EY665430

Overview
NameEY665430
Unique NameEY665430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1108
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665430 vs. ExPASy Swiss-Prot
Match: BGA15_ARATH (Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.024e-12
Identity = 57/150 (38.00%), Postives = 72/150 (48.00%), Query Frame = 1
Query:    7 VLRVFINGQLTGSVIG-----HWVKVVQPVEFQSGYNDLILLSQTVGLQNYGAFLEKDGAGFRGQVKLTGFKNGD----IDLSKILWTYQVGLKGEFQQIYGIEENEAEWTDLTRDGIPSTFTWYKTYFDAPXWIXPVALDLGSMGKGQA 429
            VL  F+NGQ  G+        H+V   Q  +F  G N + LLS TVGL NYGAF E   AG  G V + G +NGD     DLS   W+Y+ GL G   Q++  E              PST++       AP    PV +DL  +GKG A
Sbjct:  500 VLHAFVNGQHIGNYRVENGKFHYV-FEQDAKFNPGANVITLLSITVGLPNYGAFFENFSAGITGPVFIIG-RNGDETIVKDLSTHKWSYKTGLSGFENQLFSSES-------------PSTWS-------APLGSEPVVVDLLGLGKGTA 627          

HSP 2 Score: 23.483 bits (49), Expect = 1.024e-12
Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  431 WVNGHHIRRFW 463
            W+NG++I R+W
Sbjct:  628 WINGNNIGRYW 638          
BLAST of EY665430 vs. ExPASy Swiss-Prot
Match: BGAL7_ORYSJ (Beta-galactosidase 7 OS=Oryza sativa subsp. japonica GN=Os05g0428100 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.910e-12
Identity = 62/203 (30.54%), Postives = 88/203 (43.35%), Query Frame = 1
Query:    7 VLRVFINGQLTGSVIGHW-----VKVVQPVEFQSGYNDLILLSQTVGLQNYGAFLEKDGAGFRGQVKLTGFKNGDID---LSKILWTYQVGLKGEFQQIYGIE-ENEAEWTDLTRDGIPSTFTWYKTYFDAPXWIXPVALDLGSMGKGQALGQWAPYKKILDCGCPERWMSRYL*LP*NLHFRKCTTNCGNPTQTWYLVPRSW 588
            +L  F+N +  GSV G       + +   +  + G N + LLS  VG  + GA++E+   G    ++  G + G      L+  LW YQVGL GE   IY  E  N   W D+  + I    TWYKT F  P     V L+L SMGKG+    W   + I        W+S                  G P+Q+ Y +PR +
Sbjct:  467 ILHAFVNNEYVGSVHGSHDGPRNIVLNTHMSLKEGDNTISLLSVMVGSPDSGAYMERRTFG----IQTVGIQQGQQPMHLLNNDLWGYQVGLFGEKDSIYTQEGTNSVRWMDIN-NLIYHPLTWYKTTFSTPPGNDAVTLNLTSMGKGEV---WVNGESI-----GRYWVS-------------FKAPSGQPSQSLYHIPRGF 643          

HSP 2 Score: 21.1718 bits (43), Expect = 2.910e-12
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  606 LLVLFEENGGNRLKI 650
            LLVL EE GG+ L+I
Sbjct:  650 LLVLVEEMGGDPLQI 664          
BLAST of EY665430 vs. ExPASy Swiss-Prot
Match: BGA11_ORYSJ (Beta-galactosidase 11 OS=Oryza sativa subsp. japonica GN=Os08g0549200 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.043e-11
Identity = 53/170 (31.18%), Postives = 82/170 (48.24%), Query Frame = 1
Query:   19 FINGQLTGSVIGHWVKV------VQPVEFQSGYNDLILLSQTVGLQNYGAFLEKDGAGFRGQVKLTGFKNGDIDLSKILWTYQVGLKGEFQQIYGIEENEAEWTDLTRDGIPSTFTWYKTYFDAPXWIXPVALDLGSMGK------GQALGQ-WAPYKKILDCGCPERWM 489
            F+N    G   GH  K+       + ++ + G N + +LS T+GL + G++LE   AG    V + G   G +DL+   W + VGL GE ++++  +   A      +D  P   TWY+  FD P    PV +DL  MGK      G+ LG+ W  Y   L  G P +++
Sbjct:  516 FVNDAFVGC--GHGTKINKAFTMEKAMDLKVGVNHVAILSSTLGLMDSGSYLEHRMAGVY-TVTIRGLNTGTLDLTTNGWGHVVGLDGERRRVHSEQGMGAVAWKPGKDNQP--LTWYRRRFDPPSGTDPVVIDLTPMGKGFLFVNGEGLGRYWVSYHHAL--GKPSQYL 678          
The following BLAST results are available for this feature:
BLAST of EY665430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
BGA15_ARATH1.024e-1238.00Beta-galactosidase 15 OS=Arabidopsis thaliana GN=B... [more]
BGAL7_ORYSJ2.910e-1230.54Beta-galactosidase 7 OS=Oryza sativa subsp. japoni... [more]
BGA11_ORYSJ2.043e-1131.18Beta-galactosidase 11 OS=Oryza sativa subsp. japon... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665430 ID=EY665430; Name=EY665430; organism=Citrus sinensis; type=EST; length=1108bp
CGTGATGTGTTGCGTGTATTCATTAATGGCCAGCTTACAGGCAGTGTGAT
TGGTCATTGGGTCAAGGTGGTGCAGCCAGTTGAGTTTCAGTCAGGATACA
ATGATTTAATCTTGTTATCTCAGACTGTTGGTTTGCAGAATTATGGTGCC
TTCCTTGAGAAAGATGGGGCTGGTTTTAGAGGCCAAGTTAAGCTTACTGG
ATTTAAAAATGGGGATATAGACCTTTCAAAGATATTATGGACATACCAGG
TTGGTCTTAAGGGTGAGTTCCAGCAGATATACGGTATAGAAGAAAATGAG
GCAGAATGGACTGATTTGACACGTGATGGTATTCCATCCACCTTCACCTG
GTACAAGACATATTTTGACGCTCCTGNATGGATAGANCCAGTGGCTCTCG
ATTTGGGAAGCATGGGAAAGGGCCAGGCTTTGGGTCAATGGGCACCATAT
AAGAAGATTCTGGACTGTGGTTGCCCCGAAAGGTGGATGTCAAGATACTT
GTGATTACCGTGAAACTTACATTTCCGAAAGTGCACTACAAACTGTGGGA
ACCCTACTCAAACCTGGTACCTTGTGCCACGGTCATGGTGGCAAGCTTAA
AATATTTACTCGTCCTCTTTGAAGAAAACGGAGGCAATCGTTTGAAAATC
CGTCAAGGTGCTTTCCACTCAAATTGCCGGGAACAATTTTCAAACCCCCT
CCCCCCTGGTAAGGAGGGTCCATTTCATTTTTGTGGGGGAAAATTTCCAA
AAAAAAAGGGGGCCCAAAAAGCTTTTGTTTGTCAAAAGGAAATTATTTCT
TTCACAAAAATTTGTAAATTGGGACCCCCGGGGCGCCCCCAAAAATTTTC
GGGGAGACCGGCGGGCCCCTGTTATTTTCGGGGGGTGTAGGGTTGCCAAG
GAAATAGTTTTTCCATAAATTAAAGGTGGGTTTGGGGGGGACCTCCCCGC
GTTTGGAAAATAATGATGGGAAAAGACCCCCCCCTAGACGGTTTTTCAAA
TATAAGAAACACCCAAAATGAGGGGATAAAAACTTTATAAAACAATATTT
TTATTGCTGCTTTTTCCCGCACCCGGGGTGGTGTTATTTTTTCGGGCGCT
TTGATTTG
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