EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.739e-43
Identity = 94/203 (46.31%), Postives = 136/203 (67.00%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAK 609
            AVA  +   FI V  SE    ++GEG+R+VRELF MA+  APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF   + +K++ ATNRIDILD ALLRPGR DR IE P P+   R +I  I+ ++M +   I+L+ +++   G SGA++K VC EA   A+R+ R  VT +D   A+ K+  K  + NM   K
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVK--RNNMESMK 386          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.739e-43
Identity = 94/203 (46.31%), Postives = 136/203 (67.00%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAK 609
            AVA  +   FI V  SE    ++GEG+R+VRELF MA+  APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF   + +K++ ATNRIDILD ALLRPGR DR IE P P+   R +I  I+ ++M +   I+L+ +++   G SGA++K VC EA   A+R+ R  VT +D   A+ K+  K  + NM   K
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVK--RNNMESMK 386          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.608e-43
Identity = 98/196 (50.00%), Postives = 133/196 (67.86%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP--NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            AVA+ T   FIRV+GSE V  Y+GEG RMVR++F +ARE+APSIIF+DE+DSI + R ++ +G+ D EVQR ++ELL Q+DGF+ S  +KV+MATNR D LD ALLRPGR+DRKIEFP      E RL I    + +M+L    DL  +  + +  SGA + A+  EAG+ A+R+ R  + Q D E A A  +K +
Sbjct:  225 AVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS-DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRL-IFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVKTD 418          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.631e-43
Identity = 99/195 (50.77%), Postives = 136/195 (69.74%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN--PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH-VTQEDFEMAVAKVMK 576
            AVA+ T  +FIRV+GSE V  Y+GEG RMVR++F MARE++P+IIF+DEID+I + R ++ +G  D EVQR +LELLNQ+DGFE S+ +KV+MATNR D LD ALLRPGR+DRKIEFP+     E RL I    + +M+L   +DL  +  +    SGA + A+  EAG+ A+R+ R + + + D E A A  +K
Sbjct:  219 AVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRL-IFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRSDLEDAYAAQVK 411          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.923e-42
Identity = 94/204 (46.08%), Postives = 135/204 (66.18%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN-PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAK 609
            AVA+ T   FIRV GSE V  Y+GEG RMVR++F MARE+AP+IIF+DEID+I + R ++ +G  D EVQR ++ELL Q+DGF+    +KV+MATNR D LD ALLRPGR+DRKIEFP+  +   R  + +  + +M L   +DL     + + +SGA++ A+  +AG+ A+R+ R  + Q D E A A+ +K    +  +  K
Sbjct:  187 AVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFYK 389          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.378e-40
Identity = 85/202 (42.08%), Postives = 131/202 (64.85%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLA 606
            A+A      FI VSGS+ V +++G G+  VR+LF  A++HAP IIF+DEID++G AR     G G  E ++T+ +LL ++DGF+ S+ I V+ ATNR DILD ALLRPGR DR+I  P P+   R +ILK+H+R   L + +DL+ +A    G +GA+L+ +  EA + A R+ +  +T E+ E A+ ++     +K M+++
Sbjct:  207 AIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITMGLERKGMTIS 408          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.873e-38
Identity = 89/215 (41.40%), Postives = 135/215 (62.79%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE---------------RRIHVTQEDFEMAVAKVMKKETKKNM 597
            AVA+ +   FI V G EL+  ++GE  + VRE+F  AR+ AP +IF DEIDS+   R     G GDS V +R + +LL +LDG E    + V+ ATNR D++D ALLRPGR++R I  P P++++R++I KIH R   L   ++++++AEK  G SGA+++AVC EAGM A+RE               +++ +T++ FE A+ KV    TK+++
Sbjct:  508 AVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRR----GGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTKEDV 718          

HSP 2 Score: 150.599 bits (379), Expect = 1.022e-35
Identity = 89/207 (43.00%), Postives = 125/207 (60.39%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE-----------------RRIHVTQEDFEMAVAKV 570
            AVA+     FI +SG E++  Y GE  + +RE+F  A+E+APSIIF+DEIDSI   R E     G+ E +R + +LL  +DG EA   + V+ ATNR D +D AL RPGR DR+IE   P++E R +IL+IH+R+M L   +DL+++AE  NG  GA+L+A+C EA M ALR                    + VT+EDF  A+  +
Sbjct:  235 AVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEV---TGEVE-RRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKNI 437          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.418e-37
Identity = 78/191 (40.84%), Postives = 122/191 (63.87%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 573
            A+A      F  +SGSE V +++G G+  VR+LF  A+E AP I+F+DEID++G  R   G G G+ E ++T+ +LL ++DGF     + V+ ATNRID+LD ALLRPGR DR+I    PN   RL ILK+HS++  + + + L+ IA +  G SGA+L  +  EA +  +R  ++ +T ++ E ++ K++
Sbjct:  223 AIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQR-GVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKII 412          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.418e-37
Identity = 78/203 (38.42%), Postives = 126/203 (62.07%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAK 609
            AVA      F  +SGSE V +++G G+  VR+LF  A+ +AP I+F+DEID++G  R  +G G G+ E ++T+ +LL ++DGFE +  I ++ ATNR D+LD AL+RPGR DR++    P+   R +IL +H+R   L + +DL KIA +  G +GA+L  +  EA + A R     ++ ++   A+ +V+    KKN  +++
Sbjct:  213 AVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQR-GAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEKKNRVMSE 414          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.207e-36
Identity = 76/191 (39.79%), Postives = 124/191 (64.92%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 573
            A+A      F  +SGSE V +++G G+  VR+LF  A+E++P I+F+DEID++G  R  +G G G+ E ++T+ +LL ++DGFE +  I ++ ATNR+D+LD ALLRPGR DR++    P+ + RL+IL +H+R   L   I L+ IA++  G SGA+L  +  EA +   R R+  +T  + + ++ +V+
Sbjct:  225 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRVI 414          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
PSMR_SULIK1.739e-4346.31Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIA1.739e-4346.31Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PRS6B_YEAST6.608e-4350.0026S protease regulatory subunit 6B homolog OS=Sacc... [more]
PRS6B_ASPNG8.631e-4350.7726S protease regulatory subunit 6B homolog OS=Aspe... [more]
PRS6B_SCHPO1.923e-4246.0826S protease regulatory subunit 6B homolog OS=Schi... [more]
FTSH_AQUAE1.378e-4042.08Cell division protease ftsH homolog OS=Aquifex aeo... [more]
Y1297_ARCFU2.873e-3841.40Cell division cycle protein 48 homolog AF_1297 OS=... [more]
FTSH_CYACA5.418e-3740.84Cell division protease ftsH homolog OS=Cyanidium c... [more]
FTSH4_SYNY35.418e-3738.42Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FTSH_GUITH1.207e-3639.79Cell division protease ftsH homolog OS=Guillardia ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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