EY665459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.614e-19 Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 17 LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLR 433 +K P FT G R P +G+LL GPPGTGK+ LAKA+A EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ ++ + + L +M G N GI+V+ ATN +LDSA+ R Sbjct: 154 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSENESEAARRIKTEFLVQMRGVGVDNDGILVLGATNIPWVLDSAIRR 290
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.128e-18 Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433 + +P+ FT + PKG+LL GPPGTGKTL+ K IA ++G FFSIS S +VG G VR LF A+ P ++F+DEID++ ++ + + L ++DG I+V+ ATNR +D A R Sbjct: 424 MMRPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSL---LSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 560
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.128e-18 Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433 + +P+ FT + PKG+LL GPPGTGKTL+ K IA ++G FFSIS S +VG G VR LF A+ P ++F+DEID++ ++ + + L ++DG I+V+ ATNR +D A R Sbjct: 430 MMRPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSL---LSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 566
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18 Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = 2 Query: 47 GARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNT-GIIVIAATNRADILDSALLR 433 G R P G+LL GPPGTGK+ LAKA+A EA FFS+S S+ V ++G V+ LF A+EN P I+F+DE+DA+ ++ + +LL +M+G ++ G++V+ ATN LDSA+ R Sbjct: 161 GNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDAL---TGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR 288
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18 Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 23 KPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433 +P+ FT + PKG+LL GPPGTGKTL+ K IA ++G FFSIS S +VG G VR LF A+ P ++F+DEID++ ++ + + L ++DG I+V+ ATNR +D A R Sbjct: 423 RPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSL---LSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 557
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: ATAD2_PONAB (ATPase family AAA domain-containing protein 2 OS=Pongo abelii GN=ATAD2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.713e-18 Identity = 54/145 (37.24%), Postives = 76/145 (52.41%), Query Frame = 2 Query: 26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA-----GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445 PE F + P+G L GPPGTGKTL+A+A+A G+ V FF G++ + +VG ++R LF +A + P I+F DEID + + ++ LL MDG + I+VI ATNR D +D AL R F Sbjct: 280 PEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL---APVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRF 421 HSP 2 Score: 26.5646 bits (57), Expect = 1.713e-18 Identity = 19/67 (28.36%), Postives = 30/67 (44.78%), Query Frame = 3 Query: 435 PGRFDRQVTVDVPDIRGKNRDIKRFT--GSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629 PGRFDR+ +PD + +K T + K D L E G++ AD ++ +A + A Sbjct: 418 PGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLD---TFLEELAENCVGYRGADIKSICAEAALCA 481
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.924e-18 Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 2 Query: 23 KPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433 +P+ FT + PKG+LL GPPGTGKTL+ K IA ++G FFSIS S +VG G VR LF A+ + P ++F+DEID++ ++ + + L ++DG + I+V+ ATNR +D A R Sbjct: 405 RPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSL---LSQRGEGEHESSRRIKTEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARR 539
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: YEJJ_SCHPO (Uncharacterized AAA domain-containing protein C31G5.19 OS=Schizosaccharomyces pombe GN=SPAC31G5.19 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.224e-18 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 2 Query: 26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQ----TLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445 PE F + P+GVL GPPGTGKTL+A+A+A V F+ G++ + +VG ++R LF++AK P I+F DEID + + ++EQ ++ LL MDG E +I+I ATNR D +D AL R F Sbjct: 289 PEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGL-------APVRSSKQEQIHASIVSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRF 430 HSP 2 Score: 23.483 bits (49), Expect = 2.224e-18 Identity = 17/63 (26.98%), Postives = 29/63 (46.03%), Query Frame = 3 Query: 435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGI 623 PGRFDR+ +PD + + I+ T + + M E++ G+ AD L +A + Sbjct: 427 PGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSM-LAEKSKGYGGADLRALCTEAAL 488
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_XENLA (Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.513e-18 Identity = 53/139 (38.13%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 23 KPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG--FEGNTGIIVIAATNRADILDSALLR 433 +P+ FT + PKG+LL GPPGTGKTL+ K IA ++G FFSIS S +VG G VR LF A+ + P ++F+DEID++ ++ + + L ++DG I+V+ ATNR +D A R Sbjct: 404 RPDIFTGLRGP-PKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSL---LSQRGEGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 538
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.792e-18 Identity = 55/150 (36.67%), Postives = 78/150 (52.00%), Query Frame = 2 Query: 26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFK--------KAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445 P +G KG+LL GPPGTGKTL+A+ I A P ++G E + +VG +R+LFK K +E++ I+ DE+D+V + +NQLL +MDG + I+VI TNR D++DSALLR F Sbjct: 263 PSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKI-VNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTG-VGDNVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRF 410 HSP 2 Score: 30.4166 bits (67), Expect = 3.792e-18 Identity = 20/67 (29.85%), Postives = 32/67 (47.76%), Query Frame = 3 Query: 435 PGRFDRQVTVDVPDIRGKNR--DIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629 PGRF+ QV + +PD +G+ + DI+ ++ V+L T F A+ L + A FA Sbjct: 407 PGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFA 473 The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bpback to top |