EY665459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: MPA_MYCBO (Proteasome-associated ATPase OS=Mycobacterium bovis GN=mpa PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.812e-20 Identity = 64/159 (40.25%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 14 FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA----PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433 FL K E + R PKGVLL GPPG GKTL+AKA+A EA F +I G E + FVG +R +F++A+E A P IVF DE+D++ +D + QLL+E+DG EG +IVI A+NR D++D A+LR Sbjct: 272 FLHK-ELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSI--FRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILR 427
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SPAST_DICDI (Spastin OS=Dictyostelium discoideum GN=DDB_G0287165 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.333e-19 Identity = 57/139 (41.01%), Postives = 81/139 (58.27%), Query Frame = 2 Query: 23 KPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433 +P+ FT + A PKG+LL GPPG GKT++AKA+A E+ V FFSIS S +VG G VR LF A P I+F+DEID++ ++ + ++L + DG G+ ++V+ ATNR + LD A LR Sbjct: 406 RPDVFTGLRAP-PKGLLLFGPPGNGKTMIAKAVAYESKVTFFSISSSSLTSKYVGDGEKLVRALFAVATHFQPSIIFIDEIDSL---LTERSSNESEASRRLKTEILVQFDGARTNGDERVLVMGATNRPEDLDDAALR 540
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.333e-19 Identity = 57/150 (38.00%), Postives = 82/150 (54.67%), Query Frame = 2 Query: 14 FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGI---------IVIAATNRADILDSALLRA 436 ++ P ++ +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF + GA+++ ++F A+ NAP VFVDEIDA+ + R T L+ ++DG + TGI I I ATNR D LD +R+ Sbjct: 511 YMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKS-GAAKINEMFSIARRNAPAFVFVDEIDAI----AGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRS 655
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SPAST_IXOSC (Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.740e-19 Identity = 59/145 (40.69%), Postives = 81/145 (55.86%), Query Frame = 2 Query: 23 KPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT---LNQLLTEMDGFE--GNTGIIVIAATNRADILDSALLRAWT 442 +PE FT + A PKG+LL GPPG GKT+LAKA+A E+ F +IS + +VG G VR LF A+E P I+F+DE+D++ ++E E T + L E DG ++V+ ATNR LD A LR +T Sbjct: 396 RPELFTGLRAP-PKGLLLFGPPGNGKTMLAKAVAHESNSTFLNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL------LSERKDNEHEATRRLKTEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALRRFT 533
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: MPA_RHOER (Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=mpa PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.740e-19 Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 14 FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA----PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433 FL K + F R PKGVLL GPPG GKTL+AKA+A +A F +I G E + FVG +R +F++A+E A P IVF DE+D++ +D + QLL+E+DG EG +IVI A+NR D++D A+LR Sbjct: 254 FLHK-DLFHEYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKIAEARGQDSKDAKSYFLNIKGPELLNKFVGETERHIRMIFQRAREKASEGTPVIVFFDEMDSI--FRTRGSGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILR 409
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.273e-19 Identity = 56/140 (40.00%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLR 433 +K P+ F+ G + G+LL GPPGTGK+ LAKA+A EAG FFSIS S+ V ++G VR LF+ A+E P I+F+DEID++ ++ + + L +M+G + +G++V+ ATN LDSA+ R Sbjct: 149 IKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSL---CGSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR 284
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: TBP7_YEAST (TAT-binding homolog 7 OS=Saccharomyces cerevisiae GN=YTA7 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 2.714e-19 Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 2 Query: 26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG-----EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQ----TLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445 PE + P+GVL GPPGTGKTL+A+A+A E + FF G++ + +VG ++R LF++AK++ P I+F DEID + + ++EQ ++ LL MDG + +IVI ATNR D +D AL R F Sbjct: 436 PELYQNFNITPPRGVLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGL-------APVRSSKQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRF 577 HSP 2 Score: 25.7942 bits (55), Expect = 2.714e-19 Identity = 16/66 (24.24%), Postives = 32/66 (48.48%), Query Frame = 3 Query: 435 PGRFDRQVTVDVPDIRGKNRDIKRFTGS-NKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629 PGRFDR+ +PD++ + + ++ T + N + + T G+ AD +L +A + + Sbjct: 574 PGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLA--FLTKGYGGADLRSLCTEAALIS 637
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.877e-19 Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 17 LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLR 433 +K P FT G R P +G+LL GPPGTGK+ LAKA+A EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ ++ + + L +M G N GI+V+ ATN +LDSA+ R Sbjct: 154 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR 290
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.877e-19 Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 17 LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLR 433 +K P FT G R P +G+LL GPPGTGK+ LAKA+A EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ ++ + + L +M G N GI+V+ ATN +LDSA+ R Sbjct: 154 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR 290
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.877e-19 Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 17 LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLR 433 +K P FT G R P +G+LL GPPGTGK+ LAKA+A EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ ++ + + L +M G N GI+V+ ATN +LDSA+ R Sbjct: 154 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR 290 The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bpback to top |