EY665428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 3.600e-20 Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 28 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 378 MV AVAV+ + G GT F+ G PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F I K IPL+G S+IGR +VVH+ P D G G Sbjct: 1 MVKAVAVLNSSEGVSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPD-DLGKG 128
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODC1_BRAJU (Superoxide dismutase [Cu-Zn] 1 OS=Brassica juncea GN=SODCC1 PE=2 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 4.702e-20 Identity = 61/150 (40.67%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 28 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 402 M V V+ + G KGT+ F+ EG+G TTV G++SGL PG H +H G+ +N +STGP F P G G L NITV +G ATF I + IPL G NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MGKGVRVLNSSEGVKGTIFFTQEGNGTTTVTGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPEGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDSQIPLDGPNSIVGRAVVVHAEPDDLGKGGHELSLTTGNAGGRVACGIIGL 150
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 6.141e-20 Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 28 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 378 ++ AV V+ G KG V F+ EG GPTTV G +SGL PG H +H G+ +N +STGP F P G + G L N+TV ++G F I + IPLSG +S++GR +VVH+ P D G G Sbjct: 3 LLKAVVVLNGAADVKGVVQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMSTGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVVHADPD-DLGKG 130
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 6.141e-20 Identity = 61/150 (40.67%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 28 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYK-TIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 402 M VAV+ + G GT+ F+ EG G TTV G++SGL PG H +H G+ +N +STGP F P G G L NITV +G ATF I IPL+G NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGL 150
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 6.141e-20 Identity = 62/150 (41.33%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 28 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYK-TIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 402 M VAV+ + G KGT+ F+ EG G TTV G++SGL PG H +H G+ +N +STGP F P G G L NI V +G ATF I IPLSG NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MGKGVAVLNSSEGVKGTIFFAQEGEGKTTVTGTVSGLKPGLHGFHVHALGDTTNGSMSTGPHFNPDGKQHGAPEDANRHAGDLGNIIVGDDGTATFTITDCQIPLSGPNSIVGRAVVVHADPDVLGKGGHELSLTTGNAGGRVACGIIGL 150
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.199e-19 Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 28 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 378 MV AVAV+ + G GT+ F+ EG+GPTTV GSL+GL PG H +H G+ +N +STG F P + G L N+ V +G +F I + IPL+G NS+IGR +VVH+ S D G G Sbjct: 1 MVKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHAD-SDDLGKG 128
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.184e-17 Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 37 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 405 AVAV+ GT+ +G V+ S E GPTTV ++GL PG+H +H +G+ +N +STG F P G G L NI +EG+A I T IPLSG N+VIGR LVVH S + + G +A G +GL+ Sbjct: 63 AVAVLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 210
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.416e-16 Identity = 57/148 (38.51%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 37 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 405 AVAV+ GT+ +G V+ + E GPTTV +SGL PG H +H +G+ +N +STGP F P GA G L NI ++G+A I IPL+G NSV+GR LVVH S + + G +A G +GL+ Sbjct: 73 AVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGLT 220
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.416e-16 Identity = 58/160 (36.25%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 1 KGVVISHSTMVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 405 + +V++ +T AVAV+ GT+ +G V+ + + GPTTV ++GL PG H +H +G+ +N ISTGP F P G L NI +EG+A I K IPLSG NSV+GR VVH S + + G +A G +GL+ Sbjct: 51 RALVVADATK-KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLT 209
BLAST of EY665428 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.849e-16 Identity = 55/148 (37.16%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 37 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 405 AVAV+ GT+ +G V+ + + GPTTVK ++GL PG H +H +G+ +N +STGP F P G G L NI + G+A + IPLSG NSV+GR LVVH S + + G +A G +GL+ Sbjct: 70 AVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 217 The following BLAST results are available for this feature:
BLAST of EY665428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665428 ID=EY665428; Name=EY665428; organism=Citrus sinensis; type=EST; length=1015bpback to top |