EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF_MOUSE (Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14
Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            PE    +G +  KG+LL GPPG GKTLLA+ I     A E  V    ++G E +  +VG   + +R LF  A+E        +   I+  DEIDA+               +  +NQLL+++DG E    I+VI  TNR D++D ALLR
Sbjct:  242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLR 385          

HSP 2 Score: 20.4014 bits (41), Expect = 1.283e-14
Identity = 6/18 (33.33%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGK 488
            PGR + ++ + +PD +G+
Sbjct:  386 PGRLEVKMEIGLPDEKGR 403          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF_HUMAN (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14
Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            PE    +G +  KG+LL GPPG GKTLLA+ I     A E  V    ++G E +  +VG   + +R LF  A+E        +   I+  DEIDA+               +  +NQLL+++DG E    I+VI  TNR D++D ALLR
Sbjct:  242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLR 385          

HSP 2 Score: 20.4014 bits (41), Expect = 1.283e-14
Identity = 6/18 (33.33%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGK 488
            PGR + ++ + +PD +G+
Sbjct:  386 PGRLEVKMEIGLPDEKGR 403          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF_CRIGR (Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14
Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   26 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            PE    +G +  KG+LL GPPG GKTLLA+ I     A E  V    ++G E +  +VG   + +R LF  A+E        +   I+  DEIDA+               +  +NQLL+++DG E    I+VI  TNR D++D ALLR
Sbjct:  242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLR 385          

HSP 2 Score: 20.4014 bits (41), Expect = 1.283e-14
Identity = 6/18 (33.33%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGK 488
            PGR + ++ + +PD +G+
Sbjct:  386 PGRLEVKMEIGLPDEKGR 403          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.686e-14
Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 2
Query:   59 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN-TGIIVIAATNRADILDSALLRAWT 442
            P+G+LL GPPG GKTLLAKA+A  AG  F ++  S   + + G        +F  A++  P I+F+DEID+            ++       Q +T  DGF  +   IIV+ ATNR   +D+A+LR  T
Sbjct:  117 PRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDS---FLRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILRRMT 242          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: NSF_DICDI (Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.814e-14
Identity = 49/139 (35.25%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   44 VGARIPKGVLLVGPPGTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASRVRDLFKKAK--------ENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433
            +G    KG+LL GPPGTGKTL+A+ I     G     +SG   +  +VG     +R LF+ A+        ++   I+  DE+DA+           +   +  +NQLL  +DG E    I+VI  TNR D++D ALLR
Sbjct:  252 LGVNHVKGMLLYGPPGTGKTLIARQIGKMLNGREPKVVSGPSILNKYVGQSEENIRMLFRDAEIEQKAKGDDSGLHIIIFDELDAICKSRGSRQGD-SGVGDSVVNQLLAMIDGVESLNNILVIGMTNRKDMIDEALLR 389          

HSP 2 Score: 25.7942 bits (55), Expect = 2.814e-14
Identity = 16/67 (23.88%), Postives = 29/67 (43.28%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDA--NGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGR +  V + +PD  G+ +  K  T   +  +A    V+L      T  +  A+   + + A  +A
Sbjct:  390 PGRLEVHVEISLPDEHGREQIFKIHTAKMRDQNALDKDVNLANYAHTTRNYSGAEIEGVVKSAASYA 456          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: YCF46_GRATL (Uncharacterized AAA domain-containing protein ycf46 OS=Gracilaria tenuistipitata var. liui GN=ycf46 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.905e-14
Identity = 46/133 (34.59%), Postives = 71/133 (53.38%), Query Frame = 2
Query:   47 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            G  +PKG+LL+G  GTGK+L+AKAI+G+  +P   +   +     VG    R+R + K A++++PCI+++DEID              + R   L+ +LT +   E    + VIA  N+   L S LLR   F
Sbjct:  256 GLTVPKGILLIGIQGTGKSLIAKAISGQWNLPLLKLDMGKIFASLVGQSEERMRHMIKTAEQSSPCILWIDEIDKCFTRLNNYTDSGTNGR--VLSTMLTWLS--EKKKPVFVIATANQVLSLPSELLRKGRF 384          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.905e-14
Identity = 48/127 (37.80%), Postives = 67/127 (52.76%), Query Frame = 2
Query:   59 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEG--NTGIIVIAATNRADILDSALLR 433
            PKGVLL GPPG GKTL+AKA A EAG  F ++  S   + + G        +F  A +  P I+F+DEID+            ++       Q ++  DG +   N  +I++ ATNR   LDSA+LR
Sbjct:  130 PKGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLRNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR 253          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14
Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 274
            +P+ F   G R P +G+LL GPPGTGKT+LA+A+A E+   FFSIS S     F+G     VR LF  AK+ +P I+FVDEID++
Sbjct:  481 RPDLFQ--GLREPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSL 563          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14
Identity = 54/146 (36.99%), Postives = 74/146 (50.68%), Query Frame = 2
Query:   23 KPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLL-------TEMDGFEGNT-GIIVIAATNRADILDSALLR 433
            +PE F   G R P +G+LL GPPGTGKT+LA+A+A EA   FFSIS S     ++G     VR LF+ AK     ++FVDEID++              R      L+          D   G++  ++V+AATN    +D A  R
Sbjct:  401 RPELFQ--GLREPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARNDSGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR 544          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: YJNA_SCHPO (Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe GN=SPCC24B10.10c PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13
Identity = 49/142 (34.51%), Postives = 74/142 (52.11%), Query Frame = 2
Query:   17 LKKPERFTAVGARI--PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG-FEGNTGIIVIAATNRADILDSALLR 433
            LK PE F   G  +  PKG+LL GPPG GKT+LAKA+A ++   F ++S     + + G     V  LF  A++  P I+F+DEID             ++   Q   + ++  DG   G + ++V+ ATNR   +D A+ R
Sbjct:  109 LKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDT---FLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR 247          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
NSF_MOUSE1.283e-1436.91Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 ... [more]
NSF_HUMAN1.283e-1436.91Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 ... [more]
NSF_CRIGR1.283e-1436.91Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF... [more]
MSP1_CAEEL1.686e-1437.21Mitochondrial sorting homolog OS=Caenorhabditis el... [more]
NSF_DICDI2.814e-1435.25Vesicle-fusing ATPase OS=Dictyostelium discoideum ... [more]
YCF46_GRATL4.905e-1434.59Uncharacterized AAA domain-containing protein ycf4... [more]
ATD1B_DANRE4.905e-1437.80ATPase family AAA domain-containing protein 1-B OS... [more]
YKX4_SCHPO8.366e-1450.59Uncharacterized AAA domain-containing protein C328... [more]
SUR2_SCHPO8.366e-1436.99Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 ... [more]
YJNA_SCHPO1.093e-1334.51Uncharacterized AAA domain-containing protein C24B... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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