CX043276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB1_THEMA (Tryptophan synthase beta chain 1 OS=Thermotoga maritima GN=trpB1 PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.729e-67 Identity = 124/225 (55.11%), Postives = 172/225 (76.44%), Query Frame = -1 Query: 129 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNYRY 803 K+A +EA+R+W+ NL+ +YY+ G+VVGPHP PI+VR FQ +IG+ET+KQ +EK G PD ++ACVG GSNA G+F+ FI D V+LIGVEA G GL++GKHAA+L KG++G HG+ +++LQD+ GQ+ THSV GL+Y GVGPE ++ R+TG+ + TD+EA+ A+ L RLEGI PALE+SHALA+L+K+ G VVVN SG GDKD+++V+N+ Y Sbjct: 163 KDAINEALRDWITNLQTTYYVIGSVVGPHPYPIIVRNFQKVIGEETKKQILEKEGRLPDYIVACVGGGSNAAGIFYPFI-DSGVKLIGVEAGGEGLETGKHAASLLKGKIGYLHGSKTFVLQDDWGQVQVTHSVSAGLDYSGVGPEHAYWRETGKVLYDAVTDEEALDAFIELSRLEGIIPALESSHALAYLKKI---NIKGKVVVVNLSGRGDKDLESVLNHPY 383
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PSESH (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. phaseolicola GN=trpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.871e-67 Identity = 123/226 (54.42%), Postives = 161/226 (71.24%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A +EA+R+WV N++ ++YL GTV GPHP P MVR+FQ+IIGKET++Q EK G PD L+ACVG GSNA+GLFH F++D V +IGVEA G G+D+ KHAA+L G GV HG +YLLQD +GQI HS+ GL+YPG+GPE +FL + R E+ + TD EA+ A+ + C LEGI PALE +HALA K L + +VV SG GDKD+ TV+N+ Sbjct: 172 GTLKDAMNEALRDWVTNVDDTFYLIGTVAGPHPYPAMVRDFQAIIGKETKEQMQEKEGRLPDSLIACVGGGSNAMGLFHPFLDDASVEIIGVEAGGHGVDTDKHAASLNGGVPGVLHGNRTYLLQDGDGQITDPHSISAGLDYPGIGPEHAFLHEVKRVEYVSITDDEALDAFHQCCLLEGIIPALETAHALAEAMKRATNLRDDHLMVVCLSGRGDKDMQTVMNH 397
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACHK (Tryptophan synthase beta chain OS=Bacillus thuringiensis subsp. konkukian GN=trpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.871e-67 Identity = 120/229 (52.40%), Postives = 167/229 (72.93%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACCQ (Tryptophan synthase beta chain OS=Bacillus cereus (strain Q1) GN=trpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.871e-67 Identity = 120/229 (52.40%), Postives = 167/229 (72.93%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKKDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACC7 (Tryptophan synthase beta chain OS=Bacillus cereus (strain AH187) GN=trpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.871e-67 Identity = 120/229 (52.40%), Postives = 167/229 (72.93%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKKDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACC2 (Tryptophan synthase beta chain OS=Bacillus cereus (strain G9842) GN=trpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.871e-67 Identity = 120/229 (52.40%), Postives = 167/229 (72.93%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKKDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACAN (Tryptophan synthase beta chain OS=Bacillus anthracis GN=trpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.871e-67 Identity = 120/229 (52.40%), Postives = 167/229 (72.93%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACAC (Tryptophan synthase beta chain OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=trpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.871e-67 Identity = 120/229 (52.40%), Postives = 167/229 (72.93%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACAA (Tryptophan synthase beta chain OS=Bacillus anthracis (strain A0248) GN=trpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.871e-67 Identity = 120/229 (52.40%), Postives = 167/229 (72.93%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_STRGG (Tryptophan synthase beta chain OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=trpB PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.361e-67 Identity = 120/223 (53.81%), Postives = 159/223 (71.30%), Query Frame = -1 Query: 135 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 803 K+A +EA R+WV N+++++YL GTV GPHP P MVR+F +IG E R+Q +E+ G PD +ACVG GSNA+GLFH FI DE VRL+G E AG G+++G+HAATL GE G+ HG+ SY+LQD+EGQI +S+ GL+YPG+GPE S+L+D GR E+ TD A+QA + L R EGI PA+E++HALA L L ++VN SG GDKD+DT Y Sbjct: 180 KDAINEAFRDWVANVDRTHYLFGTVAGPHPFPAMVRDFHRVIGVEARRQILERAGRLPDAAVACVGGGSNAIGLFHAFIPDEGVRLVGCEPAGHGVETGEHAATLTAGEPGILHGSRSYVLQDDEGQITEPYSISAGLDYPGIGPEHSYLKDVGRGEYRAVTDDAAMQALRLLSRTEGIIPAIESAHALAGALDLGKELGKDGLILVNLSGRGDKDMDTAARY 402 The following BLAST results are available for this feature:
BLAST of CX043276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043276 ID=CX043276; Name=CX043276; organism=Citrus sinensis; type=EST; length=821bpback to top |