EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS2_METTH (Putative 26S protease regulatory subunit homolog MTH_1011 OS=Methanobacterium thermoautotrophicum GN=MTH_1011 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.875e-13
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = 1
Query:   37 VSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELK-AVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNM 597
            +  + L+  ++G+G+R + EL+ +A + APS+IF+DE+D+IG  R         SEV      LL ++DG   +  +  + ATN  ++LD+A+    R + +IEF  P++E R  +L+ +   M L     + K+ +     SG ++K  V   A   A+ E    V  E  E A+ +       K+M
Sbjct:  188 IKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRYQSLRGDVSEVVNA---LLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPVDKLVKLTREMSGRDIKDRVLKTALHRAIAEDSESVRAEHIEYALKERKVSGEPKHM 370          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.449e-13
Identity = 61/185 (32.97%), Postives = 92/185 (49.73%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS---------NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRL----DILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 516
            AVA  +   F  +S S L   ++GE  ++VR LF +A++ +PSIIF+DEIDS+ SAR  S  GN     +R   E L Q      +          ++ VL ATN    +D A  R  R  R+   P P+E +R     ++LK     ++L    D++ I +     SG++L A+  +A M  LR
Sbjct:  511 AVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLE---DIEAIVKATEYYSGSDLTALAKDAAMGPLR 688          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FIGN_DANRE (Fidgetin OS=Danio rerio GN=fign PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.126e-13
Identity = 57/220 (25.91%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   28 FIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL-KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEA--------------GMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAKLWE*SFPCA 636
            F+ +SGS LV  ++GEG ++V+  F++AR   PS++F+ ++D + S+++       +S V R   ELL QLDG  +S    + V+ +T++ + +D++L R     +++  P P+  +R  I+ ++ S+    +   ++  + ++ +G SG ++  +C EA              GM   + R   V+ +DFE    K+    ++K +     W   F C+
Sbjct:  525 FLLLSGSALVTKWLGEGEKIVQASFLIARCRQPSVVFISDVDLLLSSQLSE-----ESPVNRIKSELLLQLDGVLSSPEEHVLVVCSTSKPEEIDESLRR--YFVKRLLVPLPDATARHQIISQLLSQHNYCLSDKEVTLLVQRTDGFSGLDVVRLCQEALVGPLHGMPGADLSGMIPGQMR--PVSYQDFENVFCKIQPSISQKELDTYTEWNKMFGCS 735          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: YR476_MIMIV (Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R476 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.216e-12
Identity = 52/184 (28.26%), Postives = 100/184 (54.35%), Query Frame = 1
Query:   28 FIRVSGSELVPIYIGEGSRMVRELFVMARE----HAP-SIIFMDEIDSIGSARMESGSGNGDSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM----NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL-RERRIHVTQED 546
            F  +SG E+   ++G     +R +F  A++    H   S ++M  ID I  A + S SG+  + V+ +++ + L ++DG E  N +  +  TNR+++LD A +R GR    I+   P++E R+ I +IH++++     L   +D+ K+A      SGA+++ +   A +++L R  ++ V  +D
Sbjct:  634 FRLMSGPEIFNKWVGGSESNIRAIFKPAKDAWKKHGDKSPVYMVVIDEI-DAMLPSRSGSDGNPVRDSVVNQFLAEMDGLEVFNNLICIGITNRLELLDPATIRSGRFGIHIKIDLPDQEGRVKIFQIHTKKLQELNRLSDDVDISKLAVITEEFSGADIEGMVELASVYSLERLNKLDVINDD 816          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FTSH_OLTVI (Cell division protease ftsH homolog OS=Oltmannsiellopsis viridis GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 44/153 (28.76%), Postives = 84/153 (54.90%), Query Frame = 1
Query:  142 DEIDSIGSARME-SGSGNGDSEVQRTMLE----LLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 585
            DE+++  S   + S   + + EV++  L     LL ++DG    N + V  ATNR ++LD AL+RPGR D+ +    P ++ R++ILK++++++   + I  +  A +  G S A+L A+  ++ + A+   + H T +  E  +  + K +T
Sbjct: 1474 DEMETRSSESTKASHESSNEMEVEKNQLSALIRLLVEMDGLNPLNGVIVFGATNRPEVLDPALIRPGRFDQILPIELPGKQKRVEILKLYAKKLGTAKSISWEYFANRTVGLSAADLAAIMNQSTILAVFNDQRH-TLKTLEYGLNIIYKPKT 1625          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: YCF46_ODOSI (Uncharacterized AAA domain-containing protein ycf46 OS=Odontella sinensis GN=ycf46 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.033e-12
Identity = 52/206 (25.24%), Postives = 94/206 (45.63%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSR--RMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAKL 612
            A+A       +++    L    +GE    +R++  +A   +P I+++DE+D   S     G     + V  T +  L+     E +  + V+   N +D+L   ++R GR D       P  E R +I KIH +  R N  +  D KK+A+     SGAE++    EA M+   +++   T +D  +A+ +++     +N    KL
Sbjct:  278 AIATEWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSPCILWIDEMDKAFSNNDSRGDSGTSNRVLATFISWLS-----EKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGAEIRQSIIEA-MYQAFDQQREFTTDDICLALKQLIPLAQLENSQTLKL 477          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: FTSH_CHLVU (Cell division protease ftsH homolog OS=Chlorella vulgaris GN=ftsH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.755e-11
Identity = 41/138 (29.71%), Postives = 77/138 (55.80%), Query Frame = 1
Query:  199 SEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAK 609
            +E Q ++L +LL +LDG +  N + +  ATNR ++LD ALLRPGR D+ ++   P ++ R++IL+ + + +   + +      E+  G + A+L  +  E+ + A+  +  H T E  E  + ++   E++K   L K
Sbjct: 1148 NEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQTLGYQKTMPWAYFGERTVGFTAADLATLMNESALKAILNQSNH-TIETLEHGIERLTTSESEKYTVLKK 1284          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: Y4KL_RHISN (Uncharacterized AAA family ATPase y4kL OS=Rhizobium sp. (strain NGR234) GN=NGR_a02840 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11
Identity = 57/193 (29.53%), Postives = 93/193 (48.19%), Query Frame = 1
Query:   34 RVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAKL 612
            RV    L+  Y+GE +  +R+ F  AR+  P ++F DE D++   R +SG  N   E++R +  LL  +D  +    +  + ATN    LD A+ R  R D  + F  P        LK+  +  N+    D  + +  + G S AE++ VCT+A    + ERR  V + DF  A    ++ E ++    A+L
Sbjct:  148 RVKLDRLISSYLGETATNIRKTFEFARKQ-PCVLFFDEFDALARTRDDSGEHN---ELRRVVNSLLLFIDNMQPKGFL--IAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFK--NVPVAFDPARNSAALEGYSFAEIERVCTQAIKAMIIERRKQVQERDFNRA----LQDEARRRAGQARL 326          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
PRS2_METTH1.875e-1329.26Putative 26S protease regulatory subunit homolog M... [more]
YKX4_SCHPO2.449e-1332.97Uncharacterized AAA domain-containing protein C328... [more]
FIGN_DANRE7.126e-1325.91Fidgetin OS=Danio rerio GN=fign PE=2 SV=1[more]
YR476_MIMIV1.216e-1228.26Putative AAA family ATPase R476 OS=Acanthamoeba po... [more]
FTSH_OLTVI3.537e-1228.76Cell division protease ftsH homolog OS=Oltmannsiel... [more]
YCF46_ODOSI6.033e-1225.24Uncharacterized AAA domain-containing protein ycf4... [more]
FTSH_CHLVU1.755e-1129.71Cell division protease ftsH homolog OS=Chlorella v... [more]
Y4KL_RHISN2.292e-1129.53Uncharacterized AAA family ATPase y4kL OS=Rhizobiu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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