EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.386e-47
Identity = 94/191 (49.21%), Postives = 141/191 (73.82%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 573
            AVA+ T  +FI+++GSELV  +IGEGSR+VR+LF +A +  P+IIF+DEID++ + R +S + +GD+EVQRTM++LL+++DGF+    I+++ ATNR D+LD A+LRPGR DR IE PNPN ++R  IL+IH+  MN+   +D   +A      SGA+L ++ TEAGMFA+R+ R  V ++DF+ A  K++
Sbjct:  205 AVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKT-SGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLV 394          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 4.889e-46
Identity = 94/190 (49.47%), Postives = 130/190 (68.42%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 570
            AVA      F++V  S +V  YIGE +R++RE+F  A+EH P +IFMDEID+IG  R   G+ + D E+QRT++ELLNQ+DGF+   + K++MATNR D LD ALLRPGR+DRKIE P PNE  R++ILKIH  +++    ID + + +  +G +GA+L+ V TEAG  A++E R +V Q D   A  KV
Sbjct:  185 AVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKV 373          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 7.060e-45
Identity = 93/196 (47.45%), Postives = 133/196 (67.86%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETK 588
            AVA  +  TFI+V  SE    ++GEG+R+VRE+F +AR  APSI+F+DEID+IG+ R++ G+ +G+ E+QRT+++LL ++DGF+  + +K++ ATNR+DILD ALLRPGR DR IE P PN E R +I +I+ ++M     I    +A    G SGAE+K VCTEAG  A+R  R +V   D   A+ K+  K  K
Sbjct:  187 AVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGT-SGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNK 381          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.060e-45
Identity = 91/172 (52.91%), Postives = 128/172 (74.42%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 516
            A A  T  TF++++G +LV ++IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S    GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R  I++IHSR+MN+   ++ +++A     +     K    EAGM ALR
Sbjct:  223 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALR 393          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4)

HSP 1 Score: 178.718 bits (452), Expect = 3.504e-44
Identity = 93/197 (47.21%), Postives = 128/197 (64.97%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKK 591
            AVA      FI    S +V  YIGE +R++RE+F  A+EH P IIFMDE+D+IG  R   G+ + D E+QRT++ELL Q+DGF+   + K++MATNR D LD ALLRPGR+DRK+E P PNE  RL+I KIH+ ++      D +   +  +G +GA+++   TEAG FA+R+ R H+  +D   AV KV   E KK
Sbjct:  234 AVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGT-SADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKV--AEVKK 427          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.576e-44
Identity = 92/196 (46.94%), Postives = 134/196 (68.37%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETK 588
            AVA  +   FI V  SE    ++GEG+R+VRELF MA+  APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF+  + +K++ ATNRIDILD ALLRPGR DR IE P P+ + R +I  I+ ++M +   I+L+ +++   G SGA++K VC EA   A+R+ R  VT  D   A+ K+  K  K
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINVKRNK 381          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.332e-43
Identity = 94/203 (46.31%), Postives = 136/203 (67.00%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAK 609
            AVA  +   FI V  SE    ++GEG+R+VRELF MA+  APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF   + +K++ ATNRIDILD ALLRPGR DR IE P P+   R +I  I+ ++M +   I+L+ +++   G SGA++K VC EA   A+R+ R  VT +D   A+ K+  K  + NM   K
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITKINVK--RNNMESMK 386          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.739e-43
Identity = 94/203 (46.31%), Postives = 136/203 (67.00%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAK 609
            AVA  +   FI V  SE    ++GEG+R+VRELF MA+  APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF   + +K++ ATNRIDILD ALLRPGR DR IE P P+   R +I  I+ ++M +   I+L+ +++   G SGA++K VC EA   A+R+ R  VT +D   A+ K+  K  + NM   K
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVK--RNNMESMK 386          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.739e-43
Identity = 94/203 (46.31%), Postives = 136/203 (67.00%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAK 609
            AVA  +   FI V  SE    ++GEG+R+VRELF MA+  APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF   + +K++ ATNRIDILD ALLRPGR DR IE P P+   R +I  I+ ++M +   I+L+ +++   G SGA++K VC EA   A+R+ R  VT +D   A+ K+  K  + NM   K
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVK--RNNMESMK 386          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.739e-43
Identity = 94/203 (46.31%), Postives = 136/203 (67.00%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAK 609
            AVA  +   FI V  SE    ++GEG+R+VRELF MA+  APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF   + +K++ ATNRIDILD ALLRPGR DR IE P P+   R +I  I+ ++M +   I+L+ +++   G SGA++K VC EA   A+R+ R  VT +D   A+ K+  K  + NM   K
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVK--RNNMESMK 386          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
PSMR1_HALSA3.386e-4749.21Proteasome-activating nucleotidase 1 OS=Halobacter... [more]
PRS10_SCHPO4.889e-4649.47Probable 26S protease subunit rpt4 OS=Schizosaccha... [more]
PSMR_SULTO7.060e-4547.45Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PR6AA_XENLA7.060e-4552.9126S protease regulatory subunit 6A-A OS=Xenopus la... [more]
PRS10_YEAST3.504e-4447.2126S protease subunit RPT4 OS=Saccharomyces cerevis... [more]
PSMR_SULSO4.576e-4446.94Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PSMR_SULIN1.332e-4346.31Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIY1.739e-4346.31Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIM1.739e-4346.31Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIL1.739e-4346.31Proteasome-activating nucleotidase OS=Sulfolobus i... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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