CX043277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_MYCLE (Tryptophan synthase beta chain OS=Mycobacterium leprae GN=trpB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 340 GKFGR---FGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG +GG++VPE L+ + + A + + F + L +Y GR +PLY A RL+++ + + I+LKREDLNH G+HKINN +GQ ++A+RMG+ ++A TGAGQHGV ++MG D +Q+ V M+LL Sbjct: 24 GHFGGPDGYGGRYVPEALMAVIEEVTAAYEKERVNQDFLDLLDKLQANYAGRPSPLYEATRLSEYAGSVR-----IFLKREDLNHTGSHKINNVLGQTLLAQRMGKTRVIAETGAGQHGVATATACALFGLDCVIYMGALDTARQALNVARMRLL 173
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_HALSA (Tryptophan synthase beta chain OS=Halobacterium salinarium GN=trpB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.840e-23 Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLS-LLEAEFNFVLQDTK-FQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKL 792 G FG +GG++VPE L+ + L +A +VL + F ++ +R + GR TPL A L+ + G ++YLKREDL H GAHK+NNA+GQ ++AK MG+ IVA TGAGQHG ++MG D+ +Q V M+L Sbjct: 13 GTFGDYGGQYVPEVLMPAVEELTDAYERYVLDNEDGFVDDFRQRIRSFGGRPTPLTHAPTLSQRH------GVDVYLKREDLLHGGAHKLNNALGQVLLAKYMGKDRIVAETGAGQHGTATAMACAALEMPCEIYMGRTDVNRQRPNVFRMRL 159
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_HALS3 (Tryptophan synthase beta chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=trpB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.840e-23 Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLS-LLEAEFNFVLQDTK-FQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKL 792 G FG +GG++VPE L+ + L +A +VL + F ++ +R + GR TPL A L+ + G ++YLKREDL H GAHK+NNA+GQ ++AK MG+ IVA TGAGQHG ++MG D+ +Q V M+L Sbjct: 13 GTFGDYGGQYVPEVLMPAVEELTDAYERYVLDNEDGFVDDFRQRIRSFGGRPTPLTHAPTLSQRH------GVDVYLKREDLLHGGAHKLNNALGQVLLAKYMGKDRIVAETGAGQHGTATAMACAALEMPCEIYMGRTDVNRQRPNVFRMRL 159
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_HELHP (Tryptophan synthase beta chain OS=Helicobacter hepaticus GN=trpB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.098e-23 Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 355 FGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKL 792 FGG+++PE L+ L LE ++ V +++EL + + +VGR TPL +A + +N+ IYLK E L + GAHKINNA+GQ ++AK M +K ++A TGAGQHG+ +FMG D+ +Q V M+L Sbjct: 24 FGGQYIPEILLPALKELEKAYHGVFVSKAYKKELKSLFKHFVGRPTPLIYAHNASKILKND------IYLKFEGLANTGAHKINNALGQVLLAKHMKKKRVIAETGAGQHGLATAAACARLGLECEIFMGEIDIARQRPNVFNMEL 163
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB1_CHLCV (Tryptophan synthase beta chain 1 OS=Chlamydophila caviae GN=trpB1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22 Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 355 FGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 +GG++VP L+ L L+ + + +D +F+E L++Y GR TPL + + GP I+LKREDL H GAHKINN +GQ +IAK G+ +VA TGAGQHGV +FMG D+ +Q V +++L Sbjct: 27 YGGQYVPLELVKPLEDLDRSYEQLKKDPQFRETFHHILKNYAGRPTPLTEVKNFSRAIN-----GPRIFLKREDLLHTGAHKINNVLGQCLIAKFQGKTRVVAETGAGQHGVALAAAAAYLGMECVIFMGETDINRQKPNVDRIRVL 168 The following BLAST results are available for this feature:
BLAST of CX043277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043277 ID=CX043277; Name=CX043277; organism=Citrus sinensis; type=EST; length=796bpback to top |