EY665459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13 Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 59 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVIAATNRADILDSALLR 433 PKGVLL GPPG GKTL+AKA A +G F ++ S + + G +F A + PCI+F+DEID+ ++ Q ++ DG + N+ ++V+ ATNR +D+A+LR Sbjct: 129 PKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDS---FLRNRSSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILR 252
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: ATAD1_RAT (ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13 Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 59 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVIAATNRADILDSALLR 433 PKGVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + P I+F+DEID+ ++ Q ++ DG + + +IV+ ATNR LDSA++R Sbjct: 126 PKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR 249
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: ATAD1_MOUSE (ATPase family AAA domain-containing protein 1 OS=Mus musculus GN=Atad1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13 Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 59 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVIAATNRADILDSALLR 433 PKGVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + P I+F+DEID+ ++ Q ++ DG + + +IV+ ATNR LDSA++R Sbjct: 126 PKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR 249
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13 Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 59 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVIAATNRADILDSALLR 433 PKGVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + P I+F+DEID+ ++ Q ++ DG + + +IV+ ATNR LDSA++R Sbjct: 126 PKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR 249
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: KATL2_XENLA (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus laevis GN=katnal2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 2 Query: 17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 274 ++ P+ FT + + KG+LL GPPGTGKTLLAKA+A E FF+IS S V + G VR LF+ A+ +AP +F+DE+++V Sbjct: 278 IRYPQLFTGILSPW-KGLLLYGPPGTGKTLLAKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESV 362
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: Y4KL_RHISN (Uncharacterized AAA family ATPase y4kL OS=Rhizobium sp. (strain NGR234) GN=NGR_a02840 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.591e-12 Identity = 43/142 (30.28%), Postives = 73/142 (51.41%), Query Frame = 2 Query: 8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433 V+ ++ + G ++ +L GPPG GKTL A+ A E G+P F + + ++G A+ +R F+ A++ PC++F DE DA+ ++E + +N LL +D + +IAATN LD+A+ R Sbjct: 101 VKEFRRADEIRQHGLKVRSKMLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYLGETATNIRKTFEFARKQ-PCVLFFDEFDAL--ARTRDDSGEHNELRRVVNSLLLFIDNMQPKG--FLIAATNLDRSLDAAIWR 237
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: YCF46_GUITH (Uncharacterized AAA domain-containing protein ycf46 OS=Guillardia theta GN=ycf46 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.830e-12 Identity = 47/144 (32.64%), Postives = 69/144 (47.92%), Query Frame = 2 Query: 14 FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445 F K+ E + G IPKG+LLVG GTGK+L AK+IA E +P + +G +RVR + + A+ +PCI+++DEID +R +T + E + + V+A N D L LLR F Sbjct: 263 FSKRAEEY---GLPIPKGLLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNNDSGTTKR--VFGTFITWLS--EKKSPVFVVATANNIDSLPPELLRKGRF 399
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGN_DANRE (Fidgetin OS=Danio rerio GN=fign PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.023e-11 Identity = 40/139 (28.78%), Postives = 75/139 (53.96%), Query Frame = 2 Query: 23 KPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF--EGNTGIIVIAATNRADILDSALLR 433 +P+ F+ + A +P+ +LL GP GTG+TLL + +A + G F +SGS V ++G G V+ F A+ P +VF+ ++D + N + ++LL ++DG ++V+ +T++ + +D +L R Sbjct: 486 RPDMFSGL-ATLPRSILLFGPQGTGRTLLGRCMASQLGAAFLLLSGSALVTKWLGEGEKIVQASFLIARCRQPSVVFISDVDLLLSSQLSEESPVN----RIKSELLLQLDGVLSSPEEHVLVVCSTSKPEEIDESLRR 619
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGN_MOUSE (Fidgetin OS=Mus musculus GN=Fign PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.278e-11 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 56 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID-AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433 +P+ +LL GP GTGKTLL + IA + G FF I+GS V ++G + F A+ P ++FV +ID + + R + L QL T + E I+VI AT++ + +D +L R Sbjct: 518 LPRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWIGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVSEEHSPVSRMRTEFLMQLDTVLTSAEDQ--IVVICATSKPEEIDESLRR 642
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FIGN_HUMAN (Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 56 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID-AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 433 +P+ +LL GP GTGKTLL + IA + G FF I+GS V ++G + F A+ P ++FV +ID + + R + L QL T + E I+VI AT++ + +D +L R Sbjct: 518 LPRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWLGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVNEEHSPVSRMRTEFLMQLDTVLTSAEDQ--IVVICATSKPEEIDESLRR 642 The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bpback to top |