CX043688

Overview
NameCX043688
Unique NameCX043688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.241e-19
Identity = 47/64 (73.44%), Postives = 52/64 (81.25%), Query Frame = -3
Query:  207 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSN 398
            YRGVR+RPWGK+AAEIRDP K  ARVWLGT+DT E AA AYD+AAF+ RG KAKLNFP  I  N
Sbjct:   70 YRGVRQRPWGKWAAEIRDPNK-AARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHIRVN 132          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.621e-19
Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = -3
Query:  225 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 398
            YRGVRRRPWGK+AAEIRDP K G R+WLGTYDT   A  AYD+AAF++RG KA LNFP
Sbjct:   88 YRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFP 145          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.717e-19
Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = -3
Query:  225 RMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 407
            +  YRGVR+RPWGK+AAEIRDP+K  ARVWLGT++T E AA AYD AA K +GSKAKLNFP
Sbjct:   89 KRHYRGVRQRPWGKWAAEIRDPQK-AARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFP 148          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF094 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.046e-19
Identity = 42/58 (72.41%), Postives = 48/58 (82.76%), Query Frame = -3
Query:  225 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 398
            YRGVR+RPWGKFAAEIRD  + G RVWLGT+DT E AA AYD+AAF ++GS A LNFP
Sbjct:   82 YRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFP 139          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.046e-19
Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = -3
Query:  228 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNF 398
            YRGVRRRPWGKFAAEIRD  +NG RVWLGT+++ E AA AYD+AAF MRGS A LNF
Sbjct:   82 YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNF 138          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.051e-18
Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = -3
Query:  210 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGS 401
            +YRGVR+RPWGK+AAEIRDP K   RVWLGT++T E AA AYD AA + RGSKAKLNFP  +G+
Sbjct:   60 KYRGVRQRPWGKWAAEIRDPHK-ATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGT 122          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.051e-18
Identity = 45/71 (63.38%), Postives = 54/71 (76.06%), Query Frame = -3
Query:  195 RMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEPP 407
            + +YRGVR+RPWGK+AAEIRDP +  ARVWLGT+DT E AA AYD AA + RG+KAKLNFP  +     PP
Sbjct:   74 KRRYRGVRQRPWGKWAAEIRDPHR-AARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPPPP 143          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.372e-18
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = -3
Query:  225 RMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 407
            +  YRGVR RPWGKFAAEIRDP + G RVWLGT++T   AA AYD+ AF++RGSKA LNFP
Sbjct:  134 KRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFP 194          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.372e-18
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = -3
Query:  225 GTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 419
            G   R +YRGVR+RPWGK+AAEIRDP K  ARVWLGT+D  E AA AYD AA + RG+KAKLNFP
Sbjct:  178 GDQPRRRYRGVRQRPWGKWAAEIRDPFK-AARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.792e-18
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = -3
Query:  225 GTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 419
            G      YRGVR+RPWGKFAAEIRD  +NG RVWLGT+D  E AA AYD+AAF  +GS A LNFP
Sbjct:   79 GIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFP 143          
The following BLAST results are available for this feature:
BLAST of CX043688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
EF112_ARATH1.241e-1973.44Ethylene-responsive transcription factor ERF112 OS... [more]
EF104_ARATH1.621e-1974.14Ethylene-responsive transcription factor ERF104 OS... [more]
EF115_ARATH4.717e-1972.13Ethylene-responsive transcription factor ERF115 OS... [more]
ERF94_ARATH8.046e-1972.41Ethylene-responsive transcription factor ERF094 OS... [more]
ERF92_ARATH8.046e-1975.44Ethylene-responsive transcription factor 1B OS=Ara... [more]
RAP26_ARATH1.051e-1868.75Ethylene-responsive transcription factor RAP2-6 OS... [more]
EF110_ARATH1.051e-1863.38Ethylene-responsive transcription factor ERF110 OS... [more]
EF103_ARATH1.372e-1868.85Ethylene-responsive transcription factor 6 OS=Arab... [more]
ABR1_ARATH1.372e-1869.23Ethylene-responsive transcription factor ABR1 OS=A... [more]
ERF93_ARATH1.792e-1866.15Ethylene-responsive transcription factor 15 OS=Ara... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_12G10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G10-M20-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043688 ID=CX043688; Name=CX043688; organism=Citrus sinensis; type=EST; length=598bp
GATTTGAAAAGAAATTATTAAGAAGAAGTACGATTACATGTTATGTAAAT
TTGAATCTAAGAAAATTAAGCAAAGCAGCTCTGATACTAATAATTAATTC
ACCCGGGTCTAAAGGACACAACGGATGATGATGAAGAAAGAGACGAAGAA
GAGGAAGGAGGCTCTGGAGACCCACGCTTCTTGGTAACCCTAACCGGGGG
CTCAACATTTGAGCCAATGAGGTGAGGAAAATTGAGCTTAGCCTTGGAGC
CTCGCATCTTGAAAGCGGCTCTATCATAAGCAAATGCTGCACCCTCAGGG
GTATCATAGGTGCCCAGCCAAACTCTTGCCCCATTCTTCTTAGGGTCCCT
TATCTCCGCAGCAAACTTCCCCCACGGCCTCCTCCTCACGCCTCTATACT
GCATCCTCACGTGAGTCCCACGTGCCACATCCATCTGTGGAGTTGGAAGA
GGAGGAGGATGAGGAGGAGAAGTCATACTCGTATCAATATTTGCTATTGC
ACTTCCNATATCATTATTACGACCAAGCTGATCATCAAACGAAATCCACC
CTCCGTTGACGCCGTCATGTAAGGAGGAGTGCGAGCTAGAGCTAACCC
back to top