EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KATL1_MOUSE (Katanin p60 ATPase-containing subunit A-like 1 OS=Mus musculus GN=Katnal1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17
Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 2
Query:   47 GARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVIAATNRADILDSALLR 433
            G R P KGVL+VGPPGTGKT+LAKA+A E G  FF++S S     + G     VR LF+ A+  AP  +F+DEID++           +DE E   +  ++LL +MDG  G       +  ++V+AATN    +D AL R
Sbjct:  234 GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR 368          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17
Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 2
Query:   47 GARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVIAATNRADILDSALLR 433
            G R P KGVL+VGPPGTGKT+LAKA+A E G  FF++S S     + G     VR LF+ A+  AP  +F+DEID++           +DE E   +  ++LL +MDG  G       +  ++V+AATN    +D AL R
Sbjct:  236 GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR 370          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: YHI5_SCHPO (Uncharacterized AAA domain-containing protein P22H7.05c OS=Schizosaccharomyces pombe GN=SPBP22H7.05c PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.358e-17
Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT----LNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            PE F  +    P+GVL  GPPGTGKTL+A+ +A         + FF   GS+ +  +VG    ++R LF++A+   P I+F DEID +           + ++EQT    ++ LL  MDG +    ++VI ATNR + LD AL R   F
Sbjct:  395 PEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGL-------APIRSSKQEQTHSSIVSTLLALMDGLDTRGQVVVIGATNRPNDLDPALRRPGRF 536          

HSP 2 Score: 24.2534 bits (51), Expect = 2.358e-17
Identity = 21/67 (31.34%), Postives = 31/67 (46.27%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPD--IRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR+    +P+   R K  +I     S K  ++    L+   E T G+  AD   L  +A + A
Sbjct:  533 PGRFDREFYFPLPNKQARMKILEINSLHFSPKIPES---YLLHLAESTSGYGGADLKALCTEAALNA 596          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: YR476_MIMIV (Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R476 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.374e-17
Identity = 56/150 (37.33%), Postives = 78/150 (52.00%), Query Frame = 2
Query:   29 ERFTAVGARIPKGVLLVGPPGTGKTLLAK---AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            + + A G R  KG++L GPPGTGKT L++    I G  G  F  +SG E    +VG   S +R +FK AK+        +   +V +DEIDA+           N  R+  +NQ L EMDG E    +I I  TNR ++LD A +R+  F
Sbjct:  593 QEYLARGLRPVKGIILHGPPGTGKTSLSRNLGKILGCEGDRFRLMSGPEIFNKWVGGSESNIRAIFKPAKDAWKKHGDKSPVYMVVIDEIDAMLPSRSGSDG--NPVRDSVVNQFLAEMDGLEVFNNLICIGITNRLELLDPATIRSGRF 740          

HSP 2 Score: 25.409 bits (54), Expect = 2.374e-17
Identity = 18/71 (25.35%), Postives = 31/71 (43.66%), Query Frame = 3
Query:  438 GRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFD-----ANGVSLMGKPEQTPGFQAADFATLKEQAGIFACD 635
            GRF   + +D+PD  G+   +K F    KK       ++ V +      T  F  AD   + E A +++ +
Sbjct:  738 GRFGIHIKIDLPDQEGR---VKIFQIHTKKLQELNRLSDDVDISKLAVITEEFSGADIEGMVELASVYSLE 805          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.629e-17
Identity = 58/145 (40.00%), Postives = 86/145 (59.31%), Query Frame = 2
Query:   17 LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTE----MDGFEGNT-GIIVIAATNRADILDSALLR 433
            +K P+ FT  G R P KG+LL GPPGTGK+ LAKA+A E    FFSIS S+ V  ++G     V+ LF+ A+E    ++F+DE+D++           ND+  ++  ++ TE    M+G   ++ GI+V+AATN    LD A+ R
Sbjct:  155 IKFPQMFT--GNRKPWKGILLYGPPGTGKSYLAKAVATEISSTFFSISPSDIVTKWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSL-------CSSRNDQESESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWGLDLAIRR 290          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 4.024e-17
Identity = 53/145 (36.55%), Postives = 76/145 (52.41%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            P   + +G +  KG+LL GPPGTGKTL+A+ I     G     ++G E +  FVG     VRDLF  A+++           ++  DEIDA+               +  +NQLLT++DG E    +++I  TNR D+LD ALLR
Sbjct:  239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTG-VHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLR 382          

HSP 2 Score: 26.5646 bits (57), Expect = 4.024e-17
Identity = 16/67 (23.88%), Postives = 32/67 (47.76%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKK--FDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGR + QV + +PD  G+ + ++  T   K+  F    ++L     +T  +  A+   + + A  +A
Sbjct:  383 PGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYA 449          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.740e-17
Identity = 60/144 (41.67%), Postives = 78/144 (54.17%), Query Frame = 2
Query:   26 PERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVIAATNRADILDSALLR 433
            PE F   G R P KGVL+VGPPGTGKTLLAKA+A E    FF++S S     + G     VR LF+ A+  AP  +F+DEID++              R +   +LL +MDG  G T        ++V+AATN    +D AL R
Sbjct:  233 PEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKA--ELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRR 372          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus GN=Katnal2 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.740e-17
Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII-VIAATNRADILDSALLR 433
            ++ P+ FT + +   KG+LL GPPGTGKTLLAKA+A E    FF+IS S  V  + G     VR LF+ A+ +AP  +F+DE+++V           ++   +   +LL +MDG   +  ++ V+AA+N    LD A+LR
Sbjct:  275 IRYPQLFTGILSPW-KGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR 413          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 4.740e-17
Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGII-VIAATNRADILDSALLR 433
            ++ P+ FT + +   KG+LL GPPGTGKTLLAKA+A E    FF+IS S  V  + G     VR LF+ A+ +AP  +F+DE+++V           ++   +   +LL +MDG   +  ++ V+AA+N    LD A+LR
Sbjct:  274 IRYPQLFTGILSPW-KGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR 412          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.190e-17
Identity = 59/143 (41.26%), Postives = 78/143 (54.55%), Query Frame = 2
Query:   26 PERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG------IIVIAATNRADILDSALLR 433
            PE F   G R P KGVL+VGPPGTGKTLLAKA+A E    FF++S S     + G     VR LF+ A+  AP  +F+DEID++              R +   +LL +MDG  G +       ++V+AATN    +D AL R
Sbjct:  227 PEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKA--ELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRR 365          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
KATL1_MOUSE2.128e-1741.43Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KATL1_HUMAN2.128e-1741.43Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
YHI5_SCHPO2.358e-1736.91Uncharacterized AAA domain-containing protein P22H... [more]
YR476_MIMIV2.374e-1737.33Putative AAA family ATPase R476 OS=Acanthamoeba po... [more]
VPS4_DICDI3.629e-1740.00Vacuolar protein sorting-associated protein 4 OS=D... [more]
NSF_ARATH4.024e-1736.55Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=N... [more]
KTNA1_CHICK4.740e-1741.67Katanin p60 ATPase-containing subunit A1 OS=Gallus... [more]
KATL2_MOUSE4.740e-1738.57Katanin p60 ATPase-containing subunit A-like 2 OS=... [more]
KATL2_HUMAN4.740e-1738.57Katanin p60 ATPase-containing subunit A-like 2 OS=... [more]
KTNA1_DANRE6.190e-1741.26Katanin p60 ATPase-containing subunit A1 OS=Danio ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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