EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 9.284e-39
Identity = 78/143 (54.55%), Postives = 94/143 (65.73%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK+PE F  VG   PKGVLL GPPGTGKTLLAKA+A  A   F  ++  E V+ F+G GA  VR+LF+ A+E AP I+F+DEIDA+           + E ++TL QLL EMDGF+    I VIAATNR DILD ALLR   F
Sbjct:  199 LKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRF 341          

HSP 2 Score: 36.1946 bits (82), Expect = 9.284e-39
Identity = 22/72 (30.56%), Postives = 32/72 (44.44%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQV 650
            PGRFDR + + +PD  G+    K  T       A  V L    + T G   AD   +  +AG+ A  + R +
Sbjct:  338 PGRFDRHIKIPLPDEEGRYEIFKIHTRDMNL--AEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDI 407          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.055e-38
Identity = 76/143 (53.15%), Postives = 89/143 (62.24%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPG GKTL+AKA+A E    F  + GSE V  ++G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLR   F
Sbjct:  160 LKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRF 302          

HSP 2 Score: 40.817 bits (94), Expect = 2.055e-38
Identity = 24/70 (34.29%), Postives = 34/70 (48.57%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD  G+   +K  T   ++     V L    E T G   AD   +  +AG+FA  + R
Sbjct:  299 PGRFDRLIEVPLPDFEGRLEILKVHT---RRMKLKNVDLRVIAEITEGASGADLKAIATEAGMFAIRERR 365          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.705e-37
Identity = 73/143 (51.05%), Postives = 95/143 (66.43%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            L  PE+F AVG   P GVLL GPPGTGKT+LAKA+A +    F  ++GSE V  F+G G+  VRDLF+ A++  P I+F+DEIDAV           + E ++T+ QLL+EMDGF+    I +IAATNR D+LDSA+LR   F
Sbjct:  172 LVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRF 314          

HSP 2 Score: 36.1946 bits (82), Expect = 1.705e-37
Identity = 23/70 (32.86%), Postives = 32/70 (45.71%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V  P+   + R ++   G      A+ V        T  F  A  A+L  +AG+FA  D R
Sbjct:  311 PGRFDRLIEVPNPNPDARERILEIHAGEMNV--ADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDR 378          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.891e-37
Identity = 77/143 (53.85%), Postives = 93/143 (65.03%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK+PE FT +G   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ ++G GA  VR+LF  AK+ AP I+F+DEIDAV           + E ++TL QLL  MDGFE    + +I ATNR DILD ALLR   F
Sbjct:  198 LKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRF 340          

HSP 2 Score: 31.5722 bits (70), Expect = 2.891e-37
Identity = 29/102 (28.43%), Postives = 46/102 (45.10%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQVAIVFEKK*PIQVKRNVHSHPTQSPSPNTGR 740
            PGRFDR + + +PD  G+   +K  T +    +   V+L      T G   AD   +  +AG++A  + R      +    I+  R   SH   SP+ + GR
Sbjct:  337 PGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEET--VNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKVRLDFSH---SPTDSEGR 433          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.894e-37
Identity = 73/143 (51.05%), Postives = 94/143 (65.73%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            L KPE F  VG   PKGVLL GPPGTGKTLLAKA+A +    F  + GSEFV+ ++G GA  VR++F+ AKE AP I+F+DE+DA+           + E ++T+ QLL E+DGF+    + VI ATNR DILD A+LR   F
Sbjct:  161 LLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRF 303          

HSP 2 Score: 34.2686 bits (77), Expect = 2.894e-37
Identity = 23/70 (32.86%), Postives = 31/70 (44.29%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +P   G+ +  K  T   K   A  V        T G   AD   +  +AG+FA  + R
Sbjct:  300 PGRFDRIIEVPLPTFEGRIQIFKIHTRKMKL--AEDVDFKELARITEGASGADIKAICTEAGMFAIREER 367          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 2.895e-37
Identity = 75/143 (52.45%), Postives = 92/143 (64.34%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  +G   PKGVLL GPPGTGKTLLAKA+A E+   F  +  SEF + FVG GA  VR++F+ A+  AP IVF+DEIDA+             E ++TL QLL E+DGF+    + +IAATNR DILD ALLR   F
Sbjct:  154 LKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRF 296          

HSP 2 Score: 36.5798 bits (83), Expect = 2.895e-37
Identity = 23/71 (32.39%), Postives = 35/71 (49.30%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDR + V +P+  G+ ++I R      K D N +        T GF  A+   +  +AG  A  +GR+
Sbjct:  293 PGRFDRLIEVPLPNFEGR-KEIFRIYLQKMKTDGN-IRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRK 361          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 8.329e-37
Identity = 75/143 (52.45%), Postives = 93/143 (65.03%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            L KPE F  VG   PKGVLL GPPGTGKTLLAKA+A      F  I GSE V+ ++G GA  VR+LF+ AKE +P I+F+DEID++           + E ++TL QLL EMDGF+    + ++AATNR DILD ALLR   F
Sbjct:  179 LLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRF 321          

HSP 2 Score: 32.7278 bits (73), Expect = 8.329e-37
Identity = 22/72 (30.56%), Postives = 34/72 (47.22%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQV 650
            PGRFDR + V +P    + + +K    + K   A+ V L      T     AD + +  +AG+FA  + R V
Sbjct:  318 PGRFDRMIKVPMPTAEAREQILK--IHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDV 387          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.414e-36
Identity = 73/143 (51.05%), Postives = 93/143 (65.03%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            L KP+ F  VG   PKGVLL GPPGTGKTLLA+A+A +    F  + GSE V+ ++G GA  VR+LF  AK+ AP I+F+DEIDA+           + E ++TL QLL EMDGF+    + ++AATNR DILD ALLR   F
Sbjct:  173 LTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRF 315          

HSP 2 Score: 33.113 bits (74), Expect = 1.414e-36
Identity = 21/65 (32.31%), Postives = 31/65 (47.69%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR + + +PD +G+   +K  T          V+L      T G   AD   +  +AG+FA
Sbjct:  312 PGRFDRMIEIPLPDHQGRLAILKIHT--QYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFA 374          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.842e-36
Identity = 71/143 (49.65%), Postives = 93/143 (65.03%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            +K P  F  +G   PKGVLL GPPGTGKTLLAKA+AGE    F  + GSE V  F+G GA  VR++F+ A+E AP I+F+DEIDA+           + E ++T+ QLL E+DGF+    + VIAATNR D++D A+LR   F
Sbjct:  159 IKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRF 301          

HSP 2 Score: 36.5798 bits (83), Expect = 1.842e-36
Identity = 25/72 (34.72%), Postives = 34/72 (47.22%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQV 650
            PGRFDR + V +P +RG+   +   T   K   A  V L    + T GF  AD   +  +AG  A   G +V
Sbjct:  298 PGRFDRIIEVPLPSLRGRLEILGIHTRKAKM--APDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRV 367          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.125e-36
Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LKKPE F  +G   PKGVLL GPPGTGKTLLA+A+A +    F  + GSE V+ ++G GA  VR+LF+ AK+ +P I+F+DEIDA+           + E  +TL QLL EMDGF     + +I ATNR DILD ALLR   F
Sbjct:  173 LKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRF 315          

HSP 2 Score: 34.6538 bits (78), Expect = 3.125e-36
Identity = 23/68 (33.82%), Postives = 34/68 (50.00%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIK-RFTGSN--KKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR + +  PDI G+   +     G N  KK D   ++      +T G   AD  ++  +AG+FA
Sbjct:  312 PGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIA-----TRTDGKNGADLRSICMEAGMFA 374          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
PSMR_METKA9.284e-3954.55Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PSMR_PYRAB2.055e-3853.15Proteasome-activating nucleotidase OS=Pyrococcus a... [more]
PSMR1_HALSA1.705e-3751.05Proteasome-activating nucleotidase 1 OS=Halobacter... [more]
PSMR_METB62.891e-3753.85Proteasome-activating nucleotidase OS=Methanoregul... [more]
PSMR_ARCFU2.894e-3751.05Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
PSMR_SULTO2.895e-3752.45Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PSMR_UNCMA8.329e-3752.45Proteasome-activating nucleotidase OS=Uncultured m... [more]
PSMR_METMJ1.414e-3651.05Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR_AERPE1.842e-3649.65Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]
PSMR_METPE3.125e-3651.05Proteasome-activating nucleotidase OS=Methanosphae... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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