CX043276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_FRATW (Tryptophan synthase beta chain OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=trpB PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 109/221 (49.32%), Postives = 160/221 (72.40%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAK-VVVNCSGGGDKDVDTV 803 K+A +EA+R+W N K++YL GT GPHP P +VREFQ +IG+ET++Q + K G PD ++ACVG GSNA+G+F +FI++++V+LIGVE AG G+++G+H A L G+ G++ G + L+Q+ +GQI ++S+ GL++P VGP+ + L RA++ +ATD EA+ A++ LC+ EGI PALE+SHALA KL PN + +VVN SG GDKD+ TV Sbjct: 166 KDACNEALRDWSANYSKAHYLLGTAAGPHPFPTIVREFQRMIGEETKQQMLAKEGRLPDAVIACVGGGSNAIGMFADFIDEKNVKLIGVEPAGKGIETGEHGAPLKHGKTGIFFGMKAPLMQNSDGQIEESYSISAGLDFPSVGPQHAHLLAICRAKYASATDDEALDAFKLLCKKEGIIPALESSHALAHALKLAYEDPNKEQLLVVNLSGRGDKDIFTV 386
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_ELUMP (Tryptophan synthase beta chain OS=Elusimicrobium minutum (strain Pei191) GN=trpB PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 112/222 (50.45%), Postives = 153/222 (68.92%), Query Frame = -1 Query: 138 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVN 803 KEA A +++ + E Y G+VVGPHP P+MV FQSI+GKE R+Q +E+ G PD ++ACVG GSN++G+F F D+ V+L GVE AG GL++G HAA LAKG VGV HG Y +QD++G +GTHSV GL+Y GVGP+ +L+D+GR + +A D EAV A+ L R EGI PALE++HA+A+ KL L ++VN SG G+KD+D V++ Sbjct: 181 KEAVDAAFDDYLKDPETQMYAIGSVVGPHPFPLMVASFQSIVGKEAREQFLEQEGRLPDNVVACVGGGSNSMGIFSGFFADKTVKLTGVEPAGKGLETGLHAAPLAKGRVGVVHGFKCYFMQDDKGNPMGTHSVASGLDYLGVGPQHCYLKDSGRVTYRSACDDEAVDAFFMLSRKEGIIPALESAHAVAYALKLSKELGKDKSILVNLSGRGEKDLDYVLS 402
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_ACTP7 (Tryptophan synthase beta chain OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=trpB PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 109/221 (49.32%), Postives = 157/221 (71.04%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAK-VVVNCSGGGDKDVDTV 803 K+A EA+R+W N E ++YL GT GPHP P MVREFQ +IG+ET++Q +EK PD ++A VG GSNA+G+F FI ++ V+LIGVE AG G+++G+H A L G G+Y G S ++Q ++GQI ++S+ GL++P VGP+ ++L +GRA++ + TD+EA+ A+Q L + EGI PALE+SHALA+ KL P+ + +VVN SG GDKD+ TV Sbjct: 168 KDACCEAMRDWAANYETTHYLIGTAAGPHPFPTMVREFQKMIGEETKRQILEKENRLPDAVIAAVGGGSNAIGMFAGFIEEKSVQLIGVEPAGKGIETGEHGAPLKHGTTGIYFGMKSPIMQTKDGQIEESYSISAGLDFPSVGPQHAYLNASGRADYVSITDKEALDAFQALAQHEGIIPALESSHALAYALKLIAQNPDKEQLLVVNLSGRGDKDIFTV 388
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_ACIBL (Tryptophan synthase beta chain OS=Acidobacteria bacterium (strain Ellin345) GN=trpB PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/217 (50.69%), Postives = 147/217 (67.74%), Query Frame = -1 Query: 153 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDV 803 K+A +EA+R+WV N+ ++YL G+V+G HP P+MVR+F +I +E + Q M+ G P ++ACVG GSNA+G F+EFI D+ V+LIGVEA G G G+HAA G GV G SY+LQDE GQI GTHSV GL+YP +GPE + L + GRAE+ A+D EA+ A L + EGI PALE+SHA+A + P + V+VN SG GDKD+ Sbjct: 183 KDAINEAMRDWVTNVRTTHYLLGSVLGAHPYPMMVRDFHRVISREAKAQIMKAEGKLPTAIIACVGGGSNAIGAFYEFIGDKKVQLIGVEAGGRGKALGEHAARFRGGAPGVLQGTYSYVLQDEHGQIAGTHSVSAGLDYPAIGPEHAALAEAGRAEYVAASDAEALAACSMLAKTEGIIPALESSHAVAECVRRAPQMRKSDVVIVNISGRGDKDI 399
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_STRT1 (Tryptophan synthase beta chain OS=Streptococcus thermophilus (strain CNRZ 1066) GN=trpB PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 7.049e-58 Identity = 105/218 (48.17%), Postives = 153/218 (70.18%), Query Frame = -1 Query: 153 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGK-PDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDV 803 K+A + A+R WV +E ++Y+ G+ +GP P P +VR+FQS+IG+E ++Q E GGK PD ++AC+G GSNA+G+F+ F+ND+ V + G EA+G GLD+ KHAAT AKG G+ HGA+ +LQD GQI+ S+ GL+YPGVGPE + + GRA + + TD+EA++ ++ L LEGI PALE+SHA+A +K+ + ++V SG GDKDV Sbjct: 171 KDAVNAALRAWVAGIEDTHYIMGSALGPAPFPEIVRDFQSVIGREAKRQYAEISGGKLPDAVMACIGGGSNAIGMFYPFVNDKSVAMYGAEASGLGLDTEKHAATFAKGRPGILHGALMDVLQDAHGQIMEAFSISAGLDYPGVGPEHCYFNEIGRATYDSITDEEALEGFKLLSCLEGIIPALESSHAIALAQKVAAKMSPDQSLIVCLSGRGDKDV 388
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PSYIN (Tryptophan synthase beta chain OS=Psychromonas ingrahamii (strain 37) GN=trpB PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 7.049e-58 Identity = 105/220 (47.73%), Postives = 153/220 (69.55%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 803 K+A +EA+R+W G+ + ++YL GTV GPHP P +VREFQ IIG+E ++Q ++K G PD ++ACVG GSNA+G+F++FI+D V LIGVE G G+++GKH + G G++ G S ++QD+ GQ+ ++S+ GL++P VGP+ + L +TGRA++ ATD EA+ A+ L EGI PALE++HALA KL ++VN SG GDKD+ TV Sbjct: 166 KDACNEALRDWAGSYDTAHYLLGTVAGPHPFPTIVREFQKIIGEEAKQQVLKKEGVLPDKVIACVGGGSNAIGIFNDFIDDPSVELIGVEPGGRGIETGKHGCPITYGSKGIFFGMHSLMMQDKHGQVKESYSISAGLDFPSVGPQHAHLAETGRAQYVYATDDEALDAFHELSLKEGIIPALESAHALAHALKLIKHDDKEQIIIVNLSGRGDKDIFTV 385
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BUCMH (Tryptophan synthase beta chain OS=Buchnera aphidicola subsp. Melaphis rhois GN=trpB PE=3 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 9.207e-58 Identity = 109/227 (48.02%), Postives = 155/227 (68.28%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKV-VVNCSGGGDKDVDTVVNY 812 G K+A +EA+R+W N ++Y+ GT GPHP P +V+EFQSIIGKET++Q + + P+ ++ACVG GSNA+G+F FI+D V LIGVE G G+ + KH A L GE G++ G + ++Q EEGQI + S+ GL++P VGPE ++L T RA++ + TD EAV A++ L + EGI PALE+SHALA+ KL P ++ +VN SG GDKD++TV N+ Sbjct: 163 GTLKDACNEALRDWSENYINAHYMLGTAAGPHPYPTIVKEFQSIIGKETKRQIVREENCLPNAVIACVGGGSNAIGIFSSFISDNSVSLIGVEPGGKGIHTNKHGAPLTHGETGIFFGMKTKIMQTEEGQIKESWSISAGLDFPAVGPEHAWLYSTKRAQYVSITDHEAVNAFRCLSKSEGIIPALESSHALAYALKLMNNHPQKNQILIVNISGRGDKDIETVKNF 389
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_VIBFM (Tryptophan synthase beta chain OS=Vibrio fischeri (strain MJ11) GN=trpB PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.202e-57 Identity = 110/221 (49.77%), Postives = 154/221 (69.68%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAK-VVVNCSGGGDKDVDTV 803 K+A +EA+R+W E ++YL GT GPHP P +VREFQ +IG+ET+ Q + + G PD ++ACVG GSNA+G+F +FI +E V+LIGVE AG G+D+ +H A L G+ G++ G + L+QDE GQI ++SV GL++P VGP+ + L GRAE+ TD EA++A++ L R EGI PALE+SHALA+ +L P + +VVN SG GDKD+ TV Sbjct: 166 KDACNEALRDWSATYETAHYLLGTAAGPHPFPTIVREFQRMIGEETKMQILAREGRLPDAVIACVGGGSNAIGMFADFIEEESVKLIGVEPAGKGIDTDQHGAPLKHGKTGIFFGMKAPLMQDEHGQIEESYSVSAGLDFPSVGPQHAHLNAIGRAEYGAVTDDEALEAFKILARNEGIIPALESSHALAYALQLAQAEPEKEQLLVVNLSGRGDKDIFTV 386
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_SODGM (Tryptophan synthase beta chain OS=Sodalis glossinidius (strain morsitans) GN=trpB PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.570e-57 Identity = 108/221 (48.87%), Postives = 155/221 (70.14%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKV-VVNCSGGGDKDVDTV 803 K+A +EA+R+W + E+++Y+ GT GPHP P +VREFQ +IG+ETR Q E PD ++ACVG GSNA+G+F +FI++ VRLIGVE G G+++ +H A+L G G+Y G S ++Q EGQI ++S+ GL++P VGP+ ++L GRAE+ +ATD+EA+ A++RL R EGI PALE+SHALA ++ P ++ VVN SG GDKD+ TV Sbjct: 166 KDACNEALRDWSDSYERAHYMLGTAAGPHPFPTIVREFQRMIGEETRAQLQEHEQRLPDAVIACVGGGSNAIGMFADFIDEPAVRLIGVEPGGLGIETRQHGASLKHGRTGIYFGMKSPMMQSAEGQIEESYSISAGLDFPSVGPQHAYLDSIGRAEYISATDEEALDAFRRLSRHEGIIPALESSHALAHALRMIQAEPEKEQILVVNLSGRGDKDIFTV 386
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_HAES2 (Tryptophan synthase beta chain OS=Haemophilus somnus (strain 2336) GN=trpB PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.570e-57 Identity = 109/221 (49.32%), Postives = 154/221 (69.68%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAK-VVVNCSGGGDKDVDTV 803 K+A EA+R+W N E ++YL GT GPHP P +VREFQ +IG+ET+ Q + K PD ++A VG GSNA+G+F EFI ++ V+LIG+E AG G+ +GKH A L G +G+Y G S ++Q ++GQI ++S+ GL++P VGPE ++L GRA++ + TD EA++A+Q L + EGI PALE+SHALA+ KL P + +VVN SG GDKD+ TV Sbjct: 168 KDACCEAMRDWSANYETTHYLLGTAAGPHPFPTIVREFQKMIGEETKCQILAKENRLPDAVIAAVGGGSNAIGMFAEFIAEKSVQLIGIEPAGNGIHTGKHGAPLRHGSIGIYFGMKSPIMQTQDGQIEESYSISAGLDFPSVGPEHAYLHTIGRAQYESITDDEAIEAFQALAKHEGIIPALESSHALAYALKLIVQNPEKEQLLVVNLSGRGDKDIFTV 388 The following BLAST results are available for this feature:
BLAST of CX043276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043276 ID=CX043276; Name=CX043276; organism=Citrus sinensis; type=EST; length=821bpback to top |