CX043276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_LEPCP (Tryptophan synthase beta chain OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=trpB PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.674e-67 Identity = 124/222 (55.86%), Postives = 162/222 (72.97%), Query Frame = -1 Query: 138 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVN 803 K+A +EA+R+WV N+E ++Y+ GTV GPHP P MVR+FQ +IG E Q G +PD ++ACVG GSNA+G+F+ +I E VRLIGVEAAG G++SGKH+A+L +G GV HG +Y+LQD GQI THSV GL+YPGVGPE ++L+D GRAE+ TD EA+QA+ LCR EGI PALE+SHA+A+ KL T+ V+VN SG GDKD+ TV + Sbjct: 172 KDALNEAMRDWVTNVENTFYIIGTVAGPHPYPAMVRDFQRVIGDECLVQMPALAGRQPDAVVACVGGGSNAMGIFYPYIPHEGVRLIGVEAAGEGMESGKHSASLQRGSPGVLHGNRTYVLQDANGQITETHSVSAGLDYPGVGPEHAYLKDIGRAEYVGITDAEALQAFHYLCRAEGIIPALESSHAVAYAMKLAKTMRPDQHVLVNLSGRGDKDIGTVAD 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_LISMH (Tryptophan synthase beta chain OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=trpB PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.186e-67 Identity = 121/218 (55.50%), Postives = 165/218 (75.69%), Query Frame = -1 Query: 150 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVD 803 K+A +EA+R WV N+E ++Y+ G+V+GPHP P +VR++QS+IG E RKQ +EK G PD ++ACVG GSNA+GLF+ F++D V++ GVEAAG GL++ HAAT++KGE+G+ HGAM +LQDE GQIL S+ GL+YPG+GPE SF RD GRA +++ TD EAV+A+Q LCR EGI PALE+SHA+++ KL + +VV SG GDKDV+ Sbjct: 171 KDAVNEALRFWVANVEDTHYIMGSVLGPHPFPEIVRDYQSVIGIEARKQHLEKEGKLPDAIVACVGGGSNAMGLFYPFVDDVSVQMHGVEAAGHGLETEFHAATISKGEIGILHGAMMDVLQDENGQILEAFSISAGLDYPGIGPEHSFFRDLGRAAYHSVTDDEAVEAFQLLCRTEGIIPALESSHAISYAVKLASQMRPEESMVVCLSGRGDKDVN 388
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_LISMF (Tryptophan synthase beta chain OS=Listeria monocytogenes serotype 4b (strain F2365) GN=trpB PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.186e-67 Identity = 121/218 (55.50%), Postives = 165/218 (75.69%), Query Frame = -1 Query: 150 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVD 803 K+A +EA+R WV N+E ++Y+ G+V+GPHP P +VR++QS+IG E RKQ +EK G PD ++ACVG GSNA+GLF+ F++D V++ GVEAAG GL++ HAAT++KGE+G+ HGAM +LQDE GQIL S+ GL+YPG+GPE SF RD GRA +++ TD EAV+A+Q LCR EGI PALE+SHA+++ KL + +VV SG GDKDV+ Sbjct: 171 KDAVNEALRFWVANVEDTHYIMGSVLGPHPFPEIVRDYQSVIGIEARKQHLEKEGKLPDAIVACVGGGSNAMGLFYPFVDDVSVQMHGVEAAGHGLETEFHAATISKGEIGILHGAMMDVLQDENGQILEAFSISAGLDYPGIGPEHSFFRDLGRAAYHSVTDDEAVEAFQLLCRTEGIIPALESSHAISYAVKLASQMRPEESMVVCLSGRGDKDVN 388
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_LISMC (Tryptophan synthase beta chain OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=trpB PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.186e-67 Identity = 121/218 (55.50%), Postives = 165/218 (75.69%), Query Frame = -1 Query: 150 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVD 803 K+A +EA+R WV N+E ++Y+ G+V+GPHP P +VR++QS+IG E RKQ +EK G PD ++ACVG GSNA+GLF+ F++D V++ GVEAAG GL++ HAAT++KGE+G+ HGAM +LQDE GQIL S+ GL+YPG+GPE SF RD GRA +++ TD EAV+A+Q LCR EGI PALE+SHA+++ KL + +VV SG GDKDV+ Sbjct: 171 KDAVNEALRFWVANVEDTHYIMGSVLGPHPFPEIVRDYQSVIGIEARKQHLEKEGKLPDAIVACVGGGSNAMGLFYPFVDDVSVQMHGVEAAGHGLETEFHAATISKGEIGILHGAMMDVLQDENGQILEAFSISAGLDYPGIGPEHSFFRDLGRAAYHSVTDDEAVEAFQLLCRTEGIIPALESSHAISYAVKLASQMRPEESMVVCLSGRGDKDVN 388
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_CLOAB (Tryptophan synthase beta chain OS=Clostridium acetobutylicum GN=trpB PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.186e-67 Identity = 119/221 (53.85%), Postives = 167/221 (75.57%), Query Frame = -1 Query: 141 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVV 803 K+A + A+R+WV N++ +YY+ G+V+GPHP P +V++FQ IIG+E RKQ ++ G PD ++ACVG GSN++G+F+ FI DE V+LIGVEAAG G+D+ HAATL KG VG+ HG M+Y+LQDE+GQI +SV GL+YPGVGP+ S+L++ RA + TD+EA++A+ L EGI PALE+SHA+A+ KL P+L V++N SG GDKDV+TV+ Sbjct: 164 KDAINAAMRDWVTNIDNTYYVIGSVMGPHPYPTIVKDFQKIIGEEARKQILKAEGRLPDYVVACVGGGSNSMGIFYPFIKDEGVKLIGVEAAGLGIDTPMHAATLTKGSVGIIHGMMTYVLQDEDGQITPAYSVSAGLDYPGVGPQHSYLKEKERASYEAVTDKEALKAFLYLSEKEGIIPALESSHAVAYAMKLAPSLSKDEIVIINLSGRGDKDVNTVM 384
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BORPD (Tryptophan synthase beta chain OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=trpB PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.186e-67 Identity = 121/220 (55.00%), Postives = 167/220 (75.91%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 803 K+A +EA+R+WV N+E ++Y+ GTV GP P P MVR+FQ++IG E +Q + G +PD ++A VG GSNA+G+F+ +I E+VRLIGVEAAG GLDSG+HAA+LA G+VGV HG +Y++Q+ +GQ+ THSV GL+YPGVGPE ++L+D+GRA++ TD EA+ A+ CR+EGI PALE+SHA+A K+ PTLP ++VN SG GDKD+ TV Sbjct: 172 KDALNEAMRDWVTNIENTFYIIGTVAGPDPYPRMVRDFQTVIGNECLEQMPQDAGRQPDYVVASVGGGSNAMGIFYPYIPHENVRLIGVEAAGEGLDSGRHAASLAAGQVGVLHGNRTYVMQNADGQVQETHSVSAGLDYPGVGPEHAWLKDSGRAQYVGITDDEALAAFHDCCRIEGIMPALESSHAIAQAVKMAPTLPKDTIILVNLSGRGDKDMHTV 391
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_HELPY (Tryptophan synthase beta chain OS=Helicobacter pylori GN=trpB PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.855e-67 Identity = 119/222 (53.60%), Postives = 164/222 (73.87%), Query Frame = -1 Query: 138 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVN 803 K+A +EA+R+W + + ++YL GT GPHP P MV+ FQ +IG E + Q +EK PD ++ACVG GSNA+G+F F+ND++V+LIGVE AG GL++ KH ATL KG VG+ HG +YLLQD+EGQI +HS+ GL+YPGVGPE S+L+++GRA + +A+D EA++A++ LC+ EGI PALE+SHALA+ KL + +VVN SG GDKD+ TV N Sbjct: 165 KDAVNEALRDWASSYKDTHYLLGTAAGPHPYPTMVKTFQKMIGDEVKSQILEKENRLPDYVIACVGGGSNAIGIFSAFLNDKEVKLIGVEPAGLGLETNKHGATLNKGRVGILHGNKTYLLQDDEGQIAESHSISAGLDYPGVGPEHSYLKESGRAVYESASDAEALEAFKLLCQKEGIIPALESSHALAYALKLAQKCEEESIIVVNLSGRGDKDLSTVYN 386
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACCR (Tryptophan synthase beta chain OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=trpB PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.855e-67 Identity = 120/229 (52.40%), Postives = 168/229 (73.36%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD+EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDEEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKKDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACC4 (Tryptophan synthase beta chain OS=Bacillus cereus (strain B4264) GN=trpB PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.855e-67 Identity = 120/229 (52.40%), Postives = 168/229 (73.36%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD+EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDEEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKKDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PSE14 (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpB PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.729e-67 Identity = 123/226 (54.42%), Postives = 161/226 (71.24%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A +EA+R+WV N++ ++YL GTV GPHP P MVR+FQ+IIGKET++Q EK G PD L+ACVG GSNA+GLFH F++D V +IGVEA G G+D+ KHAA+L G GV HG +YLLQD +GQI HS+ GL+YPG+GPE +FL + R E+ + TD EA+ A+ + C LEGI PALE +HALA K L + +VV SG GDKD+ TV+N+ Sbjct: 172 GTLKDAMNEALRDWVTNVDDTFYLIGTVAGPHPYPAMVRDFQAIIGKETKEQMQEKEGRLPDSLIACVGGGSNAMGLFHPFLDDASVEIIGVEAGGHGVDTDKHAASLNGGVPGVLHGNRTYLLQDGDGQITDAHSISAGLDYPGIGPEHAFLHEVKRVEYVSITDDEALDAFHQCCLLEGIIPALETAHALAEAMKRATNLRDDHLMVVCLSGRGDKDMQTVMNH 397 The following BLAST results are available for this feature:
BLAST of CX043276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043276 ID=CX043276; Name=CX043276; organism=Citrus sinensis; type=EST; length=821bpback to top |