EY717722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 3.484e-51 Identity = 102/150 (68.00%), Postives = 116/150 (77.33%), Query Frame = 2 Query: 143 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSAS---FKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 GA S P++ F G LKK + S++ FK+ A E+DE KQT QDRWKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLRTY+ DNT+ G YIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIW K Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGK 158 HSP 2 Score: 30.4166 bits (67), Expect = 3.484e-51 Identity = 22/61 (36.07%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIEFTGRKK 735 LG G KGQG F + G+NPIMM+A + P + + RYREA + + K Sbjct: 152 LGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGK 212
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.312e-50 Identity = 97/149 (65.10%), Postives = 113/149 (75.84%), Query Frame = 2 Query: 143 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 GA S P+ F G +K +K+ S ++ A E+D+ KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAPMG GTH A++SSY+YISQGLR Y+ DNT+DGLYIAPAFMDKL+VH+ KNFM+LPNIKVPLILGIW K Sbjct: 10 GAPASTPTI-FLGKKVKNYYHG--GNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGK 155 HSP 2 Score: 33.4982 bits (75), Expect = 1.312e-50 Identity = 22/60 (36.67%), Postives = 30/60 (50.00%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENPYIHQARYREAIEFTGRKK 735 LG G KGQG F + G+NPIMM+A + E + + RYREA + + K Sbjct: 149 LGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNGEPAKLIRQRYREAADIINKGK 208
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 5.712e-48 Identity = 102/154 (66.23%), Postives = 116/154 (75.32%), Query Frame = 2 Query: 143 GAATSVPS-SSFFGTSLKK--VSSRIP---PSKVPSASFKITA--EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 GA S P+ SSF G L K VS+ + S ++ FK A EVDE KQT +DRWKGLAYD SDDQQDITRGKG VD+LFQAPMG GTH AV+SSYDYISQG ++YN DN +DG YIA FMDKLVVH++KNFM+LPNIKVPLILGIW K Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGK 163
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 3.713e-47 Identity = 91/158 (57.59%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 110 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSS-RIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 A PL+ NGS A SVP+S F G+SLKK ++ R P S S + +T + EN++ D+W LA D SDDQ DI RGKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++LPNIK+PLILG+W K Sbjct: 11 ATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSS---SRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGK 165 HSP 2 Score: 30.8018 bits (68), Expect = 3.713e-47 Identity = 22/61 (36.07%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIEFTGRKK 735 LG G KGQG F + G+NPIMM+A + P + + RYREA + + K Sbjct: 159 LGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGK 219
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.840e-47 Identity = 94/149 (63.09%), Postives = 111/149 (74.50%), Query Frame = 2 Query: 143 GAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITAEVDENKQTKQ--DRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 GA S P++ F G LKK V+S + S + + T EN K+ D+WKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLR Y+ DNT+ G YIAPAFMDKLVVH++KNFM+LPNIK+PLILGIW K Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 157 HSP 2 Score: 30.4166 bits (67), Expect = 4.840e-47 Identity = 22/61 (36.07%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIEFTGRKK 735 LG G KGQG F + G+NPIMM+A + P + + RYREA + + K Sbjct: 151 LGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGK 211
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.369e-25 Identity = 63/129 (48.84%), Postives = 81/129 (62.79%), Query Frame = 2 Query: 203 SRIPPSKVPSASFKITAEVDENKQTKQDRWKGL--AYDESDDQQDITRGKGAVDSLFQAPMGTG-THYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 +R+ V A ++ A + + RW+ + D SDDQQDITRG+ VD LFQ G G TH AV+SS +Y+SQ ++N N DG YI+PAF+DK+ +HI KNFM LP IKVPLILGIW K Sbjct: 18 ARVATRSVRRAQLQVVAP----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGK 140
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.420e-14 Identity = 41/48 (85.42%), Postives = 42/48 (87.50%), Query Frame = 2 Query: 296 GLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLR 439 GLAYD SDDQQDITRG VDSLFQAPM GTHYAVMSSY+YISQGLR Sbjct: 1 GLAYDISDDQQDITRGM--VDSLFQAPMNDGTHYAVMSSYEYISQGLR 46 The following BLAST results are available for this feature:
BLAST of EY717722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY717722 ID=EY717722; Name=EY717722; organism=Citrus sinensis; type=EST; length=886bpback to top |