EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.743e-34
Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            +K PE F A+G   PKGVLL GPPGTGKTLLA+A+A      F  +SGSE V+ F+G G+  VR+LF  A+E+AP I+F+DEID++           + E ++T+ +LL ++DGFE    I VI ATNR DILD ALLR
Sbjct:  165 VKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLR 303          

HSP 2 Score: 27.7202 bits (60), Expect = 4.743e-34
Identity = 19/70 (27.14%), Postives = 32/70 (45.71%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGR DR++    P+   +   +K    S K     G++L    E  PG   A+   +  +AG++A  + R
Sbjct:  304 PGRIDRKIEFPPPNEEARLDILK--IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 371          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.506e-34
Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 2
Query:   29 ERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRA 436
            ERF  +G R PKGVLL GPPGTGKTL+A+A A +    F  ++G + V+MF+G GA  VRD F+ AKE APCI+F+DEIDA+           + E ++T+ +LL ++DGF  +  I VIAATNRADILD AL+R+
Sbjct:  195 ERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRS 330          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.506e-34
Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 2
Query:   29 ERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRA 436
            ERF  +G R PKGVLL GPPGTGKTL+A+A A +    F  ++G + V+MF+G GA  VRD F+ AKE APCI+F+DEIDA+           + E ++T+ +LL ++DGF  +  I VIAATNRADILD AL+R+
Sbjct:  195 ERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRS 330          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.354e-33
Identity = 64/143 (44.76%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            +K P+ F  +G   P+GVLL GPPGTGKTLLAKA+A E    FFSI+G E +  + G    ++R++F+ AK+++P I+F+DE+D++            +   + + QLLT MDG EG   +IVIAATNR D +D AL R   F
Sbjct:  209 MKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSI---APKREDVTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRF 348          

HSP 2 Score: 38.891 bits (89), Expect = 1.354e-33
Identity = 23/65 (35.38%), Postives = 34/65 (52.31%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR++ + VPD  G+   +K  T      D   V+L    + T GF  AD  +L ++A + A
Sbjct:  345 PGRFDREIEIGVPDEIGREEILKIHTRGMPLSD--DVNLSTLADDTHGFVGADIESLSKEAAMRA 407          

HSP 3 Score: 130.183 bits (326), Expect = 1.420e-29
Identity = 65/143 (45.45%), Postives = 92/143 (64.34%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            L +PE+FT +G   P GVLL GPPGTGKTL+AKA+A E    F S+ G + +  +VG     +R  F+KA++ AP ++F DE+D++           N+  E+ +NQLLTE+DG E    ++VIAATNR DI+D AL+R+  F
Sbjct:  482 LNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSL--APGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRF 622          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.118e-33
Identity = 70/136 (51.47%), Postives = 94/136 (69.12%), Query Frame = 2
Query:   29 ERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRA 436
            ERF  +G R PKGVLL GPPGTGKTL+A+A A +    F  ++G + V+MF+G GA  VRD F+ AKE +PCI+F+DEIDA+           + E ++T+ +LL ++DGF  +  I VIAATNRADILD AL+R+
Sbjct:  194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 329          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.014e-33
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 2
Query:   29 ERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            E +  +G   P+GVLL GPPGTGKT+LAKA+A      F  + GSEFV+ ++G G   VRD+F+ AKENAP I+F+DE+DA+           + E ++ L +LL +MDGF+    + VI ATNRAD LD ALLR
Sbjct:  179 ELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLR 313          

HSP 2 Score: 30.8018 bits (68), Expect = 3.014e-33
Identity = 26/88 (29.55%), Postives = 38/88 (43.18%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQVAIV--FEKK*PIQVKR 692
            PGR DR++   +PD R K    +  T      D   V L     +     AA+ A + ++AG+ A    R V +   FEK     VK+
Sbjct:  314 PGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDE--VDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKK 399          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.114e-33
Identity = 63/133 (47.37%), Postives = 87/133 (65.41%), Query Frame = 2
Query:   35 FTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            +  +G   P+GVLL GPPGTGKT+LAKA+A      F  + GSEFV+ ++G G   VRD+F+ A+EN+P I+F+DEIDA+           + E ++ L +LL +MDGF+ +  + VI ATNR D LD ALLR
Sbjct:  176 YKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLR 308          

HSP 2 Score: 35.4242 bits (80), Expect = 5.114e-33
Identity = 25/92 (27.17%), Postives = 44/92 (47.83%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGS-NKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQVAIV--FEKK*PIQVKRNVH 701
            PGR DR++   +PD R K    +  T   N   + +    + +P++  G   A+  ++ ++AG+ A    R V +   FEK     +K+N H
Sbjct:  309 PGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSG---AEIQSICQEAGMHAIRKNRYVILPKDFEKGYKASIKKNTH 397          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.161e-33
Identity = 69/136 (50.74%), Postives = 94/136 (69.12%), Query Frame = 2
Query:   29 ERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRA 436
            +RF  +G R PKGVLL GPPGTGKTL+A+A A +    F  ++G + V+MF+G GA  VRD F+ AKE +PCI+F+DEIDA+           + E ++T+ +LL ++DGF  +  I VIAATNRADILD AL+R+
Sbjct:  200 DRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRS 335          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.470e-32
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 2
Query:   29 ERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            E +  +G   P+GVL+ GPPG GKT+LAKA+A      F  + GSEFV+ ++G G   VRD+F+ AKENAP I+F+DEIDA+           + E ++ L +LL +MDGF+ N  + VI ATNRAD LD ALLR
Sbjct:  189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLR 323          

HSP 2 Score: 30.0314 bits (66), Expect = 1.470e-32
Identity = 22/94 (23.40%), Postives = 41/94 (43.62%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGS-NKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQVAIV--FEKK*PIQVKRNVHSH 707
            PGR DR++   +PD R K       T   N   + +    + +P++  G   AD  ++ +  G+ A  +   + +   FEK     +K++   H
Sbjct:  324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISG---ADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQEH 414          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 1.793e-32
Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 2
Query:   29 ERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRA 436
            E+F  +G R PKGVLL GPPGTGKTL+A+A A +    F  ++G + V+MF+G GA  VRD F  AKE +PCI+F+DEIDA+           + E ++T+ +LL ++DGF  +  I VIAATNRADILD AL+R+
Sbjct:  194 EQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 329          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
PRS8_MANSE4.743e-3451.0826S protease regulatory subunit 8 OS=Manduca sexta... [more]
PS6AA_ARATH9.506e-3452.2126S protease regulatory subunit 6A homolog A OS=Ar... [more]
PRS6A_BRACM9.506e-3452.2126S protease regulatory subunit 6A homolog OS=Bras... [more]
CDCH_HALSA1.354e-3344.76Protein cdcH OS=Halobacterium salinarium GN=cdcH P... [more]
PRS6A_SOLLC2.118e-3351.4726S protease regulatory subunit 6A homolog OS=Sola... [more]
PRS6B_ARATH3.014e-3348.8926S protease regulatory subunit 6B homolog OS=Arab... [more]
PRS6B_DICDI5.114e-3347.3726S protease regulatory subunit 6B homolog OS=Dict... [more]
PRS6A_ORYSJ6.161e-3350.7426S protease regulatory subunit 6A homolog OS=Oryz... [more]
PRS6B_MOUSE1.470e-3248.8926S protease regulatory subunit 6B OS=Mus musculus... [more]
PS6AB_ARATH1.793e-3250.7426S protease regulatory subunit 6A homolog B OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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