EY665459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEBR (Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.629e-17 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 20 KKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVIAATNRADILDSALLR 433 ++P+ FT + A PKGVLL GPPGTGKT++ + +A +A FF+IS S +VG G VR LF A+ P ++F+DEID++ ++ + + L ++DG + ++V+ ATNR LD A R Sbjct: 337 QRPDIFTGLRAP-PKGVLLFGPPGTGKTMIGRCVASQAQATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSL---LSARSESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR 472
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF_CAEEL (Vesicle-fusing ATPase OS=Caenorhabditis elegans GN=nsf-1 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.828e-17 Identity = 56/146 (38.36%), Postives = 79/146 (54.11%), Query Frame = 2 Query: 26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN-APC-------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433 PE +G + +G+LL GPPGTGKTL+A+ I A P ++G + ++ +VG S VR LF A+E C I+ DEIDA+ + + +NQLL++MDG E I+VI TNR D++D ALLR Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGS-SSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLR 462 HSP 2 Score: 26.5646 bits (57), Expect = 1.828e-17 Identity = 20/64 (31.25%), Postives = 30/64 (46.88%), Query Frame = 3 Query: 435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNK---KFDANGVSLMGKPEQTPGFQAADFATLKEQA 617 PGR + Q+ V +PD G+ + +K T + K D N V L ++T F A+ L A Sbjct: 463 PGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPN-VDLEDISKRTKNFSGAELEGLVRAA 525
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 17 LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLR 433 +K P FT G R P +G+LL GPPGTGK+ LAKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ ++ + + L +M G N G +V+ ATN +LDSA+ R Sbjct: 147 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL---CGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR 283
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 17 LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLR 433 +K P FT G R P +G+LL GPPGTGK+ LAKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ ++ + + L +M G N G +V+ ATN +LDSA+ R Sbjct: 147 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL---CGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR 283
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 17 LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLR 433 +K P FT G R P +G+LL GPPGTGK+ LAKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ ++ + + L +M G N G +V+ ATN +LDSA+ R Sbjct: 147 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL---CGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR 283
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KTNA1_STRPU (Katanin p60 ATPase-containing subunit OS=Strongylocentrotus purpuratus GN=KATNA1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17 Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 2 Query: 47 GARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVIAATNRADILDSALLR 433 G R P KGVL+VGPPGTGKT+LAKA+A E G FF++S + + G VR LF+ A+ AP +F+DEID++ ++ + ++LL +MDG G + ++V+AATN +D AL R Sbjct: 262 GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSI--CSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR 396
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17 Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 2 Query: 47 GARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVIAATNRADILDSALLR 433 G R P KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ +DE E + ++LL +MDG G + ++V+AATN +D AL R Sbjct: 236 GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR 370
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KATL1_RAT (Katanin p60 ATPase-containing subunit A-like 1 OS=Rattus norvegicus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17 Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 2 Query: 47 GARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVIAATNRADILDSALLR 433 G R P KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ +DE E + ++LL +MDG G + ++V+AATN +D AL R Sbjct: 234 GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR 368
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17 Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 2 Query: 47 GARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVIAATNRADILDSALLR 433 G R P KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ +DE E + ++LL +MDG G + ++V+AATN +D AL R Sbjct: 236 GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR 370
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17 Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 2 Query: 47 GARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVIAATNRADILDSALLR 433 G R P KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ +DE E + ++LL +MDG G + ++V+AATN +D AL R Sbjct: 236 GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR 370 The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bpback to top |