EY665459 | Citrus Genome Database

Overview


Name	EY665459
Unique Name	EY665459
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	834

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 5.301e-36
Identity = 68/143 (47.55%), Postives = 93/143 (65.03%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            L +PERF  +G   PKGVLL G PGTGKTLLAKA+A      F  + GSE V+ ++G G+  VR++F+ A++ AP I+F+DE+D++           + E ++TL QLL EMDGF+    I +IAATNR D+LD A+LR   F
Sbjct:  179 LIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRF 321

HSP 2 Score: 36.965 bits (84), Expect = 5.301e-36
Identity = 22/65 (33.85%), Postives = 31/65 (47.69%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR V V +P I  + + +K   G  K   A  +      + T G   AD   +  +AG+FA
Sbjct:  318 PGRFDRLVHVPMPGIEARGKILKIHCG--KMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFA 380

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 6.840e-36
Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            LK  E F  +G R PKGVLL GPPGTGKTLLAKA+A E+G  F S+ G E    +VG     +R++F+KA+++APCI+F DEIDA+           +   ++ +NQLLTE+DG E    ++VIAATNR DI+D ALLR
Sbjct:  472 LKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAI--APKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLR 608

HSP 2 Score: 32.7278 bits (73), Expect = 6.840e-36
Identity = 22/65 (33.85%), Postives = 31/65 (47.69%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGR DR + V VPD + +    K  T S     A  V+L    ++T G+  AD   L  +A + A
Sbjct:  609 PGRLDRVILVPVPDEKARLDIFKIHTRSMNL--AEDVNLEELAKKTEGYTGADIEALCREAAMLA 671

HSP 3 Score: 129.413 bits (324), Expect = 3.603e-34
Identity = 68/143 (47.55%), Postives = 91/143 (63.64%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            ++ PE F  +G   PKGVLLVGPPGTGKTLLAKA+A EAG  F+ I+G E +  +VG     +R +F++A+ENAP I+F+DEIDA+            +   + + QLLT MDG +G   ++VI ATNR + LD AL R   F
Sbjct:  199 MRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAI---APKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRF 338

HSP 4 Score: 37.3502 bits (85), Expect = 3.603e-34
Identity = 23/65 (35.38%), Postives = 34/65 (52.31%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR++ + VPD  G+   ++  T +     A  V L    + T GF  AD A L ++A + A
Sbjct:  335 PGRFDREIVIGVPDREGRKEILQIHTRNMPL--AEDVDLDYLADVTHGFVGADLAALCKEAAMRA 397

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 6.907e-36
Identity = 74/143 (51.75%), Postives = 91/143 (63.64%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            + +P+ F  +G   PKGVLL GPPGTGKTLLAKA+A E    F    GSE V+ ++G GA  VR+LF  AKE AP IVF+DEIDA+           + E ++TL QLL  MDGFE    + +I ATNR DILD+ALLR   F
Sbjct:  173 MTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRF 315

HSP 2 Score: 33.8834 bits (76), Expect = 6.907e-36
Identity = 21/65 (32.31%), Postives = 31/65 (47.69%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR + + +PD  G+   +K  T       +  V LM     T G   A+   +  +AG+FA
Sbjct:  312 PGRFDRIIEIPLPDTEGRYSILKVHTRCMNL--SEDVDLMEVARLTEGRNGAELNAICMEAGMFA 374

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.172e-35
Identity = 68/143 (47.55%), Postives = 92/143 (64.34%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            L  PERF  +G   PKGVLL G PGTGKTLLAKA+A      F  + GSE V+ ++G G+  VR++F+ A++ AP I+F+DE+D++           + E ++TL QLL EMDGF+    I +IAATNR D+LD A+LR   F
Sbjct:  179 LTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRF 321

HSP 2 Score: 35.4242 bits (80), Expect = 1.172e-35
Identity = 21/65 (32.31%), Postives = 30/65 (46.15%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR V V +P I  + + +K      K   A  +      + T G   AD   +  +AG+FA
Sbjct:  318 PGRFDRLVHVPMPGIEARGKILK--IHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFA 380

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.972e-35
Identity = 66/143 (46.15%), Postives = 91/143 (63.64%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            ++ PE F  +G   PKG+LL GPPGTGKTLLA+A+A E G  F +++G E +  F G    R+R++FK+A+ENAP I+F+DEIDA+            +  ++ + QLLT MDG +G   +IVI ATNR D +D AL R   F
Sbjct:  232 MRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAI---APKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRF 371

HSP 2 Score: 41.2022 bits (95), Expect = 1.972e-35
Identity = 24/65 (36.92%), Postives = 36/65 (55.38%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR++ +  PD +G+ +DI +    N     + V L    E T G+  AD A L ++A I+A
Sbjct:  368 PGRFDREIEIRPPDTKGR-KDILQVHTRNMPI-TDDVDLDKLAEMTYGYTGADLAALAKEAAIYA 430

HSP 3 Score: 129.028 bits (323), Expect = 3.220e-32
Identity = 67/143 (46.85%), Postives = 90/143 (62.94%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            L+ PE FT  G   PKG+LL GPPGTGKT+LAKA+A E+G  F ++ G E +  +VG     +R++F+KA++ AP ++F DEID++             ER   +NQLL EMDG      +++IAATNR DILD ALLR   F
Sbjct:  507 LRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTER--IVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRF 647

HSP 4 Score: 31.187 bits (69), Expect = 3.220e-32
Identity = 23/65 (35.38%), Postives = 30/65 (46.15%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR + V  PD   +   +K  T +     A  VSL    E+  G+  AD   L  +A I A
Sbjct:  644 PGRFDRLIYVPPPDKTARFEILKVHTKNVPL--AEDVSLEDIAEKAEGYTGADLEALVREATINA 706

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 2.590e-35
Identity = 70/143 (48.95%), Postives = 93/143 (65.03%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            +K P  F  VG   P GVLL GPPGTGKTL+AKA+A +    F  ++GSE V  F+G GA  VRDLF+ A+++ P +VF+DEIDA+           + E ++T+ QLL+EMDGF+    I +IAATNR D+LD A+LR   F
Sbjct:  169 MKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRF 311

HSP 2 Score: 33.113 bits (74), Expect = 2.590e-35
Identity = 21/70 (30.00%), Postives = 32/70 (45.71%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V  P++ G+ +  +  T +     A+ V        T     AD   +  +AG+FA  D R
Sbjct:  308 PGRFDRLIEVPHPNVGGREKIFRIHTRAMNV--ADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDR 375

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.395e-35
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            +K PE F A+G   PKGVLL GPPGTGKTLLA+A+A      F  +SGSE V+ F+G GA  VR+LF  A+E+AP I+F+DEID++           + E ++T+ +LL ++DGFE    I VI ATNR DILDSALLR
Sbjct:  169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307

HSP 2 Score: 27.7202 bits (60), Expect = 4.395e-35
Identity = 19/70 (27.14%), Postives = 32/70 (45.71%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGR DR++    P+   +   +K    S K     G++L    E  PG   A+   +  +AG++A  + R
Sbjct:  308 PGRIDRKIEFPPPNEEARLDILK--IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.395e-35
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            +K PE F A+G   PKGVLL GPPGTGKTLLA+A+A      F  +SGSE V+ F+G GA  VR+LF  A+E+AP I+F+DEID++           + E ++T+ +LL ++DGFE    I VI ATNR DILDSALLR
Sbjct:  169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307

HSP 2 Score: 27.7202 bits (60), Expect = 4.395e-35
Identity = 19/70 (27.14%), Postives = 32/70 (45.71%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGR DR++    P+   +   +K    S K     G++L    E  PG   A+   +  +AG++A  + R
Sbjct:  308 PGRIDRKIEFPPPNEEARLDILK--IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.395e-35
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            +K PE F A+G   PKGVLL GPPGTGKTLLA+A+A      F  +SGSE V+ F+G GA  VR+LF  A+E+AP I+F+DEID++           + E ++T+ +LL ++DGFE    I VI ATNR DILDSALLR
Sbjct:  169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307

HSP 2 Score: 27.7202 bits (60), Expect = 4.395e-35
Identity = 19/70 (27.14%), Postives = 32/70 (45.71%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGR DR++    P+   +   +K    S K     G++L    E  PG   A+   +  +AG++A  + R
Sbjct:  308 PGRIDRKIEFPPPNEEARLDILK--IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375

[Close]

BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.395e-35
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 2

Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            +K PE F A+G   PKGVLL GPPGTGKTLLA+A+A      F  +SGSE V+ F+G GA  VR+LF  A+E+AP I+F+DEID++           + E ++T+ +LL ++DGFE    I VI ATNR DILDSALLR
Sbjct:  169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307

HSP 2 Score: 27.7202 bits (60), Expect = 4.395e-35
Identity = 19/70 (27.14%), Postives = 32/70 (45.71%), Query Frame = 3

Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGR DR++    P+   +   +K    S K     G++L    E  PG   A+   +  +AG++A  + R
Sbjct:  308 PGRIDRKIEFPPPNEEARLDILK--IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375

The following BLAST results are available for this feature:

BLAST of EY665459 vs. ExPASy Swiss-Prot

BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380


Match Name	E-value	Identity	Description
PSMR_METAC	5.301e-36	47.55	Proteasome-activating nucleotidase OS=Methanosarci...	[more]
Y1156_METJA	6.840e-36	51.08	Cell division cycle protein 48 homolog MJ1156 OS=M...	[more]
PSMR_METHJ	6.907e-36	51.75	Proteasome-activating nucleotidase OS=Methanospiri...	[more]
PSMR_METMA	1.172e-35	47.55	Proteasome-activating nucleotidase OS=Methanosarci...	[more]
SAV_SULAC	1.972e-35	46.15	Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE...	[more]
PSMR2_HALSA	2.590e-35	48.95	Proteasome-activating nucleotidase 2 OS=Halobacter...	[more]
PRS8_RAT	4.395e-35	52.52	26S protease regulatory subunit 8 OS=Rattus norveg...	[more]
PRS8_PIG	4.395e-35	52.52	26S protease regulatory subunit 8 OS=Sus scrofa GN...	[more]
PRS8_MOUSE	4.395e-35	52.52	26S protease regulatory subunit 8 OS=Mus musculus ...	[more]
PRS8_HUMAN	4.395e-35	52.52	26S protease regulatory subunit 8 OS=Homo sapiens ...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC