CX043278

Overview
NameCX043278
Unique NameCX043278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACWK (NADPH dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=namA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.199e-20
Identity = 69/232 (29.74%), Postives = 108/232 (46.55%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R++++P+    S N    V   H + Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +  +      + I   D+   P                 +   +I + V+ F+ AA  +  AG D IELHGAHGYLI++F+    N R D+YGGS ENR RF  EI++AV NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIIMSPMCMYSSENEDGQVTNFHLVHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDNLIEGLHKTTTFIHNNGAKAAIQLAHAGRKAELETDAFAPSAIPFNDRMKIPV---------------EMNKQQIKETVSAFQKAALRSKRAGVDVIELHGAHGYLINEFLSPLSNKRIDEYGGSPENRYRFLREIIDAV-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACC1 (NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=namA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.199e-20
Identity = 72/234 (30.77%), Postives = 109/234 (46.58%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN--QDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N    V   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +    D       P + T K                  P  +   +I   V  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSSENGDGQVTNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPSAIPFNETMKM-----------------PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACLD (NADPH dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=namA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 64/216 (29.63%), Postives = 102/216 (47.22%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS 642
            +R+V++P+    S+     V   H   Y S+   + GL++ EAT V+   +      GIW    ++    +   +   G     Q+ H GR +  +    G + I   +   TP                 +  ++I + V  F+  A  A  AGFD IE+HGAHGYLI++F+    N R D+YGGS ENR R   E+++AV  E+ A  + +R+S
Sbjct:   19 NRIVMSPMCMYSSHEKDGKVQPFHMTHYISRAVGQVGLIMVEATAVTPQGRISDQDLGIWDDAHIDGLAALTSQIKTYGSKTAIQLAHAGRKAEVEGTIYGPSAIPFDENSRTPV---------------EMTKEDIKETVQAFKKGAERAKAAGFDIIEIHGAHGYLINEFLSPLSNKREDEYGGSPENRYRLLREVIDAV-KEVWAGPLFVRVS 218          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACCZ (NADPH dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=namA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 68/232 (29.31%), Postives = 109/232 (46.98%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N    V   H + Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +  +      + I   +   TP                 +   +I   +  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSSENEDGQVTNFHLVHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPSAIPFNETMKTPV---------------EMSKHQIKDTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACC0 (NADPH dehydrogenase OS=Bacillus cereus (strain AH820) GN=namA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.057e-19
Identity = 68/232 (29.31%), Postives = 109/232 (46.98%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N    V   H + Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +  +      + +   +   TP                 +   +I   V  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSSENEDGQVTNFHLVHYGTRAAGQVGLVMIEATAVLPGGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPSAVPFNETMKTPV---------------EMSKHQIKDTVLAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACAN (NADPH dehydrogenase OS=Bacillus anthracis GN=namA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 71/234 (30.34%), Postives = 109/234 (46.58%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN--QDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N    V   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +    D       P + T K                  P  +   +I   +  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSSENEDGQVTNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPSAVPFNETMKI-----------------PVEMSIHQIKNTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACAC (NADPH dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=namA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 71/234 (30.34%), Postives = 109/234 (46.58%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN--QDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N    V   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +    D       P + T K                  P  +   +I   +  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSSENEDGQVTNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPSAVPFNETMKI-----------------PVEMSIHQIKNTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACAA (NADPH dehydrogenase OS=Bacillus anthracis (strain A0248) GN=namA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 71/234 (30.34%), Postives = 109/234 (46.58%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN--QDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N    V   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +    D       P + T K                  P  +   +I   +  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSSENEDGQVTNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELETDALAPSAVPFNETMKI-----------------PVEMSIHQIKNTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_GEOTN (NADPH dehydrogenase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=namA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19
Identity = 69/232 (29.74%), Postives = 108/232 (46.55%), Query Frame = 1
Query:    4 HRVVLAPLTR---QRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+           V   H I Y ++   + GL+I EATGV+   +      GIW  + +     +V  V   G     Q+ H GR S    +    + I   +   TP               + +   +I + V  F+  AR A +AGFD IE+H AHGYLI++F+    N R D+YGGS ENR  F  E+++AV  E+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSCDTKDGTVRTWHKIHYPARAIGQVGLIIVEATGVTPQGRISEHDLGIWDDDHIHGLHELVGLVKEHGAAIGIQLAHAGRKSEVPGEIIAPSAIPFNESSPTP---------------KEMTKADIEKTVQAFQDGARRAKKAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYHFLGEVIDAV-REVWDGPLFVRIS-------ASDYHPDGL 226          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACHK (NADPH dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=namA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.248e-19
Identity = 69/232 (29.74%), Postives = 112/232 (48.28%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690
            +R+V++P+    S N    V   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +  + + +  AP +    P    ++           P  +   +I   +  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS E R RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:   18 NRIVMSPMCMYSSENEDGQVTNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKTTTFIHDNGAKAAIQLAHAGRKA--ELETDALAPSAI---PFNETMKI----------PVEMSIQQIKNTILAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPEKRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
The following BLAST results are available for this feature:
BLAST of CX043278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NAMA_BACWK6.199e-2029.74NADPH dehydrogenase OS=Bacillus weihenstephanensis... [more]
NAMA_BACC16.199e-2030.77NADPH dehydrogenase OS=Bacillus cereus (strain ATC... [more]
NAMA_BACLD8.096e-2029.63NADPH dehydrogenase OS=Bacillus licheniformis (str... [more]
NAMA_BACCZ8.096e-2029.31NADPH dehydrogenase OS=Bacillus cereus (strain ZK ... [more]
NAMA_BACC01.057e-1929.31NADPH dehydrogenase OS=Bacillus cereus (strain AH8... [more]
NAMA_BACAN1.381e-1930.34NADPH dehydrogenase OS=Bacillus anthracis GN=namA ... [more]
NAMA_BACAC1.381e-1930.34NADPH dehydrogenase OS=Bacillus anthracis (strain ... [more]
NAMA_BACAA1.381e-1930.34NADPH dehydrogenase OS=Bacillus anthracis (strain ... [more]
NAMA_GEOTN4.018e-1929.74NADPH dehydrogenase OS=Geobacillus thermodenitrifi... [more]
NAMA_BACHK5.248e-1929.74NADPH dehydrogenase OS=Bacillus thuringiensis subs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A08-B16-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043278 ID=CX043278; Name=CX043278; organism=Citrus sinensis; type=EST; length=728bp
TCTCATAGAGTTGTTTTGGCACCACTGACTAGACAGAGATCATACAACAA
TGTTCCTCAGCCACATGCCATTTTGTATTACTCTCAAAGAACCACCAAAG
GGGGTTTGCTTATAGCCGAAGCCACTGGAGTTTCCGACACTGCTCAAGGG
TATCCAGATACACCTGGTATCTGGACAAAGGAGCAAGTTGAAGCATGGAA
ACCGATTGTAGATGCTGTTCATGCCAAAGGTGGGATCTTCTTTTGTCAGA
TTTGGCACGTTGGCAGGGTTTCAAATCAAGATTATCAGCCAAATGGTCAA
GCTCCAATTTCCAGTACAGACAAGCCATTGACCCCTCAAATCCGCGCTAA
TGGTGTTGATATTGCACAATTCACTCCTCCAAGGCGGCTAAGGACAGATG
AAATCCCTCAAATTGTGAATGATTTCAGGCTTGCTGCAAGAAACGCAATT
GAGGCTGGTTTTGATGGCATTGAGCTCCACGGTGCACATGGCTACCTAAT
TGACCAATTTATGAAGGATCAAGTGAATGATCGAACAGACCAGTATGGAG
GATCCTTAGAGAATCGTTGCCGTTTTGCTTTAGAAATAGTTGAAGCTGTT
TCCAATGAAATAGGGGCAGATAGGGTTGGGATAAGACTATCTCCGTTTGC
AAACTATATGGAATCAGGAGACTCTAACCCAGAAGCTTTAGGTCTTTACA
TGGCAGAATCCTTGAACAAATATGGTAT
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