EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.200e-53
Identity = 110/196 (56.12%), Postives = 140/196 (71.43%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETK 588
            AVA+ T  TF+RV G+EL+  Y+GEG ++VRELF +A  HAPSIIF+DEID+IG  R  + SG G  EVQRTMLELLNQLDGF+  N IKV+MATN+I+ LD AL+RPGRIDRKIEF  P+  ++  I  IH+ RM L   ++++ +       SGA++KA+CTEAGM ALRERR  VT +DF  A  KV   + K
Sbjct:  222 AVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSG-GRREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFISAREKVFFSKQK 416          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.202e-52
Identity = 103/194 (53.09%), Postives = 145/194 (74.74%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            A A  T  TF++++G +LV ++IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S   +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R  IL+IHSR+MN+   ++ +++A   +  +GA+LKAVC EAGM ALR     VT EDF   + +V  K+
Sbjct:  223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKK 415          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 1.202e-52
Identity = 103/194 (53.09%), Postives = 145/194 (74.74%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            A A  T  TF++++G +LV ++IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S   +GD EVQRTMLELLNQLDGF +  +IKV+ ATNR DILD AL+R GR+DRKIEFP+P+EE+R  IL+IHSR+MN+   ++ +++A   +  +GA+LKAVC EAGM ALR     VT EDF   + +V  K+
Sbjct:  229 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKK 421          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.049e-52
Identity = 104/190 (54.74%), Postives = 143/190 (75.26%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 570
            AVAH T   F+RV GSELV  YIGEG+R+VRELF +A++ APSIIF+DEID+IG+ R +S + +GD EVQRT+++LL ++DGF+    +K++ ATNRIDILD+ALLRPGR DR IE P P+ + RL ILKIH++ MN+   ++L +++    G +GA+L+A+C EAGMFA+R  R  V  EDF  A+ K+
Sbjct:  206 AVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTT-SGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDKL 394          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.049e-52
Identity = 113/192 (58.85%), Postives = 140/192 (72.92%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 576
            AVA+ T   FIRV GSELV  YIGEG+RMVRELF MAR     I+F DEID+IG AR + G G+ D+EVQRTMLE+L QLDGF+A   IKVLMATNR DILD ALLRPGR+DRK+EF  P+ E R  I KIH+R M+  R I  + +A     ++GA++++VC EAGM+A+  RR  VT++DF  AV KV+K
Sbjct:  258 AVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGS-DNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVK 448          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.049e-52
Identity = 101/194 (52.06%), Postives = 145/194 (74.74%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            A A  T  TF++++G +LV ++IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S    GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R  I++IHSR+MN+   ++ +++A   +  +GA+ KAVC EAGM ALR     +T ED+   + +V  K+
Sbjct:  239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 431          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3)

HSP 1 Score: 206.068 bits (523), Expect = 2.049e-52
Identity = 101/194 (52.06%), Postives = 145/194 (74.74%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            A A  T  TF++++G +LV ++IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S    GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R  I++IHSR+MN+   ++ +++A   +  +GA+ KAVC EAGM ALR     +T ED+   + +V  K+
Sbjct:  239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 431          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.677e-52
Identity = 103/194 (53.09%), Postives = 143/194 (73.71%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            A A  T  TF++++G +LV ++IG+G+++VR+ F +A+E AP IIF+DEID+IG+ R +S   +GD EVQRTMLELLNQLDGF +  +IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R  IL+IHSR+MN+   ++ +++A   +  +GA+LKAVC EAGM ALR     V  EDF   + +V  K+
Sbjct:  224 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 416          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.677e-52
Identity = 103/194 (53.09%), Postives = 143/194 (73.71%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            A A  T  TF++++G +LV ++IG+G+++VR+ F +A+E AP IIF+DEID+IG+ R +S   +GD EVQRTMLELLNQLDGF +  +IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R  IL+IHSR+MN+   ++ +++A   +  +GA+LKAVC EAGM ALR     V  EDF   + +V  K+
Sbjct:  224 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 416          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3)

HSP 1 Score: 205.297 bits (521), Expect = 3.496e-52
Identity = 102/194 (52.58%), Postives = 145/194 (74.74%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            A A  T  TF++++G +LV ++IG+G+++VR+ F++A+E +P IIF+DEID+IG+ R +S   +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R  IL+IHSR+MN+   ++ +++A   +  +GA+LKAVC EAGM ALR     V  EDF   + +V  K+
Sbjct:  223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 415          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
PRS4_ENCCU9.200e-5356.1226S protease regulatory subunit 4 homolog OS=Encep... [more]
PRS6A_SOLLC1.202e-5253.0926S protease regulatory subunit 6A homolog OS=Sola... [more]
PRS6A_ORYSJ1.202e-5253.0926S protease regulatory subunit 6A homolog OS=Oryz... [more]
PSMR_METMJ2.049e-5254.74Proteasome-activating nucleotidase OS=Methanoculle... [more]
PRS7B_ARATH2.049e-5258.8526S protease regulatory subunit 7 homolog B OS=Ara... [more]
PRS6A_RAT2.049e-5252.0626S protease regulatory subunit 6A OS=Rattus norve... [more]
PRS6A_HUMAN2.049e-5252.0626S protease regulatory subunit 6A OS=Homo sapiens... [more]
PS6AA_ARATH2.677e-5253.0926S protease regulatory subunit 6A homolog A OS=Ar... [more]
PRS6A_BRACM2.677e-5253.0926S protease regulatory subunit 6A homolog OS=Bras... [more]
PS6AB_ARATH3.496e-5252.5826S protease regulatory subunit 6A homolog B OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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