EY665438
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS1_BRANA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 4.099e-22 Identity = 71/151 (47.02%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSIT-LIPPAGIPGWKFEVGGAF 479 MASSM+SSA V T S AQA+MVAPFTGLKSSSAFP T+K NNDITSI SNGGRV CMK VWPP G KKFETLSYLP L++ GK + L+ IP +FE+ F Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMK----------------------------------------VWPPVGKKKFETLSYLPDLTEVEL--GKEVDYLLRNKWIPCVEFELEHGF 105
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22 Identity = 71/150 (47.33%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 MASSMISS V T NRA A MVAPFTGLKS + FP T+KTNNDITSIASNGGRVQCM QVWPP G KKFETLSYLP L D A+ L+ IP +FE+ F Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFP-TRKTNNDITSIASNGGRVQCM----------------------------------------QVWPPIGKKKFETLSYLPDLDDAQLAKEVEY-LLRKGWIPCLEFELEHGF 105
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22 Identity = 62/124 (50.00%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDES 401 MASS++S+A A + AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM QVWPP G KKFETLSYLPPLS+ES Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSVSAFPVTRK-NNDITSVASNGGRVQCM----------------------------------------QVWPPLGKKKFETLSYLPPLSEES 83
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22 Identity = 69/150 (46.00%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 MASSM+SSA V T S AQA+MVAPFTGLKSS++FP T+K NNDITSI SNGGRV CMK VWPP G KKFETLSYLP L+D A+ L+ IP +FE+ F Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMK----------------------------------------VWPPIGKKKFETLSYLPDLTDVELAKEVDY-LLRNKWIPCVEFELEHGF 105
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.193e-21 Identity = 67/151 (44.37%), Postives = 83/151 (54.97%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 MASS++SSA AT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM QVWPP +KK+ETLSYLP LSDE + L+ +P +FE F Sbjct: 1 MASSIVSSAAAAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCM----------------------------------------QVWPPINMKKYETLSYLPDLSDEQLL-SEIEYLLKNGWVPCLEFETERGF 108
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS5_MESCR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-5 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.558e-21 Identity = 61/124 (49.19%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDES 401 MASS++S+A A + AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM VWPP G+KKFETLSYLPPLS+ES Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSISAFPVTRK-NNDITSVASNGGRVQCM-----------------------------------------VWPPLGMKKFETLSYLPPLSEES 82
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.558e-21 Identity = 67/150 (44.67%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 MASS++SSA VAT+ A AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM QVWPP G KK+ETLSYLP L+DE + + L+ +P +FE F Sbjct: 1 MASSVMSSAAVATSTNA--AQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCM----------------------------------------QVWPPYGKKKYETLSYLPDLTDEQLLK-EIEYLLNKGWVPCLEFETEHGF 107
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.034e-21 Identity = 69/150 (46.00%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 MASSM SS V T S AQA+MVAPFTGLKSS++FP T+K NNDITSI SNGGRV CMK VWPP G KKFETLSYLP LSD A+ L+ IP +FE+ F Sbjct: 1 MASSMFSSTAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMK----------------------------------------VWPPIGKKKFETLSYLPDLSDVELAKEVDY-LLRNKWIPCVEFELEHGF 105
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.657e-21 Identity = 66/150 (44.00%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 MASS++SSA VAT RA+ AQASMV PFTGLKS+++FP ++K N DITSIASNGGRV+CM QVWPP +KK+ETLSYLP LSDE + L+ +P +FE F Sbjct: 1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCM----------------------------------------QVWPPINMKKYETLSYLPDLSDEQLLKEVEY-LLKNGWVPCLEFETEHGF 107
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.657e-21 Identity = 70/150 (46.67%), Postives = 76/150 (50.67%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 MASSMISS V T NRA A MVAPFTGLKS + P T+KTNNDITSIASNGGRVQCM QVWPP G KKFETLSYLP L D A+ L+ IP +FE+ F Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGLP-TRKTNNDITSIASNGGRVQCM----------------------------------------QVWPPVGKKKFETLSYLPDLDDAQLAKEVEY-LLRKGWIPCLEFELEHGF 105 The following BLAST results are available for this feature:
BLAST of EY665438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665438 ID=EY665438; Name=EY665438; organism=Citrus sinensis; type=EST; length=885bpback to top |