EY665438
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS5_FLAPR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Flaveria pringlei GN=RBCS5 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.339e-15 Identity = 53/137 (38.69%), Postives = 70/137 (51.09%), Query Frame = 3 Query: 69 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 A A++AQA+MVAPFTGLKS++AFP TKK ND +++ SNGGRVQCMK VWPP G K++ETLSYLP L++ A+ L+ +P +FE+ F Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKV-NDFSTLPSNGGRVQCMK----------------------------------------VWPPLGKKRYETLSYLPNLTEVQLAKEVDY-LLRNKWVPCLEFELEHGF 100
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS6_FLAPR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Flaveria pringlei GN=RBCS6 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14 Identity = 52/137 (37.96%), Postives = 69/137 (50.36%), Query Frame = 3 Query: 69 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 A A++AQA+MVAPFTGLK+++AFP TKK ND +++ SNGGRVQCMK VWPP G KK+ TLSYLP L++ A+ L+ +P +FE+ F Sbjct: 6 ATVAAVAQANMVAPFTGLKANAAFPVTKKV-NDFSTLPSNGGRVQCMK----------------------------------------VWPPLGKKKYXTLSYLPNLTEAQLAKEVDY-LLRNKWVPCLEFELEHGF 100
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS_FLATR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Flaveria trinervia GN=RBCS PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13 Identity = 50/137 (36.50%), Postives = 67/137 (48.91%), Query Frame = 3 Query: 69 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQGKSITLIPPAGIPGWKFEVGGAF 479 A A++ Q +MVAPFTGLK+++AFP TKK N +++ SNGGRVQCMK VWPP G KK+ETLSYLP L++ A+ L+ +P +FE+ F Sbjct: 6 ATVAAVPQTNMVAPFTGLKANAAFPVTKKVNG-FSTLPSNGGRVQCMK----------------------------------------VWPPVGKKKYETLSYLPELTEAQLAKEVDY-LLRNKWVPCLEFELEHGF 100
BLAST of EY665438 vs. ExPASy Swiss-Prot
Match: RBS_ZANAE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.039e-13 Identity = 52/127 (40.94%), Postives = 62/127 (48.82%), Query Frame = 3 Query: 30 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVXXXXXQEFISSFACLN*RXXXXXXXXXXXXXXXXACMLQVWPPTGLKKFETLSYLPPLSDESFAQ 410 MASSM+ S A +R S AQ++MV PF GL SS+AFP T+K D + + SNG RV+CM QVWPP G KKFETLSYLPPL+ E Q Sbjct: 1 MASSMMVST--AAVSRTSPAQSNMVVPFAGLHSSAAFPVTRKF-ADSSKLPSNGLRVRCM----------------------------------------QVWPPEGKKKFETLSYLPPLTREQLGQ 84 The following BLAST results are available for this feature:
BLAST of EY665438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665438 ID=EY665438; Name=EY665438; organism=Citrus sinensis; type=EST; length=885bpback to top |