CX043277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_HAEI8 (Tryptophan synthase beta chain OS=Haemophilus influenzae (strain 86-028NP) GN=trpB PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.678e-27 Identity = 69/155 (44.52%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 331 LNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 LNP FG FGG +VPE L+ L LE F D FQ E + L++Y GR T L LT K ++YLKREDL H GAHK N +GQ ++AKRMG+ I+A TGAGQHGV V+MG D+E+QS V M+L+ Sbjct: 6 LNP-YFGEFGGMYVPEILVPVLKQLEQAFVEAQNDPTFQAEFADLLKNYAGRPTALTLCRNLT------KCTKTKLYLKREDLLHGGAHKTNQVLGQILLAKRMGKTRIIAETGAGQHGVATALACAMLDMPCRVYMGAKDVERQSPNVFRMRLM 153
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_TOLAT (Tryptophan synthase beta chain OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=trpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 66/150 (44.00%), Postives = 82/150 (54.67%), Query Frame = 1 Query: 346 FGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 FG FGG + P+ L+ L LE F D +FQ E L +Y GR TPL LT KG +IYLKREDL H GAHK N +GQA++AKRMG+ I+A TGAGQHGV ++MG D E+Q V M+L+ Sbjct: 8 FGEFGGMYSPQILMPVLLELEKAFVDAKDDPEFQAEFQHLLTEYAGRPTPLTLCRNLT------KGTKTKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKTRIIAETGAGQHGVATALACALLDLPCRIYMGAVDCERQKPNVFRMRLM 151
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SHESW (Tryptophan synthase beta chain OS=Shewanella sp. (strain W3-18-1) GN=trpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 328 KLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 KLNP FG +GG +VP+ L+ L LE F +D F+ E + L++Y GR T L L+ + +IYLKREDL H GAHK N +GQA++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+ Sbjct: 5 KLNP-YFGEYGGMYVPQILVPALKQLETAFVEAQEDDDFKAEFTDLLKNYAGRPTALTLTRNLSPNPM------VKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLM 153
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SHESR (Tryptophan synthase beta chain OS=Shewanella sp. (strain MR-7) GN=trpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 68/156 (43.59%), Postives = 88/156 (56.41%), Query Frame = 1 Query: 328 KLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 KLNP FG +GG +VP+ L+ L LE F D FQ E + L++Y GR T L L+ + +IYLKREDL H GAHK N +GQA++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+ Sbjct: 5 KLNP-YFGEYGGMYVPQILVPALKQLENAFVEAQADESFQAEFTDLLKNYAGRPTALTLTRNLSPNPM------VKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLM 153
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SHESM (Tryptophan synthase beta chain OS=Shewanella sp. (strain MR-4) GN=trpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 68/156 (43.59%), Postives = 88/156 (56.41%), Query Frame = 1 Query: 328 KLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 KLNP FG +GG +VP+ L+ L LE F D FQ E + L++Y GR T L L+ + +IYLKREDL H GAHK N +GQA++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+ Sbjct: 5 KLNP-YFGEYGGMYVPQILVPALKQLENAFVEAQADESFQAEFTDLLKNYAGRPTALTLTRNLSPNPM------VKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLM 153
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SHESA (Tryptophan synthase beta chain OS=Shewanella sp. (strain ANA-3) GN=trpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 68/156 (43.59%), Postives = 88/156 (56.41%), Query Frame = 1 Query: 328 KLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 KLNP FG +GG +VP+ L+ L LE F D FQ E + L++Y GR T L L+ + +IYLKREDL H GAHK N +GQA++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+ Sbjct: 5 KLNP-YFGEYGGMYVPQILVPALKQLENAFVEAQADESFQAEFTDLLKNYAGRPTALTLTRNLSPNPM------VKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLM 153
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SHEPC (Tryptophan synthase beta chain OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=trpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 328 KLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 KLNP FG +GG +VP+ L+ L LE F +D F+ E + L++Y GR T L L+ + +IYLKREDL H GAHK N +GQA++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+ Sbjct: 5 KLNP-YFGEYGGMYVPQILVPALKQLETAFVEAQEDEDFKAEFTDLLKNYAGRPTALTLTRNLSPNPM------VKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLM 153
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SHEB9 (Tryptophan synthase beta chain OS=Shewanella baltica (strain OS195) GN=trpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 328 KLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 KLNP FG +GG +VP+ L+ L LE F +D F+ E + L++Y GR T L L+ + +IYLKREDL H GAHK N +GQA++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+ Sbjct: 5 KLNP-YFGEYGGMYVPQILVPALKQLETAFVEAQEDDDFKAEFTDLLKNYAGRPTALTLTRNLSPNPM------VKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLM 153
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SHEB8 (Tryptophan synthase beta chain OS=Shewanella baltica (strain OS185) GN=trpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 328 KLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 KLNP FG +GG +VP+ L+ L LE F +D F+ E + L++Y GR T L L+ + +IYLKREDL H GAHK N +GQA++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+ Sbjct: 5 KLNP-YFGEYGGMYVPQILVPALKQLETAFVEAQEDDDFKAEFTDLLKNYAGRPTALTLTRNLSPNPM------VKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLM 153
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SHEB5 (Tryptophan synthase beta chain OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=trpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 328 KLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 KLNP FG +GG +VP+ L+ L LE F +D F+ E + L++Y GR T L L+ + +IYLKREDL H GAHK N +GQA++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+ Sbjct: 5 KLNP-YFGEYGGMYVPQILVPALKQLETAFVEAQEDDDFKAEFTDLLKNYAGRPTALTLTRNLSPNPM------VKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLM 153 The following BLAST results are available for this feature:
BLAST of CX043277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043277 ID=CX043277; Name=CX043277; organism=Citrus sinensis; type=EST; length=796bpback to top |