EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.936e-18
Identity = 69/224 (30.80%), Postives = 115/224 (51.34%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM--ATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK--IHSRRMNLMRGIDLKKI---AEKMNGASGAELKAVCTEAGMFALR------------ERRIHVTQEDFEMAVAKVMKKETKKNMSLAKLW 615
            ++A      F  ++ S L   ++G+  ++V+ LF +A  H P+IIF+DE+DS+ S R    S N +    R   E L  LDG  ++ +I+VL+  ATNR   LD+A+ R  R  R++  P P  E+R  I++  IH  + NL    D++++   AE  +G SGA++  +C  A M  LR             +   VT +DF+ A+  + K  + ++    + W
Sbjct:  302 SIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKR----SANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR--RFVRRLYVPLPTREARQKIIEKLIHQVKHNL----DVRQVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTMDDFKQALRVISKSVSSEDCKQFEAW 515          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SEC18_CANAL (Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.529e-18
Identity = 56/202 (27.72%), Postives = 103/202 (50.99%), Query Frame = 1
Query:   37 VSGSELVPIYIGEGSRMVRELF--------VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMN----LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER---------------RIHVTQEDFEMAV 561
            V+G E++  Y+G     +R LF        +   +    +I  DE+DS+   R  SG  +G       + +LL+++DG +  N I V+  TNR+D++D ALLRPGR + +IE   P+E+ R DI  IH++++     L   ++  +++      +GAE++ +C  A  +A+                  ++ +T++DF +A+
Sbjct:  342 VNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQR-GSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRHTKKGALAQIDPESIAKMKITRDDFLLAL 542          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.357e-18
Identity = 62/180 (34.44%), Postives = 102/180 (56.67%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK------IHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            AVA     TF  +S S +V  + G+  ++VR LF +AR HAPS IF+DE++S+ S R  +G G      +R   ELL Q+DG   S+  + VL A+N    LD A+LR  R++++I    P++E+R  +++       +S  + L   +D   +  + +G SG++++ VC EA M  +R+
Sbjct:  310 AVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR-GTGPGGEHEGSRRMKTELLVQMDGLARSDDLVFVLAASNLPWELDYAMLR--RLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGSDIRLVCKEAAMRPVRK 486          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.609e-18
Identity = 71/208 (34.13%), Postives = 113/208 (54.33%), Query Frame = 1
Query:   28 FIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK--IHSRRMNLMRGIDLKKI-AEKMNGASGAELKAVCTEAGMFALRE------------RRIHVTQEDFEMAVAKVMKKETKKNM 597
            F+ VS + L   ++G+  ++VR LF +AR   P+IIF+DEIDSI   R E      ++EV R M  E L Q+DG  +S  +++ V+ ATNR + LD A+LR  R  ++I    PN  +RL ++   +   + +   G+  ++I AE  +G S ++L A+C EA M  +R+                +T  DFE+A+ K +K  T + M
Sbjct:  240 FLNVSAASLTSKWVGDAEKIVRALFQIARNGQPTIIFIDEIDSILCERNEK-----ETEVSRRMKTEFLIQMDGMLSSKDDRLLVIGATNRPEELDSAILR--RFPKRILIDVPNAAARLKLIMSLLEKTKTSFDLGLTQRQILAEWTHGYSNSDLVALCREAAMVPIRDLSRKDIKNLVSTELRPITLRDFEIAM-KAIKPSTNERM 439          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 9.609e-18
Identity = 62/180 (34.44%), Postives = 101/180 (56.11%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS-NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL------KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            AVA     TF  +S S +V  + G+  ++VR LF +AR HAPS IF+DE++S+ S R  +  G  +  + R   ELL Q+DG   S + + VL A+N    LD A+LR  R++++I    P+ E+R  ++         SR + L   ++   ++++  G SG+++K VC EA M  +R+
Sbjct:  306 AVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSL-RMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRPVRK 482          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.255e-17
Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGFEASNKIKVLM--ATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH-----------VTQEDFEMAVAKVMKKET 585
            A A    F FI +  S L   + GE  ++   +F +A +  PSIIF+DEIDS    R  S     D E    M  + ++  DG +     +V++  ATNR   LD A+LR  R+  +     PN   R DILK+     N+   ++L +IA++ +G SG++L+ +C +A +  +R+  +H           + QED + A+ K+ K ++
Sbjct:  149 ATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSS-----DHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRD-FVHQESPEEDFIRPIRQEDLQRAIEKMKKSKS 349          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.796e-17
Identity = 56/167 (33.53%), Postives = 94/167 (56.29%), Query Frame = 1
Query:   25 TFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            TF  VS S+L+  ++GE  ++V+ LF +AR+H PSIIF+DE+DS+  +R E    N     +R   E L Q+ G   +N    VL ATN   +LD A+ R  R +++I  P P E +R  + ++H     + +   ++ ++A K  G SGA++  +  ++ M  +R+
Sbjct:  188 TFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE----NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.796e-17
Identity = 56/167 (33.53%), Postives = 94/167 (56.29%), Query Frame = 1
Query:   25 TFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            TF  VS S+L+  ++GE  ++V+ LF +AR+H PSIIF+DE+DS+  +R E    N     +R   E L Q+ G   +N    VL ATN   +LD A+ R  R +++I  P P E +R  + ++H     + +   ++ ++A K  G SGA++  +  ++ M  +R+
Sbjct:  188 TFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE----NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.796e-17
Identity = 56/167 (33.53%), Postives = 94/167 (56.29%), Query Frame = 1
Query:   25 TFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            TF  VS S+L+  ++GE  ++V+ LF +AR+H PSIIF+DE+DS+  +R E    N     +R   E L Q+ G   +N    VL ATN   +LD A+ R  R +++I  P P E +R  + ++H     + +   ++ ++A K  G SGA++  +  ++ M  +R+
Sbjct:  188 TFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE----NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.796e-17
Identity = 60/166 (36.14%), Postives = 95/166 (57.23%), Query Frame = 1
Query:    7 AHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARMESGSGNG-DSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 486
            AH     F+ + G EL+  ++GE  R +R +F  ARE A    P I+F DE+DSI   R     G G  S+V+ T++ +LL+++DG E    + V+ A+NR D++D A+LRPGR+D KI+   P+ E+  D   I+S+ +     +    +AE  +G   A +KA+
Sbjct:  322 AHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR-----GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQD---IYSKYLTEFLPVHADDLAE-FDGDRSACIKAM 478          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
FIGL1_DROME1.936e-1830.80Fidgetin-like protein 1 OS=Drosophila melanogaster... [more]
SEC18_CANAL2.529e-1827.72Vesicular-fusion protein SEC18 OS=Candida albicans... [more]
KATL2_XENTR7.357e-1834.44Katanin p60 ATPase-containing subunit A-like 2 OS=... [more]
SPAST_BRUMA9.609e-1834.13Probable spastin homolog Bm1_53365 OS=Brugia malay... [more]
KATL2_HUMAN9.609e-1834.44Katanin p60 ATPase-containing subunit A-like 2 OS=... [more]
ATD1B_DANRE1.255e-1730.62ATPase family AAA domain-containing protein 1-B OS... [more]
VPS4A_RAT2.796e-1733.53Vacuolar protein sorting-associated protein 4A OS=... [more]
VPS4A_MOUSE2.796e-1733.53Vacuolar protein sorting-associated protein 4A OS=... [more]
VPS4A_HUMAN2.796e-1733.53Vacuolar protein sorting-associated protein 4A OS=... [more]
MPA_MYCTU2.796e-1736.14Proteasome-associated ATPase OS=Mycobacterium tube... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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