EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.004e-15
Identity = 63/210 (30.00%), Postives = 103/210 (49.05%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGFEASNKIKVLM--ATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE------RRIH-------VTQEDFEMAVAKVMKKE 582
            A A      FI +  S L   + GE  ++   +F +A +  PSIIF+DEIDS    R  S     D E    M  + ++  DG +  +  +V++  ATNR   LD A++R  R+  +     P  + R  ILK+  +  N+ R +DL ++A++ +G SG++LK +C +A +  +RE         H       V Q+D   A+ K+ K +
Sbjct:  145 ATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSS-----DHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSK 347          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.617e-15
Identity = 59/174 (33.91%), Postives = 97/174 (55.75%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF-EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 516
            AVA     TF  +S S++V  ++G+  ++V++LF MARE   S+IF+DE+DS+ S+R +  S       +R   E L Q++G    S+ I VL ATN    LD A+ R  R +++I    P  ++R  + +IH     N +   D KK+A+   G SG+++ ++  +A M  +R
Sbjct:  187 AVATEISSTFFSISPSDIVTKWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSLCSSRNDQES----ESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWGLDLAIRR--RFEKRIYIGLPEPQARAKMFQIHIGSTPNTLVQADYKKLADLTEGYSGSDIGSLVKDAIMQPVR 354          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.464e-15
Identity = 56/175 (32.00%), Postives = 92/175 (52.57%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG-IDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            A+A  +   FI +  S ++  + GE +++V  +F +A +  P IIF+DEIDS    R  +     D EV  T+  E +   DG   + ++ ++ ATNRI+ +D A LR  R+ ++     P  + R  IL +  +   L     DL+ IA+   G SG++LK +C EA + A +E
Sbjct:  145 ALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRERSST-----DHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKE 312          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: YJNA_SCHPO (Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe GN=SPCC24B10.10c PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.614e-15
Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG-FEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            A+A  +  TFI VS   L   + GE +++V  LF +AR+  P+IIF+DEID+    R  +        + +   E ++  DG     +++ VL ATNR   +D+A+ R  R+ +    P PN E R  IL+++ +++ L    D   +     G SG+ +K VC  A     RE
Sbjct:  144 ALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRT----DHEAMAQIKAEFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSALSVPRRE 311          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS2_METTM (Putative 26S protease regulatory subunit homolog MTH1011 OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14
Identity = 53/189 (28.04%), Postives = 99/189 (52.38%), Query Frame = 1
Query:   37 VSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG-SARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMF-ALRERRIHVTQEDFEMAVAKVMKKETKKNM 597
            +  + L+  ++G+G+R + EL+ +A + APS+IF+DE+D+IG   R +S  G    +V   +  LL ++DG   +  +  + ATN  ++LD A+    R + +IEF  P ++ R  +L+ +   M L     + K+ +   G SG ++K    +  +  AL +    V +E  E A+ +   K   ++M
Sbjct:  188 IKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRFQSLRG----DVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSVDKLVKLTKGMSGRDIKERVLKTALHRALADESPRVEREHIEYALKERDLKSEPRHM 370          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.696e-14
Identity = 56/173 (32.37%), Postives = 91/173 (52.60%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 519
            A A  +   FI +  S L   + GE  ++   +F +A +  P IIF+DEIDS    R  S      + ++   + L + LD  E ++++ V+ ATNR   +D A+LR  R+        PN   R +IL++     NL   I+LK+IA +  G SG++LK +C +A M+ +R+
Sbjct:  148 ATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNR-SSMDHEATAMMKAQFMSLWDGLDTGE-NSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVRD 316          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.893e-14
Identity = 57/203 (28.08%), Postives = 98/203 (48.28%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQL-----------------DGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR-LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 555
            AVA  +  TF  +S S L   Y+GE  ++VR LF +A++ +PSIIF+DEIDSI  +R           ++   L   + L                 +G E   ++ VL ATN    +D+A  R  R  R+   P P +++R +   K+ S + + +   D  ++ +   G SG+++ ++  +A M  LR+    + + + EM
Sbjct:  657 AVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSLAKDAAMGPLRDLGDKLLETEREM 857          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.445e-14
Identity = 59/182 (32.42%), Postives = 93/182 (51.10%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE---------ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK-IHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 516
            AVA     TF  +S S L   Y+G+  ++VR LF +A+    S+IF+DEIDSI SAR +SG+ +  S  +R   E L Q               S ++ VL ATN    +D+A  R  R  ++   P P +E+R   L  +   +++ +   DL+++     G SG+++ A+  +A M  LR
Sbjct:  431 AVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARNDSGNEHESS--RRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGPLR 608          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGN_MOUSE (Fidgetin OS=Mus musculus GN=Fign PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.418e-14
Identity = 58/226 (25.66%), Postives = 111/226 (49.12%), Query Frame = 1
Query:    4 VAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF--EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL-KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR------------ERRIHVTQEDFEMAVAKVMKKETKKNMSLAKLWE*SFPCA 636
            +A     TF +++GS LV  +IGE  +++   F++AR   PS+IF+ +ID + S+++        S V R   E L QLD     A ++I V+ AT++ + +D++L R     +++  P P+  +R  I+ ++ ++    +   +   + ++  G SG ++  +C EA +  L              +   VT +DFE A  K+    ++K + +   W   F C+
Sbjct:  539 IASQLGATFFKIAGSGLVAKWIGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQV----SEEHSPVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDESLRR--YFMKRLLIPLPDSTARHQIIVQLLTQHNYCLNDKEFALLVQRTEGFSGLDVAHLCQEAAVGPLHAMPATDLSAIMPSQLRPVTYQDFENAFCKIQPSISQKELDMYVEWNKMFGCS 758          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGN_HUMAN (Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.418e-14
Identity = 58/226 (25.66%), Postives = 113/226 (50.00%), Query Frame = 1
Query:    4 VAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF--EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL-KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEA-----------GMFALRERRIH-VTQEDFEMAVAKVMKKETKKNMSLAKLWE*SFPCA 636
            +A     TF +++GS LV  ++GE  +++   F++AR   PS+IF+ +ID + S+++        S V R   E L QLD     A ++I V+ AT++ + +D++L R     +++  P P+  +R  I+ ++ S+    +   +   + ++  G SG ++  +C EA            + A+   ++  VT +DFE A  K+    ++K + +   W   F C+
Sbjct:  539 IASQLGATFFKIAGSGLVAKWLGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQV----NEEHSPVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDESLRR--YFMKRLLIPLPDSTARHQIIVQLLSQHNYCLNDKEFALLVQRTEGFSGLDVAHLCQEAVVGPLHAMPATDLSAIMPSQLRPVTYQDFENAFCKIQPSISQKELDMYVEWNKMFGCS 758          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
ATAD1_HUMAN2.004e-1530.00ATPase family AAA domain-containing protein 1 OS=H... [more]
VPS4_DICDI2.617e-1533.91Vacuolar protein sorting-associated protein 4 OS=D... [more]
MSP1_YEAST4.464e-1532.00Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 P... [more]
YJNA_SCHPO7.614e-1531.61Uncharacterized AAA domain-containing protein C24B... [more]
PRS2_METTM1.299e-1428.04Putative 26S protease regulatory subunit homolog M... [more]
ATD1A_DANRE1.696e-1432.37ATPase family AAA domain-containing protein 1-A OS... [more]
SAP1_YEAST2.893e-1428.08Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 P... [more]
SUR2_SCHPO6.445e-1432.42Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 ... [more]
FIGN_MOUSE8.418e-1425.66Fidgetin OS=Mus musculus GN=Fign PE=1 SV=1[more]
FIGN_HUMAN8.418e-1425.66Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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