CX043277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PSESH (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. phaseolicola GN=trpB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.160e-34 Identity = 73/152 (48.03%), Postives = 96/152 (63.16%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG FGG++V ETL+ + L E+ D +F +E++ RDYVGR PLYFAERLT+ +G +IY KRE+LNH GAHKINN IGQ ++AKRMG+K ++A TGAG HGV ++MG D+E+Q + V MKLL Sbjct: 14 GLFGSFGGRYVAETLMPLVLDLNREYEAAKADPEFAKEMAYFQRDYVGRPNPLYFAERLTEFC-----DGAKIYFKREELNHTGAHKINNCIGQVLLAKRMGKKRLIAETGAGMHGVATATVAARFGLPCVIYMGATDIERQQANVFRMKLL 160
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PSE14 (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.160e-34 Identity = 73/152 (48.03%), Postives = 96/152 (63.16%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG FGG++V ETL+ + L E+ D +F +E++ RDYVGR PLYFAERLT+ +G +IY KRE+LNH GAHKINN IGQ ++AKRMG+K ++A TGAG HGV ++MG D+E+Q + V MKLL Sbjct: 14 GLFGSFGGRYVAETLMPLVLDLNREYEAAKADPEFAKEMAYFQRDYVGRPNPLYFAERLTEFC-----DGAKIYFKREELNHTGAHKINNCIGQVLLAKRMGKKRLIAETGAGMHGVATATVAARFGLPCVIYMGATDIERQQANVFRMKLL 160
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_THET8 (Tryptophan synthase beta chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34 Identity = 72/152 (47.37%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG +GG++VPETLI L LEA + +D F EEL LR + GR TPLY A+RL++++ G +++LKREDL H GAHKINN +GQA++A+RMG++ ++A TGAGQHGV V+MG D+ +Q+ V MKLL Sbjct: 28 GRFGPYGGRYVPETLIPALEELEAAYREAKKDPAFLEELDHYLRQFAGRPTPLYHAKRLSEYWG-----GAQVFLKREDLLHTGAHKINNTLGQALLARRMGKRRVIAETGAGQHGVSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLL 174
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_THET2 (Tryptophan synthase beta chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpB PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34 Identity = 72/152 (47.37%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG +GG++VPETLI L LEA + +D F EEL LR + GR TPLY A+RL++++ G +++LKREDL H GAHKINN +GQA++A+RMG++ ++A TGAGQHGV V+MG D+ +Q+ V MKLL Sbjct: 14 GRFGPYGGRYVPETLIPALEELEAAYREAKKDPAFLEELDHYLRQFAGRPTPLYHAKRLSEYWG-----GAQVFLKREDLLHTGAHKINNTLGQALLARRMGKRRVIAETGAGQHGVSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLL 160
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_LEGPL (Tryptophan synthase beta chain OS=Legionella pneumophila (strain Lens) GN=trpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34 Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG +GG FV +TL+ L LE + D F EL T L+DYVGR PLY A L+ +K G +IYLKREDLNH GAHKINN IGQA++AKRMG+ ++A TGAGQHGV V+MG+ D+++QSS V MKLL Sbjct: 11 GHFGPYGGMFVADTLVHALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLYHAVHLS-----KKIGGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQHGVATATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLL 157
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_LEGPH (Tryptophan synthase beta chain OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=trpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34 Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG +GG FV +TL+ L LE + D F EL T L+DYVGR PLY A L+ +K G +IYLKREDLNH GAHKINN IGQA++AKRMG+ ++A TGAGQHGV V+MG+ D+++QSS V MKLL Sbjct: 11 GHFGPYGGMFVADTLVHALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLYHAVHLS-----KKIGGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQHGVATATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLL 157
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_LEGPA (Tryptophan synthase beta chain OS=Legionella pneumophila (strain Paris) GN=trpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34 Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG +GG FV +TL+ L LE + D F EL T L+DYVGR PLY A L+ +K G +IYLKREDLNH GAHKINN IGQA++AKRMG+ ++A TGAGQHGV V+MG+ D+++QSS V MKLL Sbjct: 11 GHFGPYGGMFVADTLVHALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLYHAVHLS-----KKIGGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQHGVATATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLL 157
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_FUSNN (Tryptophan synthase beta chain OS=Fusobacterium nucleatum subsp. nucleatum GN=trpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34 Identity = 73/152 (48.03%), Postives = 96/152 (63.16%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG FGG +VPE + L LE +N D +F +E L++Y GRETPLYFAE LT++ G +IYLKREDLNH+GAHK+NN IGQ ++AKRMG+K ++A TGAGQHGV ++MG D+E+Q V M++L Sbjct: 8 GYFGEFGGSYVPEVVQKALDKLEEAYNKYKDDEEFLKEYHHYLKNYSGRETPLYFAESLTNYLG-----GAKIYLKREDLNHLGAHKLNNVIGQILLAKRMGKKKVIAETGAGQHGVATAAAAAKFGMQCDIYMGALDVERQRLNVFRMEIL 154
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_EXIS2 (Tryptophan synthase beta chain OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=trpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34 Identity = 73/152 (48.03%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G++G +GG+++PETL+ + LE + V +D F+E ++ L +YVGR+TPLY+AE LT G +IYLKREDLNH GAHKINN IGQA++A+RMG++ IVA TGAGQHGV +FMG D+ +Q V M+LL Sbjct: 11 GQYGIYGGRYIPETLMQAVLELEQAYAEVKEDPAFRERMNDLLENYVGRQTPLYYAEHLTRTIG-----GAKIYLKREDLNHTGAHKINNTIGQALLAERMGKRKIVAETGAGQHGVATATVCALLDLECVIFMGEEDIRRQELNVFRMELL 157
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_DINSH (Tryptophan synthase beta chain OS=Dinoroseobacter shibae (strain DFL 12) GN=trpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34 Identity = 79/177 (44.63%), Postives = 105/177 (59.32%), Query Frame = 1 Query: 265 MRKPLINSLLPKTDHDHREYWKLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 M LINS + D + G+FG FGG+FV ETL+ + LE ++ F D F +E+ YVGR +PLYFAERLT E+ G ++YLKR++LNH GAHKINN +GQ ++A+RMG+ I+A TGAGQHGV V+MG D+E+Q+ V MKLL Sbjct: 1 MPDDLINSFMTGPDEN---------GRFGDFGGRFVSETLMPLILELERQYEFAKTDQAFWDEMHHLWTHYVGRPSPLYFAERLT-----ERLGGAKVYLKRDELNHTGAHKINNVLGQIILARRMGKTRIIAETGAGQHGVATATVCAKFGLKCVVYMGAHDVERQAPNVFRMKLL 163 The following BLAST results are available for this feature:
BLAST of CX043277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043277 ID=CX043277; Name=CX043277; organism=Citrus sinensis; type=EST; length=796bpback to top |