EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.608e-20
Identity = 69/225 (30.67%), Postives = 117/225 (52.00%), Query Frame = 1
Query:    4 VAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM--ATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDI-LKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI------------HVTQEDFEMAVAKVMKKETKKNMSLAKLWE*SFPC 633
            +A  +  TF  +S S L   ++GEG +MVR LF +AR   P++IF+DEIDS+ S R   G G  +S  +R   E L QLDG   S++ ++L+  ATNR   +D+A  R  R+ +++  P P   +R  I + + S+    +   ++++I ++ +  SGA++  +C EA +  +R  +              +   DFE A   V    + K++ L + W  +F C
Sbjct:  454 IASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQR---GDGEHESS-RRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTADIATITPDQVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFGC 672          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_CAEBR (Probable spastin homolog spas-1 OS=Caenorhabditis briggsae GN=spas-1 PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.861e-20
Identity = 76/229 (33.19%), Postives = 120/229 (52.40%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGI---DLKKIAEKMNGASGAELKAVCTEAGMFALRE---RRIHVTQ---------EDFEMAVAKVMKKETKKNMSLAKLWE*SFPC 633
            AVA  +   F  +S S L   ++G+  + +R LF +AR   PSIIF+DEIDSI   R E      D+EV R M  E L Q DG  +S  ++I V+ ATNR   LD A+LR  R  ++I    P+ E+R +++    ++ ++M G+   D++ IA   +G S ++L A+C EA M  +RE    ++ VT           DF+ A+  +    + + +S    +  +F C
Sbjct:  321 AVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNGQPSIIFIDEIDSILCERSEK-----DAEVSRRMKTEFLVQFDGATSSPDDRILVIGATNRPYELDDAVLR--RFPKRIMLNLPDTEARKELITNTLKKHDMMDGLSSSDIRYIASNTSGFSNSDLVALCKEAAMVPVREIHRSKLSVTDGDKIRKIRASDFDTALRTIRPSTSDRILSKLSDFSRNFGC 542          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PEX6_NEUCR (Peroxisomal biogenesis factor 6 OS=Neurospora crassa GN=pex-6 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.861e-20
Identity = 62/194 (31.96%), Postives = 103/194 (53.09%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE----ASNKIKVLMATNRIDILDQALLRPGRIDRKIEF-PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGA-SGAELKAVCTEAGMFALRERRIHVTQEDFEMAVA 564
            A+A      F  V G EL+ +YIGE    VR +F  AR+  P ++F DE+DS+   R   G   G   + R + +LL +LDG          + V+ ATNR D+LD ALLRPGR D+ +    +   + ++ I++  +R+  L   + L+ +AE++    +GA+  A+C++A + A+  +   V  +  E+  A
Sbjct: 1043 AIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGG--VMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAVTRQATLVDTKIRELNAA 1234          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.861e-20
Identity = 72/225 (32.00%), Postives = 120/225 (53.33%), Query Frame = 1
Query:    4 VAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDI-LKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI----HVTQE--------DFEMAVAKVMKKETKKNMSLAKLWE*SFPC 633
            +A  +  TF  +S S L   ++GEG +MVR LF +AR H P++IF+DEIDS+ S R   G G  +S  +R   E L QLDG   S  ++I V+ ATNR   +D+A  R  R+ +++  P P   +R  I + + ++    +   +++ I  + +G SGA++  +C EA +  +R  ++     +T E        DF+ A   V    ++K++ L + W  +F C
Sbjct:  436 IACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQR---GEGEHESS-RRIKTEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMAKEHCSLAEQEVEAIVLQADGFSGADMTQLCREAALGPIRSIQLMDISTITPEQVRPIAYIDFQSAFLVVRPSVSQKDLELYENWNKTFGC 654          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.861e-20
Identity = 69/225 (30.67%), Postives = 117/225 (52.00%), Query Frame = 1
Query:    4 VAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM--ATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDI-LKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR------------ERRIHVTQEDFEMAVAKVMKKETKKNMSLAKLWE*SFPC 633
            +A  +  TF  +S S L   ++GEG +MVR LF +AR   P++IF+DEIDS+ S R   G G  +S  +R   E L QLDG   S++ ++L+  ATNR   +D+A  R  R+ +++  P P   +R  I + + S+    +   + + + ++ +G SGA++  +C EA +  +R            ++   +   DFE A   V    + K++ L + W  +F C
Sbjct:  457 IASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQR---GDGEHESS-RRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVNLMSKEQCCLTDEETELVVQQSDGFSGADMTQLCREASLGPIRSLHTADIATISPDQVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFGC 675          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEEL (Fidgetin-like protein 1 OS=Caenorhabditis elegans GN=figl-1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.861e-20
Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 1
Query:    4 VAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGI-------DLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            VA     TF  +S S L   ++GEG ++VR LF +AR   PS+IF+DEIDS+ S+R ES   +     +R   E L QLDG   +   ++ VL ATNR   LD+A  R  R  +++    P  ESR  I++      NL+ G        +L++I E  +G SGA+++ +CTEA M  +R+
Sbjct:  369 VASQCKATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSESEHESS----RRIKTEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR--RFQKRLYIALPEPESRTQIVQ------NLLVGTRHDITNHNLERIRELTDGYSGADMRQLCTEAAMGPIRD 537          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_DROWI (Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.341e-19
Identity = 65/221 (29.41%), Postives = 119/221 (53.85%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS---NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR-LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH------------VTQEDFEMAVAKVMKKETKKNMSLAKLW 615
            AVA     TF+ +S + L   Y+G+G ++VR LF +AR   PSIIF+DE+DS+ S R    S N     +R   E L + DG   +   ++I VL ATNR   LD+A LR  R  +++    P+E++R L + ++  ++ + +    L+++A+   G SG++L A+  +A +  +RE  +             +T++DF  ++ ++ +    ++++  + W
Sbjct:  554 AVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITEGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDFHNSLKRIRRSVAPQSLNSYEKW 768          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PEX6_ASHGO (Peroxisomal biogenesis factor 6 OS=Ashbya gossypii GN=PEX6 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.341e-19
Identity = 62/174 (35.63%), Postives = 96/174 (55.17%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE-ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP-NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGA-SGAELKAVCTEAGMFAL 513
            AVA +    F  V G EL+ +YIGE    VR +F  AR+  P +IF DE+DS+   R   G   G   + R + +LL +LDG     + + V+ ATNR D+LD+ALLRPGR D+ +    +   E + +IL+  +R+  L   + L  +A       +GA+  A+C++A + A+
Sbjct:  775 AVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGG--VMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAM 946          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.751e-19
Identity = 75/235 (31.91%), Postives = 121/235 (51.49%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS------------NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK-IHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE-------------RRIHVTQEDFEMAVAKVMKKETKKNMSLAKLWE*SF 627
            AVA  +  TF  VS S L+  Y+GE  ++VR LF MA++ +PSIIF+DEIDS+ +AR    S N +   +R   ELL Q     ++            +++ VL ATN    +D A  R  R  RK+  P P+ E+RL  LK + +++ N ++ +D + I E   G SG++L ++  EA M  +R+             R I +  +DF+ A+  + K  + +++   + W   F
Sbjct:  523 AVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTAR----SDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDKLMFADFDKIRGIEI--KDFQNALLTIKKSVSSESLQKYEEWSSKF 749          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.751e-19
Identity = 69/225 (30.67%), Postives = 116/225 (51.56%), Query Frame = 1
Query:    4 VAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM--ATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL-KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR------------ERRIHVTQEDFEMAVAKVMKKETKKNMSLAKLWE*SFPC 633
            +A  +  TF  +S S L   ++GEG +MVR LF +AR   P++IF+DEIDS+ S R   G G  +S  +R   E L QLDG   S++ ++L+  ATNR   +D+A  R  R+ +++  P P   +R  I+  + S+    +   +   + ++ +G SGA++  +C EA +  +R            ++   +   DFE A   V    + K++ L + W  +F C
Sbjct:  463 IASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQR---GDGEHESS-RRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVGNLMSKEQCCLSDEETDLVVQQSDGFSGADMTQLCREASLGPIRSLHAADIATISPDQVRPIAYIDFENAFKTVRPTVSPKDLELYENWNETFGC 681          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
FIGL1_HUMAN4.608e-2030.67Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 ... [more]
SPAST_CAEBR7.861e-2033.19Probable spastin homolog spas-1 OS=Caenorhabditis ... [more]
PEX6_NEUCR7.861e-2031.96Peroxisomal biogenesis factor 6 OS=Neurospora cras... [more]
FIGL1_XENTR7.861e-2032.00Fidgetin-like protein 1 OS=Xenopus tropicalis GN=f... [more]
FIGL1_RAT7.861e-2030.67Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fi... [more]
FIGL1_CAEEL7.861e-2037.57Fidgetin-like protein 1 OS=Caenorhabditis elegans ... [more]
SPAST_DROWI1.341e-1929.41Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1[more]
PEX6_ASHGO1.341e-1935.63Peroxisomal biogenesis factor 6 OS=Ashbya gossypii... [more]
TBP6_YEAST1.751e-1931.91Probable 26S protease subunit YTA6 OS=Saccharomyce... [more]
FIGL1_MOUSE1.751e-1930.67Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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