EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.121e-49
Identity = 101/190 (53.16%), Postives = 134/190 (70.53%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 570
            AVA      F++V  S +V  YIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ + D E+QRT++ELLNQ+DGF+  +++K++MATNR D LD ALLRPGR+DRKI    PNE++RLDILKIH+  +     ID + I +  +G +GA+L+ VCTEAGMFA+R     V QEDF  AV KV
Sbjct:  186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.121e-49
Identity = 101/190 (53.16%), Postives = 134/190 (70.53%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 570
            AVA      F++V  S +V  YIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ + D E+QRT++ELLNQ+DGF+  +++K++MATNR D LD ALLRPGR+DRKI    PNE++RLDILKIH+  +     ID + I +  +G +GA+L+ VCTEAGMFA+R     V QEDF  AV KV
Sbjct:  186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.171e-49
Identity = 97/193 (50.26%), Postives = 139/193 (72.02%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKK 579
            AVA+HT  TFIRV+GSE V  Y+GEG RMVR++F +ARE APSI+F+DE+DSI + R ++ S + D EVQR ++ELLNQ+DGF+ +  +KV+MATNR D +D ALLRPGR+DRKIEFP P+   +  +    + +M+L   +D++ +  +    S A++ ++C EAGM A+R  R  VTQ DFE A +KV+++
Sbjct:  187 AVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDA-STSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVVER 378          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.171e-49
Identity = 101/190 (53.16%), Postives = 133/190 (70.00%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 570
            AVA      F++V  S +V  YIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ + D E+QRT++ELLNQ+DGF+  +++K++MATNR D LD ALLRPGR+DRKI    PNE++RLDILKIH+  +     ID + I +  +G +GA+L  VCTEAGMFA+R     V QEDF  AV KV
Sbjct:  186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.053e-48
Identity = 95/196 (48.47%), Postives = 144/196 (73.47%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETK 588
            A A  +  TF++++  +LV ++IG+G+++VR+ F +A+E +P+IIF+DE+D+IG+ R +S    GD EVQRTMLELLNQLDGF + +++KV+ ATNR+D LD ALLR GR+DRK+EFP PNEE+R+ IL+IHSR+M +   I+ +++A   +  +GA LK+VC EAGM ALR+    +  E F   + +V  +++K
Sbjct:  238 ACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.375e-48
Identity = 104/190 (54.74%), Postives = 138/190 (72.63%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 570
            AVA  T  TFIRV GSELV  +IGEG+R+VRE+F +ARE APSI+F+DEID+I S R++ G+ +GD EVQRTML+LL +LDGF+  + +KV+ ATNR+D++D A+LRPGR DR IE P P+   RL+IL IH+R+  +   +DL+ IA+   G SGA+LKAV  EAG  A+R     +T +D   AV KV
Sbjct:  192 AVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGT-SGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKV 380          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.375e-48
Identity = 99/198 (50.00%), Postives = 138/198 (69.70%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKN 594
            AVAHHT   FIRV GSE V  Y+GEG RMVR++F +A+E+AP+IIF+DEID+I + R ++ +G  D EVQR +LELLNQ+DGF+ +  +KV+MATNR D LD ALLRPGR+DRKIEFP P+   +  I    + +MNL   +DL+    + +  SGA++ ++C   GM A+RE    V  +DFE A   V+KK+ +++
Sbjct:  218 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQEH 414          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.795e-48
Identity = 97/193 (50.26%), Postives = 137/193 (70.98%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKK 579
            AVAHHT   FIRV GSE V  Y+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G  D EVQR ++ELLNQ+DGF+ +  +KV+MATNR D LD ALLRPGR+DRKIEFP P+   +  + ++ + +MNL   +DL+    + +  S AE+ A+C EAGM A+R+ R  +  +DFE      +KK
Sbjct:  213 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKK 404          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.345e-48
Identity = 101/195 (51.79%), Postives = 137/195 (70.26%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 585
            AVA +T  +FIRV GSE V  Y+GEG RMVR++F +A+E++PSIIF+DEID+I + R ++ +G  D EVQR +LELLNQ+DGF+ S  +KV+MATNR D LD ALLRPGR+DRKIEFP P+   +  +      RMNL   +DL+    + +  SGA++ ++C EAGM A+RE R  V  +D E A   V+KK+T
Sbjct:  214 AVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDT 407          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48
Identity = 96/193 (49.74%), Postives = 137/193 (70.98%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKK 579
            AVA+HT   FIRV GSE V  Y+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G  D EVQR ++ELLNQ+DGF+ +  +KV+MATNR D LD ALLRPGR+DRKIEFP P+   +  + ++ + +MNL   +DL+    + +  S AE+ A+C EAGM A+R+ R  +  +DFE      +KK
Sbjct:  208 AVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKK 399          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
PRS10_MOUSE2.121e-4953.1626S protease regulatory subunit S10B OS=Mus muscul... [more]
PRS10_HUMAN2.121e-4953.1626S protease regulatory subunit S10B OS=Homo sapie... [more]
PRS6B_ENCCU6.171e-4950.2626S protease regulatory subunit 6B homolog OS=Ence... [more]
PRS10_BOVIN6.171e-4953.1626S protease regulatory subunit S10B OS=Bos taurus... [more]
PRS6A_SCHPO1.053e-4848.4726S protease regulatory subunit 6A OS=Schizosaccha... [more]
PSMR_AERPE1.375e-4854.74Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]
PRS6B_MOUSE1.375e-4850.0026S protease regulatory subunit 6B OS=Mus musculus... [more]
PRS6B_SOLTU1.795e-4850.2626S protease regulatory subunit 6B homolog OS=Sola... [more]
PRS6B_CAEEL2.345e-4851.79Probable 26S protease regulatory subunit 6B OS=Cae... [more]
PRS6B_ARATH6.823e-4849.7426S protease regulatory subunit 6B homolog OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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