439          
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PHYDA_ECOHS (D-phenylhydantoinase OS=Escherichia coli O9:H4 (strain HS) GN=hyuA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 49/179 (27.37%), Postives = 94/179 (52.51%), Query Frame = 2
Query:    2 TCPHYPLFSAEEIPDGD-TRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG-QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            TCP Y L         D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G +T E+     S  PA+L G    KG +A G+  D+V+ +P    ++ + H +H  + + S + G    G ++ T+SRG  ++ +G
Sbjct:  263 TCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRH-LH-DNADYSPWEGFTCQGAIVRTLSRGETIFCDG 439          
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PHYDA_ECODH (D-phenylhydantoinase OS=Escherichia coli (strain K12 / DH10B) GN=hyuA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 49/179 (27.37%), Postives = 94/179 (52.51%), Query Frame = 2
Query:    2 TCPHYPLFSAEEIPDGD-TRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG-QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            TCP Y L         D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G +T E+     S  PA+L G    KG +A G+  D+V+ +P    ++ + H +H  + + S + G    G ++ T+SRG  ++ +G
Sbjct:  263 TCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRH-LH-DNADYSPWEGFTCQGAIVRTLSRGETIFCDG 439          
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PHYDA_ECOBW (D-phenylhydantoinase OS=Escherichia coli (strain K12 / BW2952) GN=hyuA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 49/179 (27.37%), Postives = 94/179 (52.51%), Query Frame = 2
Query:    2 TCPHYPLFSAEEIPDGD-TRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG-QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            TCP Y L         D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G +T E+     S  PA+L G    KG +A G+  D+V+ +P    ++ + H +H  + + S + G    G ++ T+SRG  ++ +G
Sbjct:  263 TCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRH-LH-DNADYSPWEGFTCQGAIVRTLSRGETIFCDG 439          
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PHYDA_ECO8A (D-phenylhydantoinase OS=Escherichia coli O8 (strain IAI1) GN=hyuA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 49/179 (27.37%), Postives = 94/179 (52.51%), Query Frame = 2
Query:    2 TCPHYPLFSAEEIPDGD-TRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG-QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            TCP Y L         D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G +T E+     S  PA+L G    KG +A G+  D+V+ +P    ++ + H +H  + + S + G    G ++ T+SRG  ++ +G
Sbjct:  263 TCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRH-LH-DNADYSPWEGFTCQGAIVRTLSRGETIFCDG 439          
BLAST of EY665487 vs. ExPASy Swiss-Prot
Match: PHYDA_ECO57 (D-phenylhydantoinase OS=Escherichia coli O157:H7 GN=hyuA PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 49/179 (27.37%), Postives = 94/179 (52.51%), Query Frame = 2
Query:    2 TCPHYPLFSAEEIPDGD-TRFFCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG-QVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPNISAYLGRRLSGKVLATISRGNLVYKEG 526
            TCP Y L         D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G +T E+     S  PA+L G    KG +A G+  D+V+ +P    ++ + H +H  + + S + G    G ++ T+SRG  ++ +G
Sbjct:  263 TCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRH-LH-DNADYSPWEGFTCQGAIVRTLSRGETIFCDG 439          
The following BLAST results are available for this feature:
BLAST of EY665487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
PYRC_BACCL1.427e-1330.11Dihydroorotase OS=Bacillus caldolyticus GN=pyrC PE... [more]
PHYDA_SHIBS1.864e-1327.37D-phenylhydantoinase OS=Shigella boydii serotype 4... [more]
PHYDA_ECOLU1.864e-1327.37D-phenylhydantoinase OS=Escherichia coli O17:K52:H... [more]
PHYDA_ECOLI1.864e-1327.37D-phenylhydantoinase OS=Escherichia coli (strain K... [more]
PHYDA_ECOLC1.864e-1327.37D-phenylhydantoinase OS=Escherichia coli (strain A... [more]
PHYDA_ECOHS1.864e-1327.37D-phenylhydantoinase OS=Escherichia coli O9:H4 (st... [more]
PHYDA_ECODH1.864e-1327.37D-phenylhydantoinase OS=Escherichia coli (strain K... [more]
PHYDA_ECOBW1.864e-1327.37D-phenylhydantoinase OS=Escherichia coli (strain K... [more]
PHYDA_ECO8A1.864e-1327.37D-phenylhydantoinase OS=Escherichia coli O8 (strai... [more]
PHYDA_ECO571.864e-1327.37D-phenylhydantoinase OS=Escherichia coli O157:H7 G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665487 ID=EY665487; Name=EY665487; organism=Citrus sinensis; type=EST; length=833bp
GACATGCCCGCACTACCCCCTTTTCTCAGCAGAGGAGATTCCTGATGGAG
ATACTCGGTTCTTTTGTGCTCCGCCCATACGTGATGCAGCAAATAAAGAA
AAATTATGGGAGGCTCTGATGGATGGACACATTGATATGCTAAGCTCTGA
TCATTCACCAACCGTGCCAGAACTTAAACTCCTTGATGAAGGCAACTTTT
TGAAAGCTTGGGGTGGCATATCATCTTTGCAGTTTGTTCTTCCTGTCACG
TGGTCTTATGGGCGGAAATATGGAGTAACTTTAGAACAGTTAGCTTCATG
GTGGAGTGAGAGACCTGCCAAGCTTGCTGGACAAGTTTCAAAGGGTGCCA
TTGCAATTGGAAATCATGCAGACCTAGTTGTATGGGAACCTGAAGCGGAG
TTTGAACTTGACAATGACCATCCTGTACACATGAAGCATCCTAACATCTC
CGCCTATTTGGGAAGAAGACTCTCTGGGAAAGTACTGGCCACAATTTCAA
GGGGAAACCTCGTATACAAAGAGGGAAATCATGCTCCTGCAACTTGTGGT
TCTCCAATCCTGGCAACATGAACATACAAATTAAAATTAATATATTCTCA
TAAGTAAAGGAATAATCTCCCTTGCTTCATCAAAACACCCATCTCTGGGA
AAGAAGGAGAATTTCCACGCCCCCAGAACTTGAAGGGGTTGAATGGCGTT
ATAATTTTTTTAACGTGGAAACCGAAAATAATGTAAAACTTTGAAATTCA
AAAAAAAGGGGGCCTTTTATTTCTTTGGGTTTATCCTCCCCCAAAATTCA
ACAACACGACACACTAATAAACAAAAATAAAAA
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