CX043277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_KLEP3 (Tryptophan synthase beta chain OS=Klebsiella pneumoniae (strain 342) GN=trpB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.100e-27 Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 1 Query: 331 LNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 LNP FG FGG +VP+ L+ L LE F +D FQ E + L++Y GR T L LT+ G +YLKREDL H GAHK N +GQA++AKRMG+ I+A TGAGQHGV ++MG D+E+QS V M+L+ Sbjct: 5 LNP-YFGEFGGMYVPQILMPALRQLEEAFVSAQKDPAFQAEFTDLLKNYAGRPTALTKCRNLTE------GTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLM 152
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_ENT38 (Tryptophan synthase beta chain OS=Enterobacter sp. (strain 638) GN=trpB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.100e-27 Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 1 Query: 331 LNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 LNP FG FGG +VP+ L+ L LE F +D FQ E + L++Y GR T L LT+ G +YLKREDL H GAHK N +GQA++AKRMG+ I+A TGAGQHGV ++MG D+E+QS V M+L+ Sbjct: 5 LNP-YFGEFGGMYVPQILMPALRQLEEAFVSAQKDPAFQAEFTDLLKNYAGRPTALTKCRNLTE------GTKTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASALACALLGLKCRIYMGAKDIERQSPNVFRMRLM 152
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_ELUMP (Tryptophan synthase beta chain OS=Elusimicrobium minutum (strain Pei191) GN=trpB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.100e-27 Identity = 64/152 (42.11%), Postives = 93/152 (61.18%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G +GG FVP+ LI L+ + FN +FQ+EL ++YVGR +PLY+A ++ G +IYLKREDLNH GAHKIN+ IG+ ++AK+MG+K ++A TGAGQHG+ ++MG D++K+ VL +K L Sbjct: 22 GFYGIYGGVFVPKELIVPLAEIADCFNNTAFTKEFQDELFYYYKNYVGRPSPLYYAANISCG-------GAKIYLKREDLNHTGAHKINHCIGEVLLAKKMGKKRVIAETGAGQHGIAIATAAALLGIECVIYMGEQDVKKEYPNVLKIKTL 166
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_CLAMS (Tryptophan synthase beta chain OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=trpB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.100e-27 Identity = 64/150 (42.67%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 346 FGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 FG FGG++VPE+L+ L L A + + D F EEL R Y GR + + R +H G I LKREDLNH G+HKINN +GQA++ K++G+K I+A TGAGQHGV ++MG D E+Q+ V M+LL Sbjct: 12 FGEFGGRYVPESLVAALDELSAAWEELKVDPAFVEELKELHRTYTGRPSLITEVPRFAEH-----AGGARIILKREDLNHTGSHKINNVLGQALLTKKIGKKRIIAETGAGQHGVATATAAALFGLDCVIYMGEVDTERQALNVARMRLL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SHEON (Tryptophan synthase beta chain OS=Shewanella oneidensis GN=trpB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 68/156 (43.59%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 328 KLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 KLNP FG +GG +VP+ L+ L LE+ F D FQ E + L++Y GR T L L+ + +IYLKREDL H GAHK N +GQA++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+ Sbjct: 5 KLNP-YFGEYGGMYVPQILVPALKQLESAFVEAQTDESFQAEFTDLLKNYAGRPTALTLTRNLSPNPM------VKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLM 153
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SALTY (Tryptophan synthase beta chain OS=Salmonella typhimurium GN=trpB PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 331 LNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 LNP FG FGG +VP+ L+ L+ LE F +D +FQ + + L++Y GR T L + +T G +YLKREDL H GAHK N +GQA++AKRMG+ I+A TGAGQHGV ++MG D+E+QS V M+L+ Sbjct: 5 LNP-YFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNIT------AGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLM 152
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SALTI (Tryptophan synthase beta chain OS=Salmonella typhi GN=trpB PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 331 LNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 LNP FG FGG +VP+ L+ L+ LE F +D +FQ + + L++Y GR T L + +T G +YLKREDL H GAHK N +GQA++AKRMG+ I+A TGAGQHGV ++MG D+E+QS V M+L+ Sbjct: 5 LNP-YFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNIT------AGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLM 152
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SALSV (Tryptophan synthase beta chain OS=Salmonella schwarzengrund (strain CVM19633) GN=trpB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 331 LNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 LNP FG FGG +VP+ L+ L+ LE F +D +FQ + + L++Y GR T L + +T G +YLKREDL H GAHK N +GQA++AKRMG+ I+A TGAGQHGV ++MG D+E+QS V M+L+ Sbjct: 5 LNP-YFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNIT------AGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLM 152
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SALPK (Tryptophan synthase beta chain OS=Salmonella paratyphi A (strain AKU_12601) GN=trpB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 331 LNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 LNP FG FGG +VP+ L+ L+ LE F +D +FQ + + L++Y GR T L + +T G +YLKREDL H GAHK N +GQA++AKRMG+ I+A TGAGQHGV ++MG D+E+QS V M+L+ Sbjct: 5 LNP-YFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNIT------AGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLM 152
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SALPC (Tryptophan synthase beta chain OS=Salmonella paratyphi C (strain RKS4594) GN=trpB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 331 LNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 LNP FG FGG +VP+ L+ L+ LE F +D +FQ + + L++Y GR T L + +T G +YLKREDL H GAHK N +GQA++AKRMG+ I+A TGAGQHGV ++MG D+E+QS V M+L+ Sbjct: 5 LNP-YFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNIT------AGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLM 152 The following BLAST results are available for this feature:
BLAST of CX043277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043277 ID=CX043277; Name=CX043277; organism=Citrus sinensis; type=EST; length=796bpback to top |