EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.654e-19
Identity = 68/180 (37.78%), Postives = 106/180 (58.89%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGF-EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM-NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 531
            AVA     TF  +S S+LV  ++GE  R+VR+LF MARE  PSIIF+DEIDS+  +R E     G+SE  R +  E L Q++G  +  + + VL ATN    LD A+ R  R +++I  P PN  +R  + +++  ++ + +   D K++A+  +G SG+++  V  +A M  +  RRIH
Sbjct:  181 AVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSE-----GESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPV--RRIH 351          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.691e-19
Identity = 60/167 (35.93%), Postives = 93/167 (55.69%), Query Frame = 1
Query:   25 TFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            TF  +S S+LV  ++GE  ++V+ LF +ARE+ PSIIF+DEIDS+  +R E    N     +R   E L Q+ G    N  I VL ATN   +LD A+ R  R +++I  P P   +R  + K+H     N +   D +++  K +G SGA++  +  +A M  +R+
Sbjct:  195 TFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE----NESEAARRIKTEFLVQMRGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.691e-19
Identity = 60/167 (35.93%), Postives = 92/167 (55.09%), Query Frame = 1
Query:   25 TFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            TF  +S S+LV  ++GE  ++V+ LF +ARE+ PSIIF+DEIDS+  +R E    N     +R   E L Q+ G    N  I VL ATN   +LD A+ R  R +++I  P P   +R  + K+H     N +   D + + +K  G SGA++  +  +A M  +R+
Sbjct:  195 TFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE----NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFKLHLGTTQNSLTEADFRDLGKKTEGYSGADISIIVRDALMQPVRK 355          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.482e-18
Identity = 59/167 (35.33%), Postives = 93/167 (55.69%), Query Frame = 1
Query:   25 TFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            TF  +S S+LV  ++GE  ++V+ LF +ARE+ PSIIF+DEIDS+  +R E    N     +R   E L Q+ G    N  I VL ATN   +LD A+ R  R +++I  P P   +R  + ++H     N +   D +++  K +G SGA++  +  +A M  +R+
Sbjct:  195 TFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE----NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRK 355          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.482e-18
Identity = 64/221 (28.96%), Postives = 117/221 (52.94%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS---NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR-LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH------------VTQEDFEMAVAKVMKKETKKNMSLAKLW 615
            AVA     TF+ +S + L   Y+G+G ++VR LF +AR   PSIIF+DE+DS+ S R    S N     +R   E L + DG   +   ++I VL ATNR   LD+A LR  R  +++    P  ++R L + ++  ++ + +    L ++A+  +G SG++L A+  +A +  +RE  +             +T++DF  ++ ++ +    ++++  + W
Sbjct:  546 AVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPGVQTRELLLSRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDFHNSLKRIRRSVAPQSLNSYEKW 760          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_DROSI (Spastin OS=Drosophila simulans GN=spas PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.482e-18
Identity = 64/221 (28.96%), Postives = 119/221 (53.85%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS---NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR-LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH------------VTQEDFEMAVAKVMKKETKKNMSLAKLW 615
            AVA     TF+ +S + L   Y+G+G ++VR LF +AR   PSIIF+DE+DS+ S R    S +     +R   E L + DG   +   ++I VL ATNR   LD+A LR  R  +++    P+E++R L + ++  ++ + +    L+++A+  +G SG++L A   +A +  +RE  +             +T++DF  ++ ++ +    ++++  + W
Sbjct:  535 AVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER----SSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTARPKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKW 749          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.482e-18
Identity = 64/221 (28.96%), Postives = 117/221 (52.94%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS---NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR-LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI------------HVTQEDFEMAVAKVMKKETKKNMSLAKLW 615
            AVA     TF+ +S + L   Y+G+G ++VR LF +AR   PSIIF+DE+DS+ S R    S N     +R   E L + DG   +   ++I VL ATNR   LD+A LR  R  +++    P+ ++R L + ++  ++ + +    L ++A+   G SG++L A+  +A +  +RE  +             +T++DF  ++ ++ +    ++++  + W
Sbjct:  559 AVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRQITEKDFHNSLKRIRRSVAPQSLNSYEKW 773          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.482e-18
Identity = 65/206 (31.55%), Postives = 104/206 (50.49%), Query Frame = 1
Query:   37 VSGSELVPIYIGEGSRMVRELFVMAR--------EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM---NLMR-GIDLKKIAEKMNGASGAELKAVCTEAGMFALRE----------------RRIHVTQEDFEMAVAKV 570
            V+G E++  Y+G     +R LF  A         E +  II  DE+DS+   R   G G G  +    + +LL ++DG +  N I V+  TNR D++D ALLRPGR + ++E   P+E+ RL I  I +++M   N+M   ++L ++A      SGAE++ +   A  FA+ +                 ++ VT+EDF  A+  V
Sbjct:  306 VNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTGVGD--NVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVTREDFLNALNDV 509          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.936e-18
Identity = 64/221 (28.96%), Postives = 117/221 (52.94%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS---NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR-LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH------------VTQEDFEMAVAKVMKKETKKNMSLAKLW 615
            AVA     TF+ +S + L   Y+G+G ++VR LF +AR   PSIIF+DE+DS+ S R    S N     +R   E L + DG   +   ++I VL ATNR   LD+A LR  R  +++    P  ++R L + ++  ++ + +    L ++A+  +G SG++L A+  +A +  +RE  +             +T++DF  ++ ++ +    ++++  + W
Sbjct:  542 AVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPEVQTRELLLSRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDFHNSLKRIRRSVAPQSLNSYEKW 756          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPA5L_XENTR (Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus tropicalis GN=spata5l1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.936e-18
Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHA---PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 513
            AVA       I +SG  +     GE    +R++F  ARE A   P+++F+DE+D++   R  S S    +   R + +LL  +DG ++ NK+  + AT+R D +D AL RPGR DR++    P  + R  IL++    M   R +D   +A+   G  GA+L A+C +A M A+
Sbjct:  244 AVAREVGAYVIGLSGPAIHGSRPGESEENLRKIFEKAREAACSGPALLFIDEVDALCPKRGHSNS----APENRVVAQLLTLMDGIDSDNKMVTVAATSRPDAIDPALRRPGRFDREVIIGTPTHKQRQAILEMMISNMPTDRDVDAAALADVTVGYVGADLTALCRDAAMQAV 413          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
VPS4_SCHPO6.654e-1937.78Suppressor protein of bem1/bed5 double mutants OS=... [more]
VPS4B_PONAB8.691e-1935.93Vacuolar protein sorting-associated protein 4B OS=... [more]
VPS4B_BOVIN8.691e-1935.93Vacuolar protein sorting-associated protein 4B OS=... [more]
VPS4B_MOUSE1.482e-1835.33Vacuolar protein sorting-associated protein 4B OS=... [more]
SPAST_DROVI1.482e-1828.96Spastin OS=Drosophila virilis GN=spas PE=3 SV=1[more]
SPAST_DROSI1.482e-1828.96Spastin OS=Drosophila simulans GN=spas PE=3 SV=1[more]
SPAST_DROGR1.482e-1828.96Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1[more]
SEC18_YEAST1.482e-1831.55Vesicular-fusion protein SEC18 OS=Saccharomyces ce... [more]
SPAST_DROMO1.936e-1828.96Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1[more]
SPA5L_XENTR1.936e-1833.91Spermatogenesis-associated protein 5-like protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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