CX043278

Overview
NameCX043278
Unique NameCX043278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACP2 (NADPH dehydrogenase OS=Bacillus pumilus (strain SAFR-032) GN=namA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.076e-24
Identity = 77/234 (32.91%), Postives = 119/234 (50.85%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNNVP--QP-HAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGL 696
            +R+V++P+    SY+     QP H   Y S+   + GL++ EA+ VS   +      GIW+ E +E +  + + + A G     Q+ H GR +  D      + I   ++  TP                ++  D+I   V  F+ AA  A +AGFD IE+HGAHGYLI++F+    N RTD YGGS ENR RF  E+V AV NE+    + +R+S  ++Y   G    + +G+
Sbjct:   18 NRIVMSPMCMYSSYDRDGKLQPFHFTHYISRAQGQAGLIMVEASAVSPEGRISDQDLGIWSDEHIEGFASLNEQIKAYGTKTAIQLAHAGRKAELDGDILAPSSIPFDEQSKTPV---------------QMSVDQIKDTVQAFQDAAVRAKKAGFDIIEIHGAHGYLINEFLSPLANHRTDDYGGSPENRYRFLREVVNAV-NEVWDGPLFVRVSA-SDYTTKGLDIADYIGI 234          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_GEOSW (NADPH dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=namA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23
Identity = 75/232 (32.33%), Postives = 114/232 (49.14%), Query Frame = 1
Query:    4 HRVVLAPLTR---QRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+           V   H I Y ++   + GL+I EAT V+   +      GIW+ E V+  + +   V   G     Q+ H GR S  D +    + I  ++K  TP               + +   +I + +  F+  AR A EAGFD IE+HGAHGYLI++F+    N R D+YGGS ENR RF  EI++AV  E+    + +R+S       + D +PE L
Sbjct:   18 NRIVMSPMCMYSCDTEDGKVRNWHKIHYPTRAVGQVGLIIVEATAVAAQGRISSRDLGIWSDEHVDGLRELASLVKEHGAKIGIQLAHAGRKSEVDGEIIAPSAIPFSEKTRTP---------------KEMTKADIEETIQAFQNGARRAKEAGFDIIEIHGAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEIIDAV-REVWDGPLFVRIS-------ASDYHPEGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: FADH_ECOLI (2,4-dienoyl-CoA reductase [NADPH] OS=Escherichia coli (strain K12) GN=fadH PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 71/211 (33.65%), Postives = 107/211 (50.71%), Query Frame = 1
Query:   76 YYSQRTTKGGLLIAEATGVSD-TAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMA 705
            +Y++R   G  LI       D T  G      +    Q+   + I +AVH +GG    QI H GR S   YQP+  AP S+   P+   +            P  L  +EI Q++++F   A+ A EAG+DG+E+ G+ GYLI++F+  + N R+DQ+GG   NR RFA+E+V AV   +G D + I      + +E G +  E + L  A
Sbjct:   43 FYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYS---YQPHLVAP-SALQAPINRFV------------PHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQA 237          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NADO_THEBR (NADH oxidase OS=Thermoanaerobacter brockii PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.276e-22
Identity = 84/250 (33.60%), Postives = 120/250 (48.00%), Query Frame = 1
Query:    4 HRVVLAPL-TRQRSYNNVPQPHAILYYSQRTTKG-GLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWK------PIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYG 726
            +R+V+ P+ T   + +       I YY  R   G GL+I E   V      YP    +  + +++  K       + +AVH+ G   F QI H GR +       G  P++ +  P +             T PR L  +EI +I+  F  AA  A  A FDGIELHGAHGYLI QFM  + N R D+YGGS E R RF LEI+  +   +G D  +  R S    ++E G++  E  G  +A+ L + G
Sbjct:   20 NRIVMPPMATNLANEDGSVSQRLIDYYVARARGGVGLIILENVQVD-----YPQGKNVACQLRLDDDKYMAGFFELAEAVHSYGAKIFMQIHHAGRQTTPGIT-EGLQPVAPSPVPCS----------FLGTQPRELTINEIEEIIQKFVDAAVRAKGAMFDGIELHGAHGYLIGQFMSPRTNRRVDKYGGSFERRMRFPLEIIRRIKEAVGEDYPISFRFSA-DEFVEGGNTLEE--GKQIAKMLEEAG 250          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACCR (NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=namA PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22
Identity = 73/232 (31.47%), Postives = 111/232 (47.84%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N    V   H I Y ++   + GL++ EAT V    +   +  GIW    +E        +H  G     Q+ H GR +  D      + I   DK   P                 +   +I + +  F+ AA  + +AGFD IELHGAHGYLI++F+    N RTD+YGGS ENR RF  EI+++V NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSSGNEDGRVTNFHLIHYGTRAAGQVGLVMVEATAVLAEGRISNNDLGIWDDNLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELDTNAFAPSAIPFNDKMKIPV---------------EMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEFLSPLTNKRTDKYGGSPENRYRFLREIIDSV-NEVWDGPIFVRIS-------ANDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: BAICD_EUBSP (Bile acid-inducible operon protein CD OS=Eubacterium sp. (strain VPI 12708) GN=baiCD PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22
Identity = 67/208 (32.21%), Postives = 98/208 (47.12%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGG--LLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD 621
            +R+VL  +  + + N       ++ Y     K G  L I E   +      Y    G++T   VE  K + DAVH  GG    Q+WH G                      +PQ+  +  +  +   P  L  + I +IV +F   AR A++AGFD +E H AH YL  +F+   +N RTD+YGGS ENRCRF  E+V+A+ + I  D
Sbjct:   19 NRIVLPGMNTKMAKNKHDIGEDMIAYHVARAKAGCALNIFECVALCPAPHAYMYM-GLYTDHHVEQLKKLTDAVHEAGGKMGIQLWHGG---------------------FSPQMFFDETNTLE--TPDTLTVERIHEIVEEFGRGARMAVQAGFDAVEFHAAHSYLPHEFLSPGMNKRTDEYGGSFENRCRFCYEVVQAIRSNIPDD 202          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACSU (NADPH dehydrogenase OS=Bacillus subtilis GN=namA PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22
Identity = 63/202 (31.19%), Postives = 102/202 (50.50%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAV 600
            +R+V++P+    S+     +   H   Y S+   + GL+I EA+ V+   +      GIW+ E +E +  + + V  +G     Q+ H GR +  +      + I+  ++  TP                 +  +++ + V +F+ AA  A EAGFD IE+H AHGYLI +F+    N RTD+YGGS ENR RF  EI++ V
Sbjct:   18 NRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPV---------------EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEV 204          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACC4 (NADPH dehydrogenase OS=Bacillus cereus (strain B4264) GN=namA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22
Identity = 73/232 (31.47%), Postives = 111/232 (47.84%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYN---NVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N   +V   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +  D      + I   DK   P                 +   +I + +  F+ AA  + +AGFD IELHGAHGYLI++F+    N RTD+YGGS ENR RF  EI+++V NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSSGNEDGSVTNFHLIHYGTRAAGQVGLVMVEATAVLAEGRISNKDLGIWDDNLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELDTNAFAPSAIPFNDKMKIPV---------------EMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEFLSPLTNKRTDKYGGSPENRYRFLREIIDSV-NEVWDGPIFVRIS-------ANDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACCN (NADPH dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=namA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21
Identity = 73/232 (31.47%), Postives = 110/232 (47.41%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N    V   H I Y ++   + GL++ EAT V+   +      GIW  E +E  +  V  +         Q+ H GR +     P   + I   DK   P   +                ++I   +  F+ AA  + +AGFD IELHGAHGYLI++F+    N RTD+YGG+ ENR RF  EI+ AV  E+    + +R+S       + D +PE L
Sbjct:   18 NRIVMSPMCMYSSENEDGKVTNFHLIHYGTRAMGQVGLVMLEATAVAAEGRISNKDLGIWNDEHIEGLQKTVSFIKEHDSKAAIQLAHAGRKAELHTDPVAPSAIPFNDKMKVPVAMSK---------------EQIQDTITAFQKAAIRSKQAGFDVIELHGAHGYLINEFLSPLSNKRTDEYGGTAENRYRFLREIIHAV-KEVWEGPLFVRIS-------ADDYHPEGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_LISMF (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=namA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.517e-21
Identity = 72/219 (32.88%), Postives = 104/219 (47.49%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS 642
            +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H  G     Q+ H GR   +  +   P+  A    +DKP+                   L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+    N R D YGG   NR +   +I++AV  E+    + +R+S
Sbjct:   17 NRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAV-KEVWDGPIIVRVS 216          
The following BLAST results are available for this feature:
BLAST of CX043278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NAMA_BACP27.076e-2432.91NADPH dehydrogenase OS=Bacillus pumilus (strain SA... [more]
NAMA_GEOSW5.990e-2332.33NADPH dehydrogenase OS=Geobacillus sp. (strain WCH... [more]
FADH_ECOLI1.022e-2233.652,4-dienoyl-CoA reductase [NADPH] OS=Escherichia c... [more]
NADO_THEBR2.276e-2233.60NADH oxidase OS=Thermoanaerobacter brockii PE=1 SV... [more]
NAMA_BACCR2.973e-2231.47NADPH dehydrogenase OS=Bacillus cereus (strain ATC... [more]
BAICD_EUBSP2.973e-2232.21Bile acid-inducible operon protein CD OS=Eubacteri... [more]
NAMA_BACSU3.883e-2231.19NADPH dehydrogenase OS=Bacillus subtilis GN=namA P... [more]
NAMA_BACC43.883e-2231.47NADPH dehydrogenase OS=Bacillus cereus (strain B42... [more]
NAMA_BACCN1.130e-2131.47NADPH dehydrogenase OS=Bacillus cereus subsp. cyto... [more]
NAMA_LISMF2.517e-2132.88NADPH dehydrogenase OS=Listeria monocytogenes sero... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A08-B16-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043278 ID=CX043278; Name=CX043278; organism=Citrus sinensis; type=EST; length=728bp
TCTCATAGAGTTGTTTTGGCACCACTGACTAGACAGAGATCATACAACAA
TGTTCCTCAGCCACATGCCATTTTGTATTACTCTCAAAGAACCACCAAAG
GGGGTTTGCTTATAGCCGAAGCCACTGGAGTTTCCGACACTGCTCAAGGG
TATCCAGATACACCTGGTATCTGGACAAAGGAGCAAGTTGAAGCATGGAA
ACCGATTGTAGATGCTGTTCATGCCAAAGGTGGGATCTTCTTTTGTCAGA
TTTGGCACGTTGGCAGGGTTTCAAATCAAGATTATCAGCCAAATGGTCAA
GCTCCAATTTCCAGTACAGACAAGCCATTGACCCCTCAAATCCGCGCTAA
TGGTGTTGATATTGCACAATTCACTCCTCCAAGGCGGCTAAGGACAGATG
AAATCCCTCAAATTGTGAATGATTTCAGGCTTGCTGCAAGAAACGCAATT
GAGGCTGGTTTTGATGGCATTGAGCTCCACGGTGCACATGGCTACCTAAT
TGACCAATTTATGAAGGATCAAGTGAATGATCGAACAGACCAGTATGGAG
GATCCTTAGAGAATCGTTGCCGTTTTGCTTTAGAAATAGTTGAAGCTGTT
TCCAATGAAATAGGGGCAGATAGGGTTGGGATAAGACTATCTCCGTTTGC
AAACTATATGGAATCAGGAGACTCTAACCCAGAAGCTTTAGGTCTTTACA
TGGCAGAATCCTTGAACAAATATGGTAT
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