EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: NSF1_DROME (Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.213e-20
Identity = 66/172 (38.37%), Postives = 97/172 (56.40%), Query Frame = 1
Query:   37 VSGSELVPIYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSARMESGSGNGDSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM----NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 513
            V+G +++  Y+GE    VR LF  A E            II  DEID+I   R   GS  G+S V  T++ +LL ++DG +  N I V+  TNR D++D+ALLRPGR++ ++E   PNE+ R+ IL IH++RM     +   +D K+IA      SGAEL+ +   A   A+
Sbjct:  285 VNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQR---GSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAM 453          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.584e-20
Identity = 71/207 (34.30%), Postives = 117/207 (56.52%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK-IHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAKL 612
            AVA  +  TF  +S + L   Y+GEG ++VR LF +ARE  PSIIF+DE+DS+   R E   G  D+  +R   E L + DG +++  +++ V+ ATNR   LD+A+LR  R  +++    PNEE+RL +LK +  ++ + +   +L ++A   +G SG++L A+  +A +  +RE                 +K E  KNMS +++
Sbjct:  391 AVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLRERRE---GEHDAS-RRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARLTDGYSGSDLTALAKDAALGPIRE-----------------LKPEQVKNMSASEM 574          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.584e-20
Identity = 62/184 (33.70%), Postives = 100/184 (54.35%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF----EASNKIKVLMATNRIDILDQALLRPGRIDRKIEF-PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGA-SGAELKAVCTEAGMFALRERRIHV 534
            A+A      F  V G EL+ +YIGE    VR +F  AR+  P ++F DE+DS+   R   G   G   + R + +LL +LDG     + S  + V+ ATNR D+LD ALLRPGR D+ +    +   + +L IL+  +R+  L   + L  +A+++    +GA+  A+C++A + A+  +   V
Sbjct: 1046 AIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGG--VMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAVTRQAASV 1227          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.069e-20
Identity = 65/176 (36.93%), Postives = 105/176 (59.66%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA--SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK-IHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            AVA  +  TF  +S + L   Y+GEG ++VR LF +ARE  PSIIF+DE+DS+   R E   G  D+  +R   E L + DG ++   +++ V+ ATNR   LD A+LR  R  +++    PNEE+RL +LK + S++ N +   +L +++    G SG+++ A+  +A +  +RE
Sbjct:  381 AVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERRE---GEHDAS-RRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPIRE 550          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.069e-20
Identity = 65/176 (36.93%), Postives = 105/176 (59.66%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA--SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK-IHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            AVA  +  TF  +S + L   Y+GEG ++VR LF +ARE  PSIIF+DE+DS+   R E   G  D+  +R   E L + DG ++   +++ V+ ATNR   LD A+LR  R  +++    PNEE+RL +LK + S++ N +   +L +++    G SG+++ A+  +A +  +RE
Sbjct:  378 AVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERRE---GEHDAS-RRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSGSDITALAKDAALGPIRE 547          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.069e-20
Identity = 64/171 (37.43%), Postives = 95/171 (55.56%), Query Frame = 1
Query:   37 VSGSELVPIYIGEGSRMVRELFVMAR--------EHAPSIIFMDEIDSIGSARMESGSGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMN----LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 510
            V+G E++  Y+G+    VR+LF  A         E    II  DE+D+I   R   GS  GD+ V  + + +LL ++DG +  N I V+  TNR D++D+ALLRPGR++  +E   P+E  RL ILKIH+ RM     L   +D++++A      SGAE+  +   A  FA
Sbjct:  336 VNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR---GSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFA 503          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGL1_XENLA (Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.069e-20
Identity = 72/225 (32.00%), Postives = 121/225 (53.78%), Query Frame = 1
Query:    4 VAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM--ATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDI-LKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI----HVTQE--------DFEMAVAKVMKKETKKNMSLAKLWE*SFPC 633
            +A  +  TF  +S S L   ++GEG +MVR LF +AR H P++IF+DEIDS+ S R   G G  +S  +R   E L QLDG   S++ ++L+  ATNR   +D+A  R  R+ +++  P P   +R  I + + S+    +   +++ I  + +G SGA++  +C EA +  +R  ++     +T E        DF+ A   V    ++K++ L + W  +F C
Sbjct:  435 IACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQR---GEGEHESS-RRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMSKEHCSLTEQEVEAIVLQADGFSGADMTQLCREAALGPIRSIQLMDISTITAEQVRPIAYIDFQSAFLVVRPSVSQKDLELYENWNKTFGC 653          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5)

HSP 1 Score: 99.3673 bits (246), Expect = 2.702e-20
Identity = 66/221 (29.86%), Postives = 116/221 (52.49%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA---SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR-LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH------------VTQEDFEMAVAKVMKKETKKNMSLAKLW 615
            AVA     TF  +S + L   Y+G+G ++VR LF +ARE  PSIIF+DE+DS+ S R    S N     +R   E L Q DG  A   +++I V+ ATNR   LD+A LR  R  +++    P+ ++R L + ++  ++ + +   DL  +A+   G SG++L A+  +A +  +RE  +             + + DF  ++ ++ +    ++++  + W
Sbjct:  555 AVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSIIFIDEVDSVLSER----SSNEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALR--RFPKRVYVTLPDRDTRELLLRRLLQKQGSPLSDADLAHLAQLTEGYSGSDLTALARDAALEPIRELNVEEVKNMDPTKLRSIRESDFHNSLKRIRRSVAPQSLAAYEKW 769          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.702e-20
Identity = 51/140 (36.43%), Postives = 84/140 (60.00%), Query Frame = 1
Query:  178 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNM 597
            +G G G  E ++T+ ++L ++DGF  ++ + V+ ATNR D+LD AL RPGR DR++    P+ + R  ILK+H R++++ + +D   +A    G SGA+L  +  EA +FA R  +  VT  +FE A  K+     ++ M
Sbjct:    7 AGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTM 146          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.608e-20
Identity = 65/221 (29.41%), Postives = 119/221 (53.85%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS---NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR-LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH------------VTQEDFEMAVAKVMKKETKKNMSLAKLW 615
            AVA     TF+ +S + L   Y+G+G ++VR LF +AR   PSIIF+DE+DS+ S R    S N     +R   E L + DG   +   ++I VL ATNR   LD+A LR  R  +++    P+E++R L + ++  ++ + +    L+++A+  +G SG++L A+  +A +  +RE  +             +T+ DF  ++ ++ +    ++++  + W
Sbjct:  547 AVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITESDFHSSLKRIRRSVAPQSLNSYEKW 761          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
NSF1_DROME1.213e-2038.37Vesicle-fusing ATPase 1 OS=Drosophila melanogaster... [more]
SPAST_PIG1.584e-2034.30Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=... [more]
PEX6_GLOLA1.584e-2033.70Peroxisomal biogenesis factor 6 OS=Glomerella lage... [more]
SPAST_XENTR2.069e-2036.93Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1[more]
SPAST_XENLA2.069e-2036.93Spastin OS=Xenopus laevis GN=spast PE=2 SV=1[more]
SEC18_SCHPO2.069e-2037.43Vesicular-fusion protein sec18 OS=Schizosaccharomy... [more]
FIGL1_XENLA2.069e-2032.00Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl... [more]
SPAST_ANOGA2.702e-2029.86Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5[more]
FTSH2_HAEIN2.702e-2036.43Cell division protease ftsH homolog 2 OS=Haemophil... [more]
SPAST_DROAN4.608e-2029.41Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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