CV885630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.451e-60 Identity = 115/212 (54.25%), Postives = 142/212 (66.98%), Query Frame = -2 Query: 314 HVGNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVTKRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 949 H G SDGDAV++F ++W+DH +LS DGLIDAI GSTAITISN H+++HDK +LLG +D++T+DK MQVT+AFN F +GLVQRMP R G+ HVVNNDY WEMYAIGG PTI SQGNRF A + + KEVTK D + W WRSEGD+ LNGAYF SG + Y + P + V IT AG L C+ G++C Sbjct: 199 HTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRESG-AEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 409
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.475e-60 Identity = 115/210 (54.76%), Postives = 145/210 (69.05%), Query Frame = -2 Query: 314 GNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVTKRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 943 G RG +DGDA+++F SS+IW+DH +LS DGL+D + GSTAITISN H ++HD+ +LLG D++T DK MQVTVA+N F +GL+QRMP R G+ HVVNNDY W+MYAIGG PTI SQGNRF A N +AKEVTKR+D E W WRSE D+ +NGA+F SG+ L+ KPA + V IT AGAL C+ G+ C Sbjct: 244 GFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRSEKDLLVNGAFFTPSGEGASGDSQTLSLPAKPA--SMVDAITASAGALSCRRGKPC 451
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 5.514e-60 Identity = 117/213 (54.93%), Postives = 138/213 (64.79%), Query Frame = -2 Query: 314 HVGNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVTKRMDCSPEEGNGWIWRSEGDVFLNGAYFNASG-DPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 949 H G SDGD +S+F NIW+DH +LS DGLIDAI GSTAITISN + ++HDK +LLG +D+FT+DK MQVTVAFN F +GLVQRMP R G+ HVVNNDY WEMYAIGG PTI SQGNRF A + K KEVTK D + W WRSEGD+ LNGAYF +G Y + P + V IT AG + CK G +C Sbjct: 192 HSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFRQTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC 404
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 231.106 bits (588), Expect = 7.202e-60 Identity = 114/212 (53.77%), Postives = 143/212 (67.45%), Query Frame = -2 Query: 314 HVGNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVTKRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 949 H G R +DGDA+S+F SS++W+DH +LS DGL+DA+ GSTAITISN HL++H++ +LLG +D++ DK MQVT+A+N F GL+QRMP R G+ HVVNNDY WEMYAIGG PTI SQGNR+ A N AKEVTKR+D GW WRSEGD+ NGAYF +SG Y + + V IT AGAL C+ G+QC Sbjct: 219 HFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASG-SYARASSLSAKSSSLVGHITSDAGALPCRRGRQC 429
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 9.406e-60 Identity = 114/212 (53.77%), Postives = 146/212 (68.87%), Query Frame = -2 Query: 314 HVGNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVTKRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 949 H G R +DGDAVS+F SS+IW+DH +LS DGL+DA+ GSTAIT+SN H ++H++ +LLG +D++T+DK MQVT+A+N F +GLVQRMP R G+ HVVNNDY WEMYAIGG PTI SQGNR+ A ++ AKEVTKR++ E W WRSEGD+ LNGA+F SG Y + P + V IT AGAL C+ G+ C Sbjct: 260 HFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSG-AGASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC 470
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 1.228e-59 Identity = 112/214 (52.34%), Postives = 148/214 (69.16%), Query Frame = -2 Query: 314 HVGNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVT--KRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 949 H+G RG +GDA+S+F+S +IW+DH+++S+A DGLIDA+ GST ITISNCH ++H+K +L GA D ED+ M++T+A+N F K L QRMP RFGF H+VNNDY WE YAIGG G TI+SQGNRF A D KEVT ++ S EE W W ++GD F NGA F SGD K + ++I+P P ++V +TKF+GAL CK + C Sbjct: 185 HLGLRGADEGDAISIFNSHDIWIDHISMSRATDGLIDAVAGSTNITISNCHFTDHEKVMLFGANDHAEEDRGMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDKLLVKEVTYREKSTSSVEEWMKWTWITDGDDFENGATFTPSGDQNLLSKIDHLNLIQPEPSSKVGLLTKFSGALSCKIRRPC 398
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 1.228e-59 Identity = 113/212 (53.30%), Postives = 141/212 (66.51%), Query Frame = -2 Query: 314 HVGNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVTKRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 949 H G R SDGD VS+F S++W+DH + S +DGLIDAI GSTAIT+SN H+++HDK +LLG +DT++ DK MQVT+AFN F +GLVQRMP R G+ HVVNNDY WEMYAIGG PTI SQGNRF A + + +KEVTK D E W WRS GD+ LNGA+F SG Y + P + V +T +GAL C+ G +C Sbjct: 198 HFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASS-SYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 2.095e-59 Identity = 112/214 (52.34%), Postives = 145/214 (67.76%), Query Frame = -2 Query: 314 HVGNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVT--KRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 949 HVG RG +GD +S+FSS +IW+DH+++S+A DGLIDA+ ST ITISNCH ++H+K +L GA D + DK M++T+A+N F K L QRMP RFGF H+VNNDY WE YAIGG G TI+SQGNRF A D KEVT +++ S E W W S+GD NGA F SGD K + ++IKP P ++V +TKF+GAL C G+ C Sbjct: 184 HVGLRGSDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEKVMLFGANDHYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGATFTPSGDQNLLDKIDHLNLIKPEPSSKVGILTKFSGALSCVKGRPC 397
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 5.161e-58 Identity = 110/212 (51.89%), Postives = 143/212 (67.45%), Query Frame = -2 Query: 314 HVGNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVTKRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 949 H G R +DGDA+S+F SS+IW+DH +LS DGL+DA+ STAIT+SN ++H++ +LLG +D++T DK MQVT+A+N F +GL+QRMP R G+ HVVNNDY WEMYAIGG GPTI SQGNRF A N AKEVTKR + W WRSEGD+FLNGA+F SG Y + + V +T ++GAL C+ G++C Sbjct: 206 HYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEGDLFLNGAFFTRSG-AGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416
BLAST of CV885630 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 5.161e-58 Identity = 112/212 (52.83%), Postives = 143/212 (67.45%), Query Frame = -2 Query: 314 HVGNRGPSDGDAVSVFSSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTVAFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAKEVTKRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRITKFAGALVCKPGQQC 949 H G R +DGDA+S+F SS+IW+DH +LS DGLIDAI GSTAITISN ++++H++ +L+G +D++T DK MQVT+A+N F +GL+QRMP R G+ HVVNNDY W MYAIGG PTI SQGNRF A N AKEVTKR+ E W WRS+GD+ LNGAYF SG Y + P + V +T +GAL C+ G +C Sbjct: 230 HYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAPGNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSG-AAAPASYARASSLGAKPASVVSMLTYSSGALKCRIGMRC 440 The following BLAST results are available for this feature:
BLAST of CV885630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885630 ID=CV885630; Name=CV885630; organism=Citrus sinensis; type=EST; length=950bpback to top |