CX043277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PROMS (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain AS9601) GN=trpB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.958e-39 Identity = 81/152 (53.29%), Postives = 107/152 (70.39%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG++GG++VPETL+ L LE + +D F EEL+ L+ YVGRETPLY A+RLT+HY+N++ P I+LKREDLNH GAHKINNA+GQA++A RMG+K I+A TGAGQHGV ++MG D+++QS V MKLL Sbjct: 24 GRFGKYGGQYVPETLMPALFELEDAASNAWKDKLFVEELNHLLKTYVGRETPLYEAKRLTEHYKNKQAT-PRIWLKREDLNHTGAHKINNALGQALLAIRMGKKRIIAETGAGQHGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLL 174
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_CLOAB (Tryptophan synthase beta chain OS=Clostridium acetobutylicum GN=trpB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.958e-39 Identity = 79/152 (51.97%), Postives = 102/152 (67.11%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG+FGG++VPETL+ ++ LE EFN + D KF E L YVGRETPLYFAE +T + G +IYLKREDLNH G+HK+NNA+GQ ++AKRMG+K ++A TGAGQHGV VFMG D+E+Q+ V MK+L Sbjct: 3 GRFGKFGGQYVPETLMNAINELEVEFNKAINDEKFMMEYKYYLEKYVGRETPLYFAENMTKNLG-----GAKIYLKREDLNHTGSHKLNNALGQVLLAKRMGKKRVIAETGAGQHGVATATAAALFGLECEVFMGAEDVERQALNVFRMKIL 149
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PROMM (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9313) GN=trpB PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.087e-39 Identity = 83/152 (54.61%), Postives = 100/152 (65.79%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FGR+GG++VPETL+ L+ LE +D F EL LR YVGR TPLY AERLT HY G GP I+LKREDLNH GAHKINNA+GQA++A RMG+K I+A TGAGQHGV V+MG DM +Q+ V M+LL Sbjct: 44 GRFGRYGGQYVPETLMPALAELEQAAALAWKDPAFTAELDRLLRSYVGRATPLYEAERLTAHYCRSDG-GPRIWLKREDLNHTGAHKINNALGQALLALRMGKKRIIAETGAGQHGVATATVCARFGLECVVYMGAEDMRRQALNVFRMRLL 194
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SYNS9 (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9902) GN=trpB PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.550e-38 Identity = 82/152 (53.95%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FGRFGG++VPETL+ L+ LE D F L+ L+ YVGR TPLY AERLT HYR + G GP I+LKREDLNH GAHKINNA+GQA++A RMG+K I+A TGAGQHGV ++MG DM +Q+ V M+LL Sbjct: 26 GRFGRFGGQYVPETLMPALAELEQSAAQAWADPAFTGRLNHLLKTYVGRATPLYEAERLTAHYRRDDG-GPRIWLKREDLNHTGAHKINNALGQALLALRMGKKRIIAETGAGQHGVATATVCARFGLDCVIYMGAEDMRRQALNVFRMRLL 176
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SYNS3 (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9311) GN=trpB PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.550e-38 Identity = 81/152 (53.29%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G++GR+GG++VPETL+ L+ LE +D+ F EL+ L+ YVGR TPLY AERL+ HYR G GP I+LKREDLNH GAHKINNA+GQA++A RMG+K I+A TGAGQHGV V+MG DM +Q+ V M+LL Sbjct: 26 GRYGRYGGQYVPETLMPALAELEQAAAEAWKDSAFTTELNRLLKSYVGRATPLYEAERLSAHYRRSDG-GPRIWLKREDLNHTGAHKINNALGQALLALRMGKKRIIAETGAGQHGVATATVCARFGLECVVYMGAEDMRRQALNVFRMRLL 176
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_STRTD (Tryptophan synthase beta chain OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=trpB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.024e-38 Identity = 79/152 (51.97%), Postives = 104/152 (68.42%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G+FGG+FVPETL+T + L+ + +D+ FQ EL L++YVGRETPLY A+RLTDH G +IYLKREDLNH GAHKINNA+GQ ++AKRMG+K I+A TGAGQHGV ++MG D+++Q+ V M+LL Sbjct: 10 GFYGKFGGQFVPETLMTAVIELDKAYREAKEDSSFQAELDDLLKNYVGRETPLYHAKRLTDHIG-----GAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKKKIIAETGAGQHGVATATAAALFDMDCTIYMGEEDVKRQALNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PROM0 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9301) GN=trpB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.024e-38 Identity = 80/152 (52.63%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG++GG++VPETL+ L LE + +D F EEL+ L+ YVGRETPLY A+RLT+HY+ ++ P I+LKREDLNH GAHKINNA+GQA++A RMG+K I+A TGAGQHGV ++MG D+++QS V MKLL Sbjct: 24 GRFGKYGGQYVPETLMPALFELETAASNAWKDKLFVEELNHLLKTYVGRETPLYEAKRLTEHYKTKQAT-PRIWLKREDLNHTGAHKINNALGQALLAIRMGKKRIIAETGAGQHGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLL 174
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_STRMU (Tryptophan synthase beta chain OS=Streptococcus mutans GN=trpB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.453e-38 Identity = 79/154 (51.30%), Postives = 102/154 (66.23%), Query Frame = 1 Query: 334 NPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 N G +G FGG+F+PETL+T + L+ + D F EEL L+DYVGRETPLYFA+RLTD+ G +IYLKREDLNH GAHKINNA+GQ ++AKRMG+ I+A TGAGQHGV ++MG D+++Q+ V M+LL Sbjct: 8 NNGFYGNFGGQFIPETLMTAVIELDEAYREAKADPSFHEELDALLKDYVGRETPLYFAKRLTDYIG-----GAKIYLKREDLNHTGAHKINNALGQVLLAKRMGKNKIIAETGAGQHGVATATAAALFDMECTIYMGEEDVKRQALNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_STRT2 (Tryptophan synthase beta chain OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=trpB PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.890e-38 Identity = 78/152 (51.32%), Postives = 104/152 (68.42%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G+FGG+FVPETL+T + L+ + +D+ FQ EL L++YVGRETPLY A+RLTDH G +IYLKREDLNH GAHKINNA+GQ ++AKRMG+K I+A TGAGQHGV +++G D+++Q+ V M+LL Sbjct: 10 GFYGKFGGQFVPETLMTAVIELDKAYREAKEDSSFQAELDDLLKNYVGRETPLYHAKRLTDHIG-----GAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKKKIIAETGAGQHGVATATAAALFDMDCTIYVGEEDVKRQALNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_STRZT (Tryptophan synthase beta chain OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=trpB PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.693e-38 Identity = 80/152 (52.63%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G+FGG+FVPETL+T + LE + D FQEEL+ LR YVGRETPLY+A+ LT H G +IYLKREDLNH GAHKINNA+GQ +AKRMG+K I+A TGAGQHGV ++MG D+++Q+ V M+LL Sbjct: 10 GFYGKFGGRFVPETLMTAVLELEKAYRESQADPSFQEELNQLLRQYVGRETPLYYAKNLTQHIG-----GAKIYLKREDLNHTGAHKINNALGQVWLAKRMGKKKIIAETGAGQHGVATATAAALFNMECTIYMGEEDVKRQALNVFRMELL 156 The following BLAST results are available for this feature:
BLAST of CX043277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043277 ID=CX043277; Name=CX043277; organism=Citrus sinensis; type=EST; length=796bpback to top |