EY665426

Overview
NameEY665426
Unique NameEY665426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1002
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.612e-20
Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 1
Query:    4 VEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIHPG 456
            + +VV ETGWP  G  +E   +V NA+ +N NLI  + + +G P  P   ++TYI+ LY+ED + GP SER++G+  P+ ++ Y + +S  S                          +CV KA   D +L   L++AC QG  +C+ I PG
Sbjct:  260 IPVVVTETGWPSSGGSDEAAATVANAETFNTNLIKRVLNNSGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSSSAALNGSSM----------------FCVAKADADDDKLVDGLNWACGQGRANCAAIQPG 395          

HSP 2 Score: 26.1794 bits (56), Expect = 3.612e-20
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  461 PVFEPNTVITHAAFAMNLY*PKLR 532
            P + PN V +HA+FA N Y  K++
Sbjct:  397 PCYLPNDVKSHASFAFNDYYQKMK 420          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.556e-18
Identity = 42/90 (46.67%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            +VEI+V+E+GWP  G+      ++ENA+ Y  NLI H++  AGTP  PGKS++TY+FA++DE++K G  +E+ FGLF PD  A Y +  +
Sbjct:  257 NVEIIVSESGWPSEGNS---AATIENAQTYYRNLIDHVKRGAGTPKKPGKSIETYLFAMFDENVKKGEITEKHFGLFSPDQRAKYQLNFN 343          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.359e-18
Identity = 42/90 (46.67%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            +VEI+V+E+GWP  G+      ++ENA+ Y  NLI H++S AGTP  PGK+++TY+FA++DE+ K G  +E+ FGLF PD  A Y +  +
Sbjct:  189 NVEIIVSESGWPSEGNS---AATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGDITEKHFGLFSPDQRAKYQLNFN 275          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.359e-18
Identity = 42/90 (46.67%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            +VEI+V+E+GWP  G+      ++ENA+ Y  NLI H++S AGTP  PGK+++TY+FA++DE+ K G  +E+ FGLF PD  A Y +  +
Sbjct:  257 NVEIIVSESGWPSEGNS---AATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGDITEKHFGLFSPDQRAKYQLNFN 343          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.991e-18
Identity = 48/154 (31.17%), Postives = 78/154 (50.65%), Query Frame = 1
Query:    4 VEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMA--GTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQ-GIDCSPIHPG 456
            + + ++ETGWP  GD +E G ++ NA  YN NLI  + +    GTP  PG  + T++F+L++E+ K G  ++R +G+  PD S  YDV  +  +                          WCVP  G ++ +L+ +L  AC+Q    C+ + PG
Sbjct:  274 MRLAISETGWPNFGDIDETGANILNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDVDFTGQTPLTGFNPLPKPTNNVPYKGQV-----WCVPVEGANETELEETLRMACAQSNTTCAALAPG 422          

HSP 2 Score: 23.8682 bits (50), Expect = 8.991e-18
Identity = 8/27 (29.63%), Postives = 18/27 (66.67%), Query Frame = 2
Query:  467 FEPNTVITHAAFAMNLY*PKLRKKPME 547
            +EP ++  HA++A+N Y  + R + ++
Sbjct:  426 YEPVSIYWHASYALNSYWAQFRNQSIQ 452          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.712e-18
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDV 261
            ++EI+V+E+GWP  G P+    ++ENA  Y  NLI H++  AGTP  PG++++TY+FA++DE+ K G  SE+ FGLFKPD    Y +
Sbjct:  250 NIEIIVSESGWPSEGHPSA---TLENAMTYYTNLINHVKGGAGTPKKPGRTIETYLFAMFDENRKDGKPSEQHFGLFKPDQRPKYQL 333          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.268e-17
Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            +VEI+V+E+GWP  G       ++ENA+ Y  NLI H++S AGTP  PGK+++TY+FA++DE+ K G  +E+ FGLF PD  A Y +  +
Sbjct:  237 NVEIIVSESGWPSEGSS---AATIENAQTYYRNLINHVKSGAGTPKKPGKTIETYLFAMFDENDKIGEITEKHFGLFSPDQRAKYQLNFN 323          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13J_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O (Fragment) OS=Nicotiana tabacum GN=PR0 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.164e-17
Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            +VEI+V+E+GWP  G+      ++ENA+ Y  NLI H++  AGTP  PGK+++TY+FA++DE+ K G  +E+ FGLF PD  A Y +  +
Sbjct:   74 NVEIIVSESGWPSEGNS---AATIENAQTYYRNLIDHVKRGAGTPKKPGKTIETYLFAMFDENDKKGEITEKHFGLFSPDQRAKYQLNFN 160          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.820e-17
Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 1
Query:    4 VEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            +EIVV+ETGWP  G    VG SVENAK Y  NLI H+++  G+P  PGK+++TYIFA++DE+ K  PT E+ +GLF PD  + Y+V  +
Sbjct:  257 LEIVVSETGWPTEG---AVGTSVENAKTYVNNLIQHVKN--GSPRRPGKAIETYIFAMFDEN-KKEPTYEKFWGLFHPDRQSKYEVNFN 339          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.832e-16
Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 1
Query:    4 VEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSS 279
            +E+VV+ETGWP  G     G SVENA AY  NL+ H+    GTP  PGK+V+TYIFA+++E+ KP    E++FG+F+PD+S  Y V  + SS
Sbjct:  235 LELVVSETGWPSGG--GGYGASVENAAAYINNLVRHV---GGTPRRPGKAVETYIFAMFNENQKPEGV-EQNFGMFQPDMSQVYHVDFTASS 320          
The following BLAST results are available for this feature:
BLAST of EY665426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
E134_ARATH3.612e-2033.55Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E13L_TOBAC2.556e-1846.67Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13I_TOBAC4.359e-1846.67Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13G_TOBAC4.359e-1846.67Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
EA6_ARATH8.991e-1831.17Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E13A_SOLLC9.712e-1847.13Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E13K_TOBAC1.268e-1746.67Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13J_TOBAC2.164e-1745.56Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13A_ARATH4.820e-1751.69Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E13F_HORVU1.832e-1650.00Putative glucan endo-1,3-beta-glucosidase GVI (Fra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665426 ID=EY665426; Name=EY665426; organism=Citrus sinensis; type=EST; length=1002bp
GATGTCGAGATTGTGGTTGCAGAGACAGGGTGGCCTTACCGCGGAGACCC
GAATGAGGTTGGACCTAGTGTTGAGAATGCCAAGGCCTATAACGGGAACT
TGATTGCTCACCTTAGATCAATGGCTGGAACTCCATTGATGCCTGGAAAA
TCTGTGGATACATATATTTTTGCTCTCTATGATGAGGACTTGAAGCCTGG
CCCTACCTCTGAACGTTCATTCGGGCTCTTCAAGCCAGACCTTTCAGCAG
CATATGATGTTGGTATTTCAAAGAGTAGCCAGACTCCATCAGCTCCAGTG
ACTCCATCAACTCCAAAAACTCCAACGACTCCATCACCAAAACCAACAGC
AGCTGGTTGGTGTGTGCCCAAGGCCGGCATCTCCGATGCACAACTGCAGG
CAAGTCTTGACTATGCCTGCAGCCAAGGCATCGATTGCAGTCCTATCCAC
CCAGGAGGTGCCGGTTTTTGAACCAAATACAGTAATAACACATGCTGCTT
TTGCCATGAATCTCTACTAACCAAAACTCCGCAAAAAACCCATGGAACTG
CCACTTCCTCAAAACGGGAACCCCTCCACATCCCAAAAATCCCAATTTAC
CATGGGAAGGGGCCAACCCAATTGGGGGGACTTTGAAATGGCCGAAACCA
AATTTCCCAATTTGGAAGGTTTAAAATAAGGGGAAAGGTTAAGGGAAAAA
AAAGAGGAATGAAATCTAAGGGGGTCCCATTTTTTATAAAAAAAAGTTTT
TAATTTGAAAAGGGGTTTCCCCCCCCCCAAAATAAAAAGGCACCGGGGAA
AAAAACCCTTTTCCTTTCTCTCTCCCTTTTTTTTCTCTTTTTTTATTAAA
AAAAATAATATTGTTGGGCCCCCTCCAATAGGAAAAAAAAAAAAAAATTT
ATTGTGGGGGGGTTAAAAAAAAAAAATTGTGTTTTTTTTATAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAGAGGGGGCGGGCGCGCCGCCCGCCCCCC
CA
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