EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.522e-16
Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG------------IIVIAATNRADILDSALLRAWT 442
            +P+ F   G R P +G+LL GPPGTGKT++AKA+A E+   FFS+S S  +  ++G     VR LF  AK+ +P I+F+DEID++           N+   +   +LL +       T             ++V+ ATN    +D A  R ++
Sbjct:  493 RPDLFK--GLREPVRGMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSM---LTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARRRFS 640          

HSP 2 Score: 26.5646 bits (57), Expect = 2.522e-16
Identity = 15/61 (24.59%), Postives = 27/61 (44.26%), Query Frame = 3
Query:  441 RFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGI 623
            RF R++ + +PD   +   +KR     K      +      E T GF  +D  +L ++A +
Sbjct:  638 RFSRKLYIPLPDYETRLYHLKRLMAKQKN-SLQDLDYELITEMTEGFSGSDLTSLAKEAAM 697          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.274e-16
Identity = 54/146 (36.99%), Postives = 74/146 (50.68%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK--------ENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            P     +G    KG+LL GPPGTGKTL+A+ I     A  P   ++G E +  +VG     VR LF  A+        E+   I+  DE+DA+               +Q +NQLL +MDG +    I+VI  TNR D++D ALLR
Sbjct:  293 PGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKI-VNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTG-VGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLR 436          

HSP 2 Score: 26.9498 bits (58), Expect = 3.274e-16
Identity = 18/67 (26.87%), Postives = 30/67 (44.78%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTG--SNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGR +  + + +PD  G+ + +K  T   ++     N V +      T  F  A+ A L + A  FA
Sbjct:  437 PGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFA 503          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.938e-16
Identity = 58/146 (39.73%), Postives = 79/146 (54.11%), Query Frame = 2
Query:   26 PERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG---------IIVIAATNRADILDSALLR 433
            PE F   G R P KGVL+ GPPGTGKTLLAKA+A E G  FF++S +     + G     VR LF  A+  AP  +F+DEID++           +  R +  ++LL ++DG   NT          ++V+AATN    +D AL R
Sbjct:  262 PEYFQ--GIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRVK--SELLVQVDGV-SNTATNEDGSRKIVMVLAATNFPWDIDEALRR 402          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_OLTVI (Cell division protease ftsH homolog OS=Oltmannsiellopsis viridis GN=ftsH PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.167e-15
Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVG-VGASRVRDLFKKAKENAPCIVFVDEIDAV 274
            P  +      IPKG+LLVGPPGTGKTLL +AIAGEA VP    S S   +      GA ++ DLFK+A+E +PCIVF+DEID +
Sbjct: 1323 PSNWLTFEKMIPKGILLVGPPGTGKTLLVQAIAGEANVPVLVQSLSLISQPGESDSGAEKLTDLFKRARELSPCIVFIDEIDTL 1406          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF1_DROME (Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15
Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            PE    +G +  KG+LL GPPGTGKTL+A+ I     A  P   ++G + ++ +VG   + VR LF +A+E            I+  DEIDA+           +   +  +NQLLT++DG +    I+VI  TNR D++D ALLR
Sbjct:  242 PELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGN-SGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLR 385          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 56/158 (35.44%), Postives = 82/158 (51.90%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLL--------------------TEMDGFEGNTGIIVIAATNRADILDSALLR 433
            +P+ F   G R P +G+LL GPPGTGKT+LA+A+A E+   FFSIS S     ++G     VR LF  AK+ +P I+FVDEID++           N+   +  N+ L                    ++ +G E +T ++V+AATN    +D A  R
Sbjct:  627 RPDLFR--GLREPVRGMLLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSI--MGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARR 780          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_CHLVU (Cell division protease ftsH homolog OS=Chlorella vulgaris GN=ftsH PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.436e-15
Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE 364
            V FL+   R       +P G+LL GPPGTGKTLL +A+AGEA VP   +SGS  +E      A +++ +F++A++ APCIVF+DEID +           + +R Q L   +    GFE
Sbjct:  990 VLFLRNSGRNFTHSETLPHGILLTGPPGTGKTLLVQALAGEAQVPVIVLSGSSLMEPGES-AAFKLQLVFQEARQLAPCIVFIDEIDTL-----------SSKRSQLLQNPMANDPGFE 1096          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF2_DROME (Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.794e-15
Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            PE    +G +  KG+LL GPPGTGKTL+A+ I     A  P   ++G + ++ +VG   + +R LF +A+E            I+  DEIDA+           +   +  +NQLL ++DG E    I+VI  TNR D++D ALLR
Sbjct:  247 PELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGN-SGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLR 390          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF_RAT (Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14
Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            PE    +G +  KG+LL GPPG GKTLLA+ I     A E  V    ++G E +  +VG   + +R LF  A+E        +   I+  DEIDA+               +  +NQLL+++DG E    I+VI  TNR D++D ALLR
Sbjct:  242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLR 385          

HSP 2 Score: 20.4014 bits (41), Expect = 1.283e-14
Identity = 6/18 (33.33%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGK 488
            PGR + ++ + +PD +G+
Sbjct:  386 PGRLEVKMEIGLPDEKGR 403          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14
Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            PE    +G +  KG+LL GPPG GKTLLA+ I     A E  V    ++G E +  +VG   + +R LF  A+E        +   I+  DEIDA+               +  +NQLL+++DG E    I+VI  TNR D++D ALLR
Sbjct:  242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLR 385          

HSP 2 Score: 20.4014 bits (41), Expect = 1.283e-14
Identity = 6/18 (33.33%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGK 488
            PGR + ++ + +PD +G+
Sbjct:  386 PGRLEVKMEIGLPDEKGR 403          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
TBP6_YEAST2.522e-1633.33Probable 26S protease subunit YTA6 OS=Saccharomyce... [more]
SEC18_SCHPO3.274e-1636.99Vesicular-fusion protein sec18 OS=Schizosaccharomy... [more]
KTNA1_ARATH8.938e-1639.73Katanin p60 ATPase-containing subunit OS=Arabidops... [more]
FTSH_OLTVI1.167e-1553.57Cell division protease ftsH homolog OS=Oltmannsiel... [more]
NSF1_DROME1.991e-1536.99Vesicle-fusing ATPase 1 OS=Drosophila melanogaster... [more]
SAP1_YEAST3.397e-1535.44Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 P... [more]
FTSH_CHLVU4.436e-1540.34Cell division protease ftsH homolog OS=Chlorella v... [more]
NSF2_DROME5.794e-1536.30Vesicle-fusing ATPase 2 OS=Drosophila melanogaster... [more]
NSF_RAT1.283e-1436.91Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf ... [more]
NSF_PONAB1.283e-1436.91Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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