CX043277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_THEP3 (Tryptophan synthase beta chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.475e-36 Identity = 78/152 (51.32%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FGRFGG++VPET++ L LE EF +D F EE LR+Y GR TPLY+AE LT ++ G +IYLKREDLNH GAHKINN +GQ ++AKRM +K ++A TGAGQHGV +FMG D+++QS V MKLL Sbjct: 3 GRFGRFGGQYVPETVMNALIELEREFEKAKEDKDFMEEYRYYLREYSGRPTPLYYAENLT-----KRLGGAKIYLKREDLNHTGAHKINNVLGQILLAKRMNKKRVIAETGAGQHGVATATAAAMFGMECEIFMGEEDIKRQSLNVFRMKLL 149
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PROM5 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9515) GN=trpB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.475e-36 Identity = 77/152 (50.66%), Postives = 105/152 (69.08%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG++GG++VPETL+ L LE + +D +F +EL+ L+ YVGRETPLY A+RLT+HY+ + I+LKREDLNH GAHKINNA+GQA++A RMG++ I+A TGAGQHGV ++MG D+++QS V MKLL Sbjct: 24 GRFGKYGGQYVPETLMPALFELEKAASDAWKDKQFVDELNHLLKTYVGRETPLYEAKRLTEHYQTKTCTS-RIWLKREDLNHTGAHKINNALGQALLAIRMGKERIIAETGAGQHGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLL 174
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PSEF5 (Tryptophan synthase beta chain OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.200e-36 Identity = 77/152 (50.66%), Postives = 100/152 (65.79%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG FGG++V ETL+ + L E+ +D +F +EL+ RDYVGR +PLYFAERLT+H G +IYLKRE+LNH GAHKINN IGQ ++A+RMG+K I+A TGAG HGV ++MGT D+E+Q + V MKLL Sbjct: 14 GLFGAFGGRYVAETLMPLILDLAREYEKAKEDPEFLKELAYFQRDYVGRPSPLYFAERLTEHCG-----GAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGMHGVATATVAARFGLDCVIYMGTTDIERQQANVFRMKLL 160
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_BACC7 (Tryptophan synthase beta chain OS=Bacillus cereus (strain AH187) GN=trpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.200e-36 Identity = 76/152 (50.00%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G +GG++VPETL+ + LE + ++D +FQ+EL+ L+ YVGRETPLYFAE +T++ G +IYLKREDLNH GAHKINN IGQA++A RMG+K +VA TGAGQHGV +FMG D+ +Q V M+LL Sbjct: 10 GHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEEFQKELNHYLKTYVGRETPLYFAENMTEYCG-----GAKIYLKREDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_BACC4 (Tryptophan synthase beta chain OS=Bacillus cereus (strain B4264) GN=trpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.200e-36 Identity = 78/152 (51.32%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G +GG++VPETL+ + LE + +QD FQ+EL+ L+ YVGRETPLYFAE LT + G +IYLKREDLNH GAHKINN IGQA++A RMG+K +VA TGAGQHGV +FMG D+ +Q V M+LL Sbjct: 10 GHYGIYGGRYVPETLMQSVLELEEAYKEAMQDEAFQKELNHYLKTYVGRETPLYFAENLTKYCG-----GAKIYLKREDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_RHOPB (Tryptophan synthase beta chain OS=Rhodopseudomonas palustris (strain BisB18) GN=trpB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.404e-36 Identity = 76/152 (50.00%), Postives = 97/152 (63.82%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG FGG+FV ETL+ + LE + D FQ E+ L+DYVGR +PLYFAERLTDH G +IY KRE+LNH G+HK+NN +GQ M+A+RMG+K I+A TGAGQHGV VFMG D+E+Q V+ M++L Sbjct: 17 GHFGIFGGRFVAETLMPLILDLEKAYAGAKADPSFQREMDGYLKDYVGRPSPLYFAERLTDHLG-----GAKIYFKREELNHTGSHKVNNVLGQIMVARRMGKKRIIAETGAGQHGVATATLCARFGLECIVFMGAVDVERQQPNVIRMQML 163
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_METJA (Tryptophan synthase beta chain OS=Methanocaldococcus jannaschii GN=trpB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.404e-36 Identity = 76/154 (49.35%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFN--FVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 GKFG +GGKFVPETL+ ++ LE F ++ + F+EE LRDYVGR TPLY+AERL++ G ++YLKREDL H+GAHKINNA+GQA++AK+MG+K ++A TGAGQHGV ++MG D+E+Q V M+L+ Sbjct: 16 GKFGIYGGKFVPETLMPAIAELEEAFKRFWINNEGNFREEFYALLRDYVGRPTPLYYAERLSEEL------GCKVYLKREDLAHLGAHKINNALGQALLAKKMGKKRVIAETGAGQHGVATAAACAKLGLECIIYMGAKDVERQKLNVFRMELM 163
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_GEOTN (Tryptophan synthase beta chain OS=Geobacillus thermodenitrificans (strain NG80-2) GN=trpB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.404e-36 Identity = 81/152 (53.29%), Postives = 96/152 (63.16%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG FGGKFVPETL+ L +E E + L D F++E L+ Y GR TPL FA LT G +IYLKREDLNH GAHKINNAIGQA++AKRMG+K ++A TGAGQHGV VFMG DM++Q V MKLL Sbjct: 9 GRFGDFGGKFVPETLMLPLEEIETELDKALADESFRQEYIRILQHYSGRPTPLTFAPNLTRQLG-----GAKIYLKREDLNHTGAHKINNAIGQALLAKRMGKKKLIAETGAGQHGVAAATVAAHFGMECIVFMGEEDMKRQELNVFRMKLL 155
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PSESY (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. syringae GN=trpB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.228e-35 Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG FGG++V ETL+ + L E+ +D F+EEL+ RDYVGR +PLYFAERLT+ G +IYLKRE+LNH GAHKINN IGQ ++A+RMG+K I+A TGAG HGV ++MGT D+E+Q + V MKLL Sbjct: 16 GMFGAFGGRYVAETLMPLILDLAREYEAAKEDPAFKEELAYFQRDYVGRPSPLYFAERLTEFCG-----GAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGMHGVATATVAARFGLQCVIYMGTTDIERQQANVFRMKLL 162
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_BACHK (Tryptophan synthase beta chain OS=Bacillus thuringiensis subsp. konkukian GN=trpB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.228e-35 Identity = 76/152 (50.00%), Postives = 100/152 (65.79%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G +GG++VPETL+ + LE + ++D FQ+EL+ L+ YVGRETPLYFAE +T++ G +IYLKREDLNH GAHKINN IGQA++A RMG+K +VA TGAGQHGV +FMG D+ +Q V M+LL Sbjct: 10 GHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRETPLYFAENMTEYCG-----GAKIYLKREDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELL 156 The following BLAST results are available for this feature:
BLAST of CX043277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043277 ID=CX043277; Name=CX043277; organism=Citrus sinensis; type=EST; length=796bpback to top |