EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.685e-20
Identity = 60/144 (41.67%), Postives = 80/144 (55.56%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG---IIVIAATNRADILDSALLRAWT 442
            +PE FT  G R P KG+LL GPPG GKTLLA+A+A E    F +IS +     +VG G   VR LF  A+   P I+F+DE+D++           ++   +   + L E DG  GN     I+V+AATNR   LD A LR +T
Sbjct:  517 RPELFT--GLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSL---LSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFT 655          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: TBP7_CAEEL (TAT-binding homolog 7 OS=Caenorhabditis elegans GN=lex-1 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.322e-20
Identity = 56/145 (38.62%), Postives = 75/145 (51.72%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA-----GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            PE F       PKGV+  GPPGTGKTL+A+A+A E       V FF   G++ +  +VG    ++R LF +A    P I+F DEID +           +      ++ LL  MDG +G   ++VI ATNR D LD AL R   F
Sbjct:  414 PEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGL---APVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRF 555          

HSP 2 Score: 30.4166 bits (67), Expect = 3.322e-20
Identity = 17/61 (27.87%), Postives = 30/61 (49.18%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQA 617
            PGRFDR++   +PD+  + + +   T   ++      +L    E+T G+  AD   L  +A
Sbjct:  552 PGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEA 612          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.507e-20
Identity = 60/144 (41.67%), Postives = 80/144 (55.56%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN---TGIIVIAATNRADILDSALLRAWT 442
            +PE FT  G R P KG+LL GPPG GKTLLA+A+A E    F +IS +     +VG G   VR LF  A+   P I+F+DE+D++           ++   +   + L E DG  GN     I+V+AATNR   LD A LR +T
Sbjct:  516 RPELFT--GLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSL---LSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRRFT 654          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SPAST_DROPS (Spastin OS=Drosophila pseudoobscura pseudoobscura GN=spas PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.507e-20
Identity = 60/144 (41.67%), Postives = 80/144 (55.56%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG---IIVIAATNRADILDSALLRAWT 442
            +PE FT  G R P KG+LL GPPG GKTLLA+A+A E    F +IS +     +VG G   VR LF  A+   P I+F+DE+D++           ++   +   + L E DG  GN     I+V+AATNR   LD A LR +T
Sbjct:  535 RPELFT--GLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSL---LSERSSGEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFT 673          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SPAST_DROPE (Spastin OS=Drosophila persimilis GN=spas PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.507e-20
Identity = 60/144 (41.67%), Postives = 80/144 (55.56%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG---IIVIAATNRADILDSALLRAWT 442
            +PE FT  G R P KG+LL GPPG GKTLLA+A+A E    F +IS +     +VG G   VR LF  A+   P I+F+DE+D++           ++   +   + L E DG  GN     I+V+AATNR   LD A LR +T
Sbjct:  535 RPELFT--GLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSL---LSERSSGEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFT 673          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SPAST_DANRE (Spastin OS=Danio rerio GN=spast PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.507e-20
Identity = 59/140 (42.14%), Postives = 82/140 (58.57%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVIAATNRADILDSALLR 433
            +PE FT  G R P +G+LL GPPG GKT+LAKA+A E+   FF+IS +     +VG G   VR LF  A+E  P I+F+DEID++           +D   +   + L E DG +  G+  ++V+ ATNR   LD A+LR
Sbjct:  317 RPELFT--GLRAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSL---LCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLR 451          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.580e-20
Identity = 60/144 (41.67%), Postives = 80/144 (55.56%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN---TGIIVIAATNRADILDSALLRAWT 442
            +PE FT  G R P KG+LL GPPG GKTLLA+A+A E    F +IS +     +VG G   VR LF  A+   P I+F+DE+D++           ++   +   + L E DG  GN     I+V+AATNR   LD A LR +T
Sbjct:  512 RPELFT--GLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSL---LSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRRFT 650          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.982e-20
Identity = 61/144 (42.36%), Postives = 82/144 (56.94%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTL---NQLLTEMDGFEGNTGI--IVIAATNRADILDSALLR 433
            L++P+ FT V    P+GVLL GPPGTGKTL+AK+IA +A   FFSI+ S     +VG     V+ LF  A  + P I+F+DE+D++            +E E TL   N+ L  +DG   N  I  +VI ATNR   LD A+ R
Sbjct:  270 LRRPDLFTGVRCP-PRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSA------NENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR 406          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.812e-20
Identity = 64/159 (40.25%), Postives = 86/159 (54.09%), Query Frame = 2
Query:   14 FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA----PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            FL K E +     R PKGVLL GPPG GKTL+AKA+A                EA   F +I G E +  FVG     +R +F++A+E A    P IVF DE+D++           +D     + QLL+E+DG EG   +IVI A+NR D++D A+LR
Sbjct:  272 FLHK-ELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSI--FRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILR 427          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: MPA_MYCLE (Proteasome-associated ATPase OS=Mycobacterium leprae GN=mpa PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.812e-20
Identity = 64/159 (40.25%), Postives = 86/159 (54.09%), Query Frame = 2
Query:   14 FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA----PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            FL K E +     R PKGVLL GPPG GKTL+AKA+A                EA   F +I G E +  FVG     +R +F++A+E A    P IVF DE+D++           +D     + QLL+E+DG EG   +IVI A+NR D++D A+LR
Sbjct:  272 FLHK-ELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSI--FRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILR 427          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
SPAST_DROAN2.685e-2041.67Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1[more]
TBP7_CAEEL3.322e-2038.62TAT-binding homolog 7 OS=Caenorhabditis elegans GN... [more]
SPAST_DROVI3.507e-2041.67Spastin OS=Drosophila virilis GN=spas PE=3 SV=1[more]
SPAST_DROPS3.507e-2041.67Spastin OS=Drosophila pseudoobscura pseudoobscura ... [more]
SPAST_DROPE3.507e-2041.67Spastin OS=Drosophila persimilis GN=spas PE=3 SV=1[more]
SPAST_DANRE3.507e-2042.14Spastin OS=Danio rerio GN=spast PE=2 SV=2[more]
SPAST_DROMO4.580e-2041.67Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1[more]
FIGL1_DROME5.982e-2042.36Fidgetin-like protein 1 OS=Drosophila melanogaster... [more]
MPA_MYCTU7.812e-2040.25Proteasome-associated ATPase OS=Mycobacterium tube... [more]
MPA_MYCLE7.812e-2040.25Proteasome-associated ATPase OS=Mycobacterium lepr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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