EY665426

Overview
NameEY665426
Unique NameEY665426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1002
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13C_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41A PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.392e-16
Identity = 40/92 (43.48%), Postives = 62/92 (67.39%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKS 276
            +VEI+V+E+GWP  G+      ++ENA+ Y  NL+ H++  AGTP  PG+ V+TY+FA++DE+ K G  +E+ FGLF P+ +A Y +    S
Sbjct:  261 NVEIIVSESGWPSEGNS---AATIENAQTYYRNLVNHVKGGAGTPKKPGRIVETYLFAMFDENEKNGEVTEKHFGLFYPNRTAKYQLNFMYS 349          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13D_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41B PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.124e-16
Identity = 39/92 (42.39%), Postives = 62/92 (67.39%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKS 276
            +VEI+V+E+GWP  G+      ++ENA+ Y  NL+ H++  AGTP  PG+ ++TY+FA++DE+ K G  +E+ FGLF P+ +A Y +    S
Sbjct:  261 NVEIIVSESGWPSEGNS---AATIENAQTYYRNLVNHVKGGAGTPKKPGRIIETYLFAMFDENEKQGEITEKHFGLFYPNRAAKYQLNFMYS 349          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.005e-14
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAY 255
            +V +VV+E+GWP  G     G SVENA+ YN  LI H+RS  GTP  PG +++TYIFA+++E+ KPG   ER+FGLF P+    Y
Sbjct:  232 NVRVVVSESGWPSAGG---FGASVENARNYNQGLIDHIRS--GTPKRPG-AIETYIFAMFNENRKPGDEVERNFGLFFPNKQPVY 310          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.508e-14
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            +V +VV+E+GWP  G       +  NA+ YN NLI H+    GTP  PG  ++TYIFA+++ED K G  SER FGLF PD S  Y +  S
Sbjct:  252 NVPVVVSESGWPSAGGD---AATAANAQTYNQNLINHVGQ--GTPKRPGP-IETYIFAMFNEDQKTGAESERHFGLFNPDKSPVYPINFS 335          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 1
Query:    4 VEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            +EIVV+E+GWP  G       S++NA+ YN NLI+H++   G+P  P   ++TY+FAL+DED K  P  E+ FGLF  ++   Y +  +
Sbjct:  256 LEIVVSESGWPSAGAGQLT--SIDNARTYNNNLISHVKG--GSPKRPSGPIETYVFALFDEDQK-DPEIEKHFGLFSANMQPKYQISFN 339          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.605e-12
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    4 VEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDV 261
            V +VV+E+GWP     +    + +NA+AYN  LI H+    GTP  PG +++TYIFA+++E+ K G  +E+ FGLF PD S AY +
Sbjct:  228 VRVVVSESGWP---SASGFAATADNARAYNQGLIDHVGG--GTPKRPG-ALETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPI 307          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.669e-12
Identity = 36/86 (41.86%), Postives = 60/86 (69.77%), Query Frame = 1
Query:    4 VEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDV 261
            V++V++E+GWP        G + +NA+AYN  LI H+ +  G+P   G ++++YIFA+++E+LK G   E++FGLFKP++S AY +
Sbjct:  249 VKVVISESGWP---SDQGFGATAQNARAYNQGLINHVGN--GSPKKAG-ALESYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 328          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13B_HORVU (Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.669e-12
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    4 VEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDV 261
            V++VV+E+GWP  G       S  NA+ YN  LI H+    GTP    ++++TYIFA+++E+ K G  +ERSFGLF PD S AY++
Sbjct:  253 VKVVVSESGWPSAGG---FAASAGNARTYNQGLINHVGG--GTP-KKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNI 332          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=GSVIVT00022223001 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.358e-11
Identity = 36/90 (40.00%), Postives = 57/90 (63.33%), Query Frame = 1
Query:    1 DVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            +++IVV+E+GWP  G       +V+NA+ Y  NLI H++   GTP   G +++TY+FA++DE+ K G  +E+ FGLF P   + Y +  S
Sbjct:  203 NLKIVVSESGWPSEGG---TAATVDNARTYYKNLINHVKG--GTPRKSG-AIETYLFAMFDENQKTGLETEKHFGLFTPSQESKYQISFS 286          
BLAST of EY665426 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.026e-11
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 1
Query:    4 VEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 270
            V +VV+E+GWP  G       + ENA+AYN  LI H+    GTP  PG  ++ Y+FA+++E+ KPG  +ER FGLF P+    Y +  +
Sbjct:  227 VRVVVSESGWPSAGG---FAATPENARAYNQGLIDHVAH--GTPKKPGH-MEAYVFAMFNENQKPGLETERHFGLFYPNKRPVYHINFA 309          
The following BLAST results are available for this feature:
BLAST of EY665426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
E13C_TOBAC2.392e-1643.48Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13D_TOBAC3.124e-1642.39Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13E_HORVU1.005e-1450.59Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vul... [more]
E13B_MAIZE8.508e-1446.67Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E13H_TOBAC1.229e-1241.57Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13A_HORVU1.605e-1244.19Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vul... [more]
E13C_HORVU4.669e-1241.86Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]
E13B_HORVU4.669e-1245.35Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vu... [more]
E13B_VITVI1.358e-1140.00Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera... [more]
E13D_HORVU3.026e-1141.57Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665426 ID=EY665426; Name=EY665426; organism=Citrus sinensis; type=EST; length=1002bp
GATGTCGAGATTGTGGTTGCAGAGACAGGGTGGCCTTACCGCGGAGACCC
GAATGAGGTTGGACCTAGTGTTGAGAATGCCAAGGCCTATAACGGGAACT
TGATTGCTCACCTTAGATCAATGGCTGGAACTCCATTGATGCCTGGAAAA
TCTGTGGATACATATATTTTTGCTCTCTATGATGAGGACTTGAAGCCTGG
CCCTACCTCTGAACGTTCATTCGGGCTCTTCAAGCCAGACCTTTCAGCAG
CATATGATGTTGGTATTTCAAAGAGTAGCCAGACTCCATCAGCTCCAGTG
ACTCCATCAACTCCAAAAACTCCAACGACTCCATCACCAAAACCAACAGC
AGCTGGTTGGTGTGTGCCCAAGGCCGGCATCTCCGATGCACAACTGCAGG
CAAGTCTTGACTATGCCTGCAGCCAAGGCATCGATTGCAGTCCTATCCAC
CCAGGAGGTGCCGGTTTTTGAACCAAATACAGTAATAACACATGCTGCTT
TTGCCATGAATCTCTACTAACCAAAACTCCGCAAAAAACCCATGGAACTG
CCACTTCCTCAAAACGGGAACCCCTCCACATCCCAAAAATCCCAATTTAC
CATGGGAAGGGGCCAACCCAATTGGGGGGACTTTGAAATGGCCGAAACCA
AATTTCCCAATTTGGAAGGTTTAAAATAAGGGGAAAGGTTAAGGGAAAAA
AAAGAGGAATGAAATCTAAGGGGGTCCCATTTTTTATAAAAAAAAGTTTT
TAATTTGAAAAGGGGTTTCCCCCCCCCCAAAATAAAAAGGCACCGGGGAA
AAAAACCCTTTTCCTTTCTCTCTCCCTTTTTTTTCTCTTTTTTTATTAAA
AAAAATAATATTGTTGGGCCCCCTCCAATAGGAAAAAAAAAAAAAAATTT
ATTGTGGGGGGGTTAAAAAAAAAAAATTGTGTTTTTTTTATAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAGAGGGGGCGGGCGCGCCGCCCGCCCCCC
CA
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