EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.614e-19
Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 2
Query:   17 LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLR 433
            +K P  FT  G R P +G+LL GPPGTGK+ LAKA+A EA    FFSIS S+ V  ++G     V++LF+ A+EN P I+F+DEID++           ++   +   + L +M G    N GI+V+ ATN   +LDSA+ R
Sbjct:  154 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSENESEAARRIKTEFLVQMRGVGVDNDGILVLGATNIPWVLDSAIRR 290          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.128e-18
Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433
            + +P+ FT +    PKG+LL GPPGTGKTL+ K IA ++G  FFSIS S     +VG G   VR LF  A+   P ++F+DEID++           ++   +   + L ++DG        I+V+ ATNR   +D A  R
Sbjct:  424 MMRPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSL---LSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 560          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.128e-18
Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433
            + +P+ FT +    PKG+LL GPPGTGKTL+ K IA ++G  FFSIS S     +VG G   VR LF  A+   P ++F+DEID++           ++   +   + L ++DG        I+V+ ATNR   +D A  R
Sbjct:  430 MMRPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSL---LSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 566          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18
Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = 2
Query:   47 GARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNT-GIIVIAATNRADILDSALLR 433
            G R P  G+LL GPPGTGK+ LAKA+A EA   FFS+S S+ V  ++G     V+ LF  A+EN P I+F+DE+DA+           ++   +   +LL +M+G   ++ G++V+ ATN    LDSA+ R
Sbjct:  161 GNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDAL---TGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR 288          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18
Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 2
Query:   23 KPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433
            +P+ FT +    PKG+LL GPPGTGKTL+ K IA ++G  FFSIS S     +VG G   VR LF  A+   P ++F+DEID++           ++   +   + L ++DG        I+V+ ATNR   +D A  R
Sbjct:  423 RPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSL---LSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 557          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: ATAD2_PONAB (ATPase family AAA domain-containing protein 2 OS=Pongo abelii GN=ATAD2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.713e-18
Identity = 54/145 (37.24%), Postives = 76/145 (52.41%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA-----GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            PE F     + P+G L  GPPGTGKTL+A+A+A     G+  V FF   G++ +  +VG    ++R LF +A +  P I+F DEID +           +      ++ LL  MDG +    I+VI ATNR D +D AL R   F
Sbjct:  280 PEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL---APVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRF 421          

HSP 2 Score: 26.5646 bits (57), Expect = 1.713e-18
Identity = 19/67 (28.36%), Postives = 30/67 (44.78%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFT--GSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR+    +PD   +   +K  T   + K  D     L    E   G++ AD  ++  +A + A
Sbjct:  418 PGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLD---TFLEELAENCVGYRGADIKSICAEAALCA 481          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.924e-18
Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 2
Query:   23 KPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433
            +P+ FT +    PKG+LL GPPGTGKTL+ K IA ++G  FFSIS S     +VG G   VR LF  A+ + P ++F+DEID++           ++   +   + L ++DG     +  I+V+ ATNR   +D A  R
Sbjct:  405 RPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSL---LSQRGEGEHESSRRIKTEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARR 539          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: YEJJ_SCHPO (Uncharacterized AAA domain-containing protein C31G5.19 OS=Schizosaccharomyces pombe GN=SPAC31G5.19 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.224e-18
Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQ----TLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            PE F     + P+GVL  GPPGTGKTL+A+A+A         V F+   G++ +  +VG    ++R LF++AK   P I+F DEID +           + ++EQ     ++ LL  MDG E    +I+I ATNR D +D AL R   F
Sbjct:  289 PEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGL-------APVRSSKQEQIHASIVSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRF 430          

HSP 2 Score: 23.483 bits (49), Expect = 2.224e-18
Identity = 17/63 (26.98%), Postives = 29/63 (46.03%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGI 623
            PGRFDR+    +PD   + + I+  T +        +  M   E++ G+  AD   L  +A +
Sbjct:  427 PGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSM-LAEKSKGYGGADLRALCTEAAL 488          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_XENLA (Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.513e-18
Identity = 53/139 (38.13%), Postives = 77/139 (55.40%), Query Frame = 2
Query:   23 KPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433
            +P+ FT +    PKG+LL GPPGTGKTL+ K IA ++G  FFSIS S     +VG G   VR LF  A+ + P ++F+DEID++           ++   +   + L ++DG        I+V+ ATNR   +D A  R
Sbjct:  404 RPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSL---LSQRGEGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 538          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.792e-18
Identity = 55/150 (36.67%), Postives = 78/150 (52.00%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFK--------KAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            P     +G    KG+LL GPPGTGKTL+A+ I     A  P   ++G E +  +VG     +R+LFK        K +E++  I+  DE+D+V               +  +NQLL +MDG +    I+VI  TNR D++DSALLR   F
Sbjct:  263 PSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKI-VNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTG-VGDNVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRF 410          

HSP 2 Score: 30.4166 bits (67), Expect = 3.792e-18
Identity = 20/67 (29.85%), Postives = 32/67 (47.76%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNR--DIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRF+ QV + +PD +G+ +  DI+          ++ V+L      T  F  A+   L + A  FA
Sbjct:  407 PGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFA 473          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
VPS4B_PONAB6.614e-1942.25Vacuolar protein sorting-associated protein 4B OS=... [more]
FIGL1_RAT1.128e-1837.59Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fi... [more]
FIGL1_MOUSE1.128e-1837.59Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 ... [more]
VPS4_YEAST1.473e-1841.22Vacuolar protein sorting-associated protein 4 OS=S... [more]
FIGL1_HUMAN1.473e-1838.13Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 ... [more]
ATAD2_PONAB1.713e-1837.24ATPase family AAA domain-containing protein 2 OS=P... [more]
FIGL1_XENTR1.924e-1838.13Fidgetin-like protein 1 OS=Xenopus tropicalis GN=f... [more]
YEJJ_SCHPO2.224e-1837.58Uncharacterized AAA domain-containing protein C31G... [more]
FIGL1_XENLA2.513e-1838.13Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl... [more]
SEC18_YEAST3.792e-1836.67Vesicular-fusion protein SEC18 OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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