EY665449

Overview
NameEY665449
Unique NameEY665449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 2.587e-17
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1
Query:  202 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGGLG 471
            +KV INGFGRIGR  LR  +  +   LEVVA+ND    +    ++ KYDST G F+  V+ V    + ++ K I V   ++P N+ WG  G
Sbjct:    3 VKVGINGFGRIGRIVLR--NAIEHGDLEVVAVNDPFIDLDYMVYMFKYDSTHGRFKGSVE-VKDGKLYINNKAIAVFGEKDPANIKWGEAG 90          

HSP 2 Score: 50.447 bits (119), Expect = 2.587e-17
Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 2
Query:  461 GDLGIDLVIEGTGVFVEREGAGKHIQAGAKKVLITAPRKG*HPNPTVVGGPMRNALQAR*TPSSEMLLG---TTNCLAPFLQGSWTKSFGIIQG 733
            G+ G + V+E TGVF   E AG H++ GAKKV+I+AP       P  V G   +A +    P  +++     TTNCLAP L      +F II+G
Sbjct:   87 GEAGAEYVVESTGVFTTTEKAGVHLKGGAKKVVISAPSA---DAPMFVCGVNLDAYK----PEYQIVSNASCTTNCLAP-LAKVIHDNFTIIEG 172          
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=epd PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.587e-17
Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = 1
Query:  202 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPW 459
            ++VAING+GRIGR+ LR  +   K   +++VAIN+    +   HL +YD+T G F   VK +    + +    I+++   +P  LPW
Sbjct:    2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINELAKPEAMLHLTQYDTTHGRFHTQVK-LDNQHMIIGDDAIKLLHEPDPAKLPW 87          

HSP 2 Score: 51.2174 bits (121), Expect = 2.587e-17
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 2
Query:  443 PSISPGGDLGIDLVIEGTGVFVEREGAGKHIQAGAKKVLITAPRKG*HPNPTVVGGPMRNALQAR*TPSSEMLLGTTNCLAPFL 694
            P+  P  ++ ID+V E TGV  +R     HIQAGAK+VLI+ P      + T+V G  ++ L+A  T  S     TTNC+ P +
Sbjct:   82 PAKLPWKEMDIDIVFEATGVINDRLECEAHIQAGAKQVLISHPSSS-DVDATIVFGVNQDLLKAEHTVVSNASC-TTNCIVPVI 163          
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: E4PD_SHESW (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=epd PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 3.363e-17
Identity = 31/87 (35.63%), Postives = 51/87 (58.62%), Query Frame = 1
Query:  202 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPW 459
            ++VAING+GRIGR+ LR  +   K   +++VAIN+    +   HL +YD+T G F+  VK V  + + +    I+++   +   LPW
Sbjct:    2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINELAKPEAIIHLTQYDTTHGRFQHKVKLV-DNHMLIGDDAIKILHEPDAAKLPW 87          

HSP 2 Score: 53.1434 bits (126), Expect = 3.363e-17
Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 2
Query:  455 PGGDLGIDLVIEGTGVFVEREGAGKHIQAGAKKVLITAPRKG*HPNPTVVGGPMRNALQAR*TPSSEMLLGTTNCLAPFLQGSWTKSFGIIQG 733
            P  ++ ID+V E TGV ++R+    HI AGAK+VLI+ P      + T+V G   + L+A  T  S     TTNC+ P +     K FG+  G
Sbjct:   86 PWREMDIDIVYEATGVILDRQSCEAHIHAGAKQVLISHPSSA-DVDGTIVYGVNHDLLRAEHTVVSNASC-TTNCIVPVID-VLDKHFGVKSG 175          
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPC (D-erythrose-4-phosphate dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=epd PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 5.683e-17
Identity = 31/87 (35.63%), Postives = 51/87 (58.62%), Query Frame = 1
Query:  202 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPW 459
            ++VAING+GRIGR+ LR  +   K   +++VAIN+    +   HL +YD+T G F+  VK V  + + +    I+++   +   LPW
Sbjct:    2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINELAKPEAIIHLTQYDTTHGRFQHKVKLV-DNHMLIGDDAIKILHEPDAAKLPW 87          

HSP 2 Score: 52.373 bits (124), Expect = 5.683e-17
Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 2
Query:  455 PGGDLGIDLVIEGTGVFVEREGAGKHIQAGAKKVLITAPRKG*HPNPTVVGGPMRNALQAR*TPSSEMLLGTTNCLAPFLQGSWTKSFGIIQG 733
            P  ++ ID+V E TGV ++R+    HI AGAK+VLI+ P      + T+V G   + L+A  T  S     TTNC+ P +     K FG+  G
Sbjct:   86 PWREMDIDIVYEATGVILDRQSCEAHIHAGAKQVLISHPSSA-DVDGTIVYGVNHDLLRAGHTVVSNASC-TTNCIVPVID-VLDKHFGVKSG 175          
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: G3P_DANRE (Glyceraldehyde-3-phosphate dehydrogenase OS=Danio rerio GN=gapdh PE=2 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 5.686e-17
Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 1
Query:  202 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGGLG 471
            +KV INGFGRIGR   R     K   +E+VAIND    +    ++ +YDST G ++ +VK  G   + +DG  I V S R+P N+ WG  G
Sbjct:    2 VKVGINGFGRIGRLVTRAAFLTKK--VEIVAINDPFIDLDYMVYMFQYDSTHGKYKGEVKAEGGK-LVIDGHAITVYSERDPANIKWGDAG 89          

HSP 2 Score: 47.7506 bits (112), Expect = 5.686e-17
Identity = 36/91 (39.56%), Postives = 44/91 (48.35%), Query Frame = 2
Query:  461 GDLGIDLVIEGTGVFVEREGAGKHIQAGAKKVLITAPRKG*HPNPTVVGGPMRNALQAR*TPSSEMLLGTTNCLAPFLQGSWTKSFGIIQG 733
            GD G   V+E TGVF   E A  HI+ GAK+V+I+AP       P  V G          T  S     TTNCLAP L      +F I++G
Sbjct:   86 GDAGATYVVESTGVFTTIEKASAHIKGGAKRVIISAPSA---DAPMFVMGVNHEKYDNSLTVVSNASC-TTNCLAP-LAKVINDNFVIVEG 171          
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 9.604e-17
Identity = 41/97 (42.27%), Postives = 50/97 (51.55%), Query Frame = 2
Query:  443 PSISPGGDLGIDLVIEGTGVFVEREGAGKHIQAGAKKVLITAPRKG*HPNPTVVGGPMRNALQAR*TPSSEMLLGTTNCLAPFLQGSWTKSFGIIQG 733
            P+  P G   +++VIE +G F   E A  H Q GAKKVLITAP       P  V G    +L+A  T  S     TTNCLAP L       FGI++G
Sbjct:   86 PAEIPWGASNVEVVIESSGAFTTMEKAHLHQQGGAKKVLITAPSA---DAPMFVYGVNHQSLKADQTVFSNASC-TTNCLAP-LTKVINDKFGIVRG 177          

HSP 2 Score: 52.7582 bits (125), Expect = 9.604e-17
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 1
Query:  205 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQA-SHLLKYDSTLGIFEADVKPVGTDG---ISVDGKV--IQVVSNRNPVNLPWG 462
            +V INGFGRIGR  LR    R   P  VV IND      A +++ KYD+  G F   V  VG +G   I+++G V  I V + +NP  +PWG
Sbjct:    4 RVGINGFGRIGRLVLRVLLSR-GMPANVVLINDPFITTDAMAYIFKYDTVHGRFPGTV--VGKEGKLEITLNGHVYDIAVSACKNPAEIPWG 92          
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: E4PD_ENTS8 (D-erythrose-4-phosphate dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=epd PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.623e-16
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 1
Query:  202 LKVAINGFGRIGRNFLRCWH--GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGGL 468
            L+VAINGFGRIGRN +R  +  GR+ + + VVAIN+       +HLLKYD++ G F  DV+  G + + +   VI+++  R+   LPW  L
Sbjct:    3 LRVAINGFGRIGRNVVRALYESGRR-AEISVVAINELADAAGMAHLLKYDTSHGRFAWDVRQEG-EQLWIGNDVIRLLHERDINALPWKAL 91          

HSP 2 Score: 43.1282 bits (100), Expect = 1.623e-16
Identity = 33/93 (35.48%), Postives = 48/93 (51.61%), Query Frame = 2
Query:  455 PGGDLGIDLVIEGTGVFVEREGAGKHIQAGAKKVLITAPRKG*HPNPTVVGGPMRNALQAR*TPSSEMLLGTTNCLAPFLQGSWTKSFGIIQG 733
            P   L +D+V++ TGV+  R     H++AGA+KVL + P  G   + TVV G     L+A     S     TTNC+ P ++     +FGI  G
Sbjct:   87 PWKALDVDVVLDCTGVYGSRADGIAHLEAGARKVLFSHP-GGNDLDATVVYGVNEEELRAEHRIVSNASC-TTNCIIPIIK-LMDDAFGIESG 176          
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: G3P3_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli O157:H7 GN=gapC PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.624e-16
Identity = 41/89 (46.07%), Postives = 50/89 (56.18%), Query Frame = 1
Query:  205 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGGLG 471
            KV INGFGRIGR  LR     K S ++VVAIND    K  ++LLK+DS  G F   V     D + VDGK I V + +   N+PW   G
Sbjct:    3 KVGINGFGRIGRLVLRRLLEVK-SNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSV-DFTEDSLIVDGKSIAVYAEKEAKNIPWKAKG 89          

HSP 2 Score: 45.0542 bits (105), Expect = 1.624e-16
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 2
Query:  470 GIDLVIEGTGVFVEREGAGKHIQAGAKKVLITAPRKG*HPNPTVVGGPMRNALQAR*TPSSEMLLGTTNCLAPFLQGSWTKSFGIIQGNPDHPHPSYTWGNQRLL 784
            G ++++E TG +   E +  H+ AGAKKVLI+AP        T+V     + L    T  S +   TTNCLAP  + +   SFGI  G     H +YT G Q L+
Sbjct:   89 GAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPA---GEMKTIVYKVNDDTLDGNDTIVS-VASCTTNCLAPMAK-ALHDSFGIEVGTMTTIH-AYT-GTQSLV 186          
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: G3P_STREQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equisimilis GN=gap PE=3 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 3.565e-16
Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = 1
Query:  202 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPW 459
            +KV INGFGRIGR   R    +    +EV  IND       +HLLKYD+T G F+  V+ V   G  V+G  I+V + R+P N+ W
Sbjct:    3 VKVGINGFGRIGRLAFR--RIQNVEGVEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVE-VKEGGFEVNGNFIKVSAERDPENIDW 85          

HSP 2 Score: 43.8986 bits (102), Expect = 3.565e-16
Identity = 44/124 (35.48%), Postives = 65/124 (52.42%), Query Frame = 2
Query:  470 GIDLVIEGTGVFVEREGAGKHIQA-GAKKVLITAPRKG*HPNPTVVGGPMRNALQAR*TPS----SEMLLG----TTNCLAPFLQGSWTKSFGIIQGNPDHPHPSYTWGNQRLLPS*PTGNLGG 814
            G+++V+E TG F ++E A K + A GAKKV+ITAP           GG     L +  T S    +E ++     TTNCLAP  + +   +FGI +G     H +YT G+Q ++     G+ GG
Sbjct:   89 GVEIVLEATGFFAKKEAAEKPLHANGAKKVVITAP-----------GGNDVKQLFSTLTTSILDGTETVISGASCTTNCLAPMAK-ALHDAFGIQKGLMTTIH-AYT-GDQMIV----DGHRGG 194          
BLAST of EY665449 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.119e-16
Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  202 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGGLG 471
            +KVAING+GRIGRN LR  + G K   LE+VAIND G     +HL +YD+  G F  +V  V  D   V+G  I+V++ RNP  LPWG LG
Sbjct:    3 IKVAINGYGRIGRNVLRAHYEGGKRHDLEIVAINDLGNAATNAHLTQYDTVHGRFPGEVS-VDGDAFRVNGDRIRVLAQRNPAELPWGELG 92          
The following BLAST results are available for this feature:
BLAST of EY665449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
G3P_CRYNE2.587e-1740.66Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
E4PD_SHEPA2.587e-1735.63D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SHESW3.363e-1735.63D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SHEPC5.683e-1735.63D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
G3P_DANRE5.686e-1741.76Glyceraldehyde-3-phosphate dehydrogenase OS=Danio ... [more]
G3P_MASBA9.604e-1742.27Glyceraldehyde-3-phosphate dehydrogenase OS=Mastig... [more]
E4PD_ENTS81.623e-1642.86D-erythrose-4-phosphate dehydrogenase OS=Enterobac... [more]
G3P3_ECO571.624e-1646.07Glyceraldehyde-3-phosphate dehydrogenase C OS=Esch... [more]
G3P_STREQ3.565e-1643.02Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3PP_RALEH4.119e-1650.55Glyceraldehyde-3-phosphate dehydrogenase, plasmid ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665449 ID=EY665449; Name=EY665449; organism=Citrus sinensis; type=EST; length=850bp
GCTTCGGCCACTCTCTCTGTATCCAAATCAGCTCTTCAGGGAAATGGTAA
GGGATTCTCACAATTCTCAGGTCTACGCAACTCTGCAAGCCTTCCTTTTG
GCAGGAAATCTTCTGATGACTTCCATTCAGTCATTGCTCTCCAGACCTCT
GCTTTAGGAAGCAGCAGCAGCGGGTACAGGAAGGTTGCTGCTCAGGCAAA
GCTGAAGGTTGCAATCAATGGGTTTGGTAGAATTGGTAGGAACTTCTTGA
GGTGCTGGCACGGCCGCAAGGACTCTCCACTTGAAGTCGTTGCCATCAAT
GACACCGGAGGTGTCAAGCAGGCCTCTCACCTCCTCAAGTACGACTCCAC
CCTTGGCATCTTTGAAGCCGATGTTAAACCAGTTGGTACTGATGGCATCT
CTGTTGATGGCAAGGTCATCCAGGTTGTTTCTAACCGCAACCCCGTCAAT
CTCCCCTGGGGGGGACTTGGGCATCGACCTTGTGATTGAAGGGACAGGAG
TGTTTGTAGAAAGAGAGGGTGCGGGCAAGCACATTCAGGCTGGTGCCAAG
AAAGTACTTATTACAGCCCCCCGGAAAGGGTGACATCCCAACCCTACCGT
TGTTGGGGGTCCAATGCGGAATGCTTTACAAGCCAGATGAACCCCATCAT
CAGAAATGCTTCTTGGCACAACCAACTGCCTTGCCCCCTTTCTTCAAGGG
TCTTGGACCAAAAGCTTTGGCATTATTCAGGGAAACCCTGACCACCCACA
CCCCTCCTACACTTGGGGGAACCAAAGGTTACTCCCAAGCTAACCCACCG
GGAACCTAGGGGGAAAAAAAAAAAGCTGCAATCCAAATGTGCCCCAAAAT
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